BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.4934.p (283 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777179.1| sn-glycerol-3-phosphate ABC transporter perm... 470 e-130 ref|YP_004751858.1| SN-glycerol-3-phosphate transport system per... 409 e-112 ref|NP_880051.1| sn-glycerol-3-phosphate transport system permea... 363 2e-98 ref|YP_003979354.1| sn-glycerol-3-phosphate transporter permease... 362 3e-98 gb|EGP43777.1| sn-glycerol-3-phosphate transport system permease... 362 5e-98 >ref|YP_003777179.1| sn-glycerol-3-phosphate ABC transporter permease [Herbaspirillum seropedicae SmR1] gb|ADJ65271.1| ABC-type sn-glycerol-3-phosphate transport system, permease component protein [Herbaspirillum seropedicae SmR1] Length = 283 Score = 470 bits (1209), Expect = e-130, Method: Composition-based stats. Identities = 277/283 (97%), Positives = 281/283 (99%) Query: 1 MIERRPVLDFLSHVVLVLGVLIVFFPLYVAFVASTQTAEQSALSPLSLVPGGEFINNYSA 60 MIERRP+LDFLSHVVLVLGVLIVFFPLYVAFVASTQ+AEQSALSPLSL PGGEF+NNYS Sbjct: 1 MIERRPILDFLSHVVLVLGVLIVFFPLYVAFVASTQSAEQSALSPLSLAPGGEFMNNYST 60 Query: 61 VLFKGAAGQVTAPPVLNMLWVSLATALIIAIGKISISMLSAFAIVYFRFPGRGLFFWMIF 120 VLFKGAAGQVTAPPVL+MLWVSLATALIIAIGKISISMLSAFAIVYFRFPGRGLFFWMIF Sbjct: 61 VLFKGAAGQVTAPPVLHMLWVSLATALIIAIGKISISMLSAFAIVYFRFPGRGLFFWMIF 120 Query: 121 VTLMLPVEVRITPTYQVVSDLGMLNSYAGLSVPLIASATATFLFRQFFLTVPDELAEAAR 180 VTLMLPVEVRITPTYQVVSDLGMLNSYAGLSVPLIASATATFLFRQFFLTVPDELAEAAR Sbjct: 121 VTLMLPVEVRITPTYQVVSDLGMLNSYAGLSVPLIASATATFLFRQFFLTVPDELAEAAR 180 Query: 181 IDGAGPLRFLKDVLWPLSRTNVIALFVIMFIYGWNQYLWPLIIATDTSMYPIGIGIKTLI 240 IDGAGPLRFLKDVLWPLSRTNVIALFVIMFIYGWNQYLWPLIIATDTSMYPIGIGIKTLI Sbjct: 181 IDGAGPLRFLKDVLWPLSRTNVIALFVIMFIYGWNQYLWPLIIATDTSMYPIGIGIKTLI 240 Query: 241 SGGDSAVEWNLVMATMILAMLPPGLVVVVMQKWFVKGLVDSEK 283 SGGDSAVEWNLVMATMILAMLPPGLVVVVMQKWFVKGLVDSEK Sbjct: 241 SGGDSAVEWNLVMATMILAMLPPGLVVVVMQKWFVKGLVDSEK 283 >ref|YP_004751858.1| SN-glycerol-3-phosphate transport system permease [Collimonas fungivorans Ter331] gb|AEK61035.1| SN-glycerol-3-phosphate transport system permease protein [Collimonas fungivorans Ter331] Length = 283 Score = 409 bits (1051), Expect = e-112, Method: Composition-based stats. Identities = 234/283 (82%), Positives = 262/283 (92%) Query: 1 MIERRPVLDFLSHVVLVLGVLIVFFPLYVAFVASTQTAEQSALSPLSLVPGGEFINNYSA 60 MIERRP+LD +SH+VL+LGV+I+ FPLYVAFVASTQTA+++A +PLSL+PG + NY A Sbjct: 1 MIERRPILDMVSHLVLILGVIIIAFPLYVAFVASTQTAQEAAAAPLSLLPGSHLVENYGA 60 Query: 61 VLFKGAAGQVTAPPVLNMLWVSLATALIIAIGKISISMLSAFAIVYFRFPGRGLFFWMIF 120 +L KGA+G V+APPV ML VSL +AL IAIGKISISMLSAFA+VYFRFPGR LFFWMIF Sbjct: 61 LLTKGASGNVSAPPVARMLLVSLISALTIAIGKISISMLSAFAMVYFRFPGRSLFFWMIF 120 Query: 121 VTLMLPVEVRITPTYQVVSDLGMLNSYAGLSVPLIASATATFLFRQFFLTVPDELAEAAR 180 +TLMLPVEVRITPTYQVVSD MLNSYAGL++PLIASATATFLFRQFFLTVPDELAEAAR Sbjct: 121 MTLMLPVEVRITPTYQVVSDFHMLNSYAGLTIPLIASATATFLFRQFFLTVPDELAEAAR 180 Query: 181 IDGAGPLRFLKDVLWPLSRTNVIALFVIMFIYGWNQYLWPLIIATDTSMYPIGIGIKTLI 240 IDGAGPLRF KDV+WPLSRTN+IALFVIMFIYGWNQYLWPL+IAT+ MYPIGIGIKTLI Sbjct: 181 IDGAGPLRFFKDVIWPLSRTNIIALFVIMFIYGWNQYLWPLMIATNQDMYPIGIGIKTLI 240 Query: 241 SGGDSAVEWNLVMATMILAMLPPGLVVVVMQKWFVKGLVDSEK 283 +GGDSAVEWN+VMAT++LAMLPPGLVVVVMQKWFVKGLVDSEK Sbjct: 241 AGGDSAVEWNMVMATLVLAMLPPGLVVVVMQKWFVKGLVDSEK 283 >ref|NP_880051.1| sn-glycerol-3-phosphate transport system permease protein [Bordetella pertussis Tohama I] ref|NP_885137.1| sn-glycerol-3-phosphate transport system permease protein [Bordetella parapertussis 12822] ref|NP_889450.1| sn-glycerol-3-phosphate ABC transporter permease [Bordetella bronchiseptica RB50] emb|CAE41579.1| sn-glycerol-3-phosphate transport system permease protein [Bordetella pertussis Tohama I] emb|CAE38238.1| sn-glycerol-3-phosphate transport system permease protein [Bordetella parapertussis] emb|CAE33406.1| sn-glycerol-3-phosphate transport system permease protein [Bordetella bronchiseptica RB50] gb|AEE66670.1| sn-glycerol-3-phosphate transport system permease protein [Bordetella pertussis CS] Length = 283 Score = 363 bits (931), Expect = 2e-98, Method: Composition-based stats. Identities = 200/283 (70%), Positives = 238/283 (84%) Query: 1 MIERRPVLDFLSHVVLVLGVLIVFFPLYVAFVASTQTAEQSALSPLSLVPGGEFINNYSA 60 M+ERRP LD L+H +L+ GV +V FP+YV FVASTQTA++ A +P+SL+PG F++NY Sbjct: 1 MVERRPWLDILAHFILLCGVALVAFPIYVTFVASTQTAQEVASAPMSLIPGKHFVDNYMQ 60 Query: 61 VLFKGAAGQVTAPPVLNMLWVSLATALIIAIGKISISMLSAFAIVYFRFPGRGLFFWMIF 120 LF G+ G PV M++VSL AL I++GKI+IS+LSAFA+VYFRFPGR FFWMIF Sbjct: 61 ALFAGSGGGSYGAPVGRMMYVSLIMALAISLGKIAISLLSAFAVVYFRFPGRMFFFWMIF 120 Query: 121 VTLMLPVEVRITPTYQVVSDLGMLNSYAGLSVPLIASATATFLFRQFFLTVPDELAEAAR 180 VTLMLPVEVRI PTY+VV+DLG+LNSYAGL++PLIASATATFLFRQFFLTVPDEL EAAR Sbjct: 121 VTLMLPVEVRIAPTYKVVADLGLLNSYAGLTLPLIASATATFLFRQFFLTVPDELVEAAR 180 Query: 181 IDGAGPLRFLKDVLWPLSRTNVIALFVIMFIYGWNQYLWPLIIATDTSMYPIGIGIKTLI 240 IDGAGP+RF +DVL PLSRT++ ALFVI FIYGWNQYLWPL+I T MYP+ IGIK +I Sbjct: 181 IDGAGPMRFFRDVLLPLSRTSIAALFVIQFIYGWNQYLWPLLITTQEDMYPVVIGIKRMI 240 Query: 241 SGGDSAVEWNLVMATMILAMLPPGLVVVVMQKWFVKGLVDSEK 283 SGGDS EWN+ MAT ILAM+PP LVV++MQKWFVKGLVD+EK Sbjct: 241 SGGDSVTEWNITMATAILAMIPPALVVILMQKWFVKGLVDTEK 283 >ref|YP_003979354.1| sn-glycerol-3-phosphate transporter permease protein UgpE [Achromobacter xylosoxidans A8] gb|ADP16639.1| sn-glycerol-3-phosphate transport system permease protein UgpE [Achromobacter xylosoxidans A8] Length = 283 Score = 362 bits (930), Expect = 3e-98, Method: Composition-based stats. Identities = 200/283 (70%), Positives = 241/283 (85%) Query: 1 MIERRPVLDFLSHVVLVLGVLIVFFPLYVAFVASTQTAEQSALSPLSLVPGGEFINNYSA 60 M+ERRP LD L+HV+L+ GV +V FPLYV FVASTQTA++ A +P+SL+PG F++NY Sbjct: 1 MVERRPWLDILAHVILLCGVAMVAFPLYVTFVASTQTAQEVASAPMSLIPGKHFVDNYMQ 60 Query: 61 VLFKGAAGQVTAPPVLNMLWVSLATALIIAIGKISISMLSAFAIVYFRFPGRGLFFWMIF 120 LF G++G + PV M++VSL AL I+IGKI+IS+LSAFA+VYFRFPGR FFWMIF Sbjct: 61 ALFGGSSGGSSGAPVGRMMYVSLIMALAISIGKIAISLLSAFAVVYFRFPGRMFFFWMIF 120 Query: 121 VTLMLPVEVRITPTYQVVSDLGMLNSYAGLSVPLIASATATFLFRQFFLTVPDELAEAAR 180 VTLMLPVEVRI PTY+VV+DLG+LNSYAGL++PLIASATATFLFRQFFLTVPDEL EAAR Sbjct: 121 VTLMLPVEVRIAPTYKVVADLGLLNSYAGLTLPLIASATATFLFRQFFLTVPDELIEAAR 180 Query: 181 IDGAGPLRFLKDVLWPLSRTNVIALFVIMFIYGWNQYLWPLIIATDTSMYPIGIGIKTLI 240 IDGAGP+RF +DVL PLS+T++ ALFVI FIYGWNQYLWPL++ T MYP+ IGIK +I Sbjct: 181 IDGAGPVRFFRDVLLPLSKTSIAALFVIQFIYGWNQYLWPLLVTTQEDMYPVVIGIKRMI 240 Query: 241 SGGDSAVEWNLVMATMILAMLPPGLVVVVMQKWFVKGLVDSEK 283 SGGDS EWN+ MAT +LAM+PP LVV++MQKWFVKGLVD+EK Sbjct: 241 SGGDSVTEWNITMATAMLAMIPPALVVILMQKWFVKGLVDTEK 283 >gb|EGP43777.1| sn-glycerol-3-phosphate transport system permease protein [Achromobacter xylosoxidans AXX-A] Length = 283 Score = 362 bits (928), Expect = 5e-98, Method: Composition-based stats. Identities = 200/283 (70%), Positives = 242/283 (85%) Query: 1 MIERRPVLDFLSHVVLVLGVLIVFFPLYVAFVASTQTAEQSALSPLSLVPGGEFINNYSA 60 M+ERRP LD L+HV+L+ GV +V FPLYV FVASTQTA++ A +P+SL+PG F++NY Sbjct: 1 MVERRPWLDILAHVILLCGVAMVAFPLYVTFVASTQTAQEVASAPMSLIPGPHFVDNYMQ 60 Query: 61 VLFKGAAGQVTAPPVLNMLWVSLATALIIAIGKISISMLSAFAIVYFRFPGRGLFFWMIF 120 LF G++G + PV M++VSL AL+I+IGKI+IS+LSAFA+VYFRFPGR FFWMIF Sbjct: 61 ALFGGSSGGSSGAPVGRMMYVSLIMALVISIGKIAISLLSAFAVVYFRFPGRMFFFWMIF 120 Query: 121 VTLMLPVEVRITPTYQVVSDLGMLNSYAGLSVPLIASATATFLFRQFFLTVPDELAEAAR 180 VTLMLPVEVRI PTY+VV+DLG+LNSYAGL++PLIASATATFLFRQFFLTVPDEL EAAR Sbjct: 121 VTLMLPVEVRIAPTYKVVADLGLLNSYAGLTLPLIASATATFLFRQFFLTVPDELIEAAR 180 Query: 181 IDGAGPLRFLKDVLWPLSRTNVIALFVIMFIYGWNQYLWPLIIATDTSMYPIGIGIKTLI 240 IDGAGP+RF +DVL PLS+T++ ALFVI FIYGWNQYLWPL++ T MYP+ IGIK +I Sbjct: 181 IDGAGPVRFFRDVLLPLSKTSIAALFVIQFIYGWNQYLWPLLVTTQEDMYPVVIGIKRMI 240 Query: 241 SGGDSAVEWNLVMATMILAMLPPGLVVVVMQKWFVKGLVDSEK 283 SGGDS EWN+ MAT +LAM+PP LVV++MQKWFVKGLVD+EK Sbjct: 241 SGGDSVTEWNITMATAMLAMIPPALVVILMQKWFVKGLVDTEK 283