BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.4932.p (315 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777177.1| LysR family transcription regulator protein ... 605 e-171 ref|YP_004751417.1| hydrogen peroxide-inducible genes activator ... 526 e-147 ref|YP_001352038.1| OxyR hydrogen peroxide-inducible genes activ... 511 e-143 ref|YP_001098656.1| LysR family transcriptional regulator [Hermi... 489 e-136 ref|ZP_08275315.1| Hydrogen peroxide-inducible genes activator [... 475 e-132 >ref|YP_003777177.1| LysR family transcription regulator protein [Herbaspirillum seropedicae SmR1] gb|ADJ65269.1| LysR family transcription regulator protein [Herbaspirillum seropedicae SmR1] Length = 315 Score = 605 bits (1560), Expect = e-171, Method: Composition-based stats. Identities = 307/314 (97%), Positives = 310/314 (98%) Query: 1 MTLTELKYIVAVAREKHFGHAAEACFVAQPTLSVAIKKLEDELGVVIFERGGTEVSVTPL 60 MTLTELKYIVAVAREKHFGHAAEACFVAQPTLSVAIKKLEDELGVVIFERGGTEVSVTPL Sbjct: 1 MTLTELKYIVAVAREKHFGHAAEACFVAQPTLSVAIKKLEDELGVVIFERGGTEVSVTPL 60 Query: 61 GAQIVAQAERVLEQTAAIKEIANQNKDPLSGPLRLGIIYTIGPYLLPSLVKTMIERVPQM 120 GAQIVAQAERVLEQTAAIKEIANQNKDPLSGPLRLGIIYTIGPYLLPSLVKTMIERVPQM Sbjct: 61 GAQIVAQAERVLEQTAAIKEIANQNKDPLSGPLRLGIIYTIGPYLLPSLVKTMIERVPQM 120 Query: 121 PLILQENFTTRLIELLRQGELDAAIMALPFPEHGLNVMPLYDEEFMVALPRQHKWAERKE 180 PLILQENFTTRLIELLRQGELDAAIMALPFPEHGLNV+PLYDEEFMVALPRQHKWAERKE Sbjct: 121 PLILQENFTTRLIELLRQGELDAAIMALPFPEHGLNVLPLYDEEFMVALPRQHKWAERKE 180 Query: 181 IDARELKSETMLLLGNGHCFRDQVLEVCPEMSRFSTNGDGIARTFEGSSLETIRHMVSSG 240 IDARELKSETMLLLGNGHCFRDQVLEVCPEMSRFSTNGDGIARTFEGSSLETIRHMVSSG Sbjct: 181 IDARELKSETMLLLGNGHCFRDQVLEVCPEMSRFSTNGDGIARTFEGSSLETIRHMVSSG 240 Query: 241 IGVTVLPRASISDADNRDGMVRYVPFVAPAPSRRVVIAWRKSFTRQAAIDAVHQAVLACK 300 IGVTVLPRASI D D RDGMVRYVPFVAPAPSRRVVIAWRKSFTRQAAIDAVHQAVLACK Sbjct: 241 IGVTVLPRASIPDVDTRDGMVRYVPFVAPAPSRRVVIAWRKSFTRQAAIDAVHQAVLACK 300 Query: 301 LNGVQMLTNETVTT 314 LNGVQMLT+ET +T Sbjct: 301 LNGVQMLTDETAST 314 >ref|YP_004751417.1| hydrogen peroxide-inducible genes activator [Collimonas fungivorans Ter331] gb|AEK60594.1| Hydrogen peroxide-inducible genes activator [Collimonas fungivorans Ter331] Length = 347 Score = 526 bits (1354), Expect = e-147, Method: Composition-based stats. Identities = 259/307 (84%), Positives = 279/307 (90%) Query: 1 MTLTELKYIVAVAREKHFGHAAEACFVAQPTLSVAIKKLEDELGVVIFERGGTEVSVTPL 60 MTLTELKYIVAVAR KHFGHAAEACFVAQPTLSVAIKKLEDELGVVIFERGGTE+SVTPL Sbjct: 33 MTLTELKYIVAVARVKHFGHAAEACFVAQPTLSVAIKKLEDELGVVIFERGGTEISVTPL 92 Query: 61 GAQIVAQAERVLEQTAAIKEIANQNKDPLSGPLRLGIIYTIGPYLLPSLVKTMIERVPQM 120 GAQIVAQAERVLEQTA I+EIANQNKDPL+GPLRLGIIYT+GPYLLP LVKTMIE+VPQM Sbjct: 93 GAQIVAQAERVLEQTATIREIANQNKDPLAGPLRLGIIYTVGPYLLPPLVKTMIEQVPQM 152 Query: 121 PLILQENFTTRLIELLRQGELDAAIMALPFPEHGLNVMPLYDEEFMVALPRQHKWAERKE 180 PL+LQENFT RL+ELLRQGELDAAI+ALPFPEHGL V PLYDE F+VALP+ H WA R Sbjct: 153 PLVLQENFTVRLLELLRQGELDAAIIALPFPEHGLMVQPLYDEPFVVALPKHHAWANRSS 212 Query: 181 IDARELKSETMLLLGNGHCFRDQVLEVCPEMSRFSTNGDGIARTFEGSSLETIRHMVSSG 240 I A++LKSETMLLLGNGHCFRDQVLEVCPEMSRFST GDGIARTFEGSSLETIRHMV+SG Sbjct: 213 ISAQDLKSETMLLLGNGHCFRDQVLEVCPEMSRFSTAGDGIARTFEGSSLETIRHMVASG 272 Query: 241 IGVTVLPRASISDADNRDGMVRYVPFVAPAPSRRVVIAWRKSFTRQAAIDAVHQAVLACK 300 IG+TVLP AS+ D D +DGM+RYVPF P PSRRVVI WRKSFTR AAI+AV +AVL C Sbjct: 273 IGITVLPLASVPDLDAKDGMLRYVPFTDPEPSRRVVIVWRKSFTRHAAIEAVQKAVLDCG 332 Query: 301 LNGVQML 307 L GV +L Sbjct: 333 LKGVTLL 339 >ref|YP_001352038.1| OxyR hydrogen peroxide-inducible genes activator [Janthinobacterium sp. Marseille] gb|ABR88853.1| OxyR hydrogen peroxide-inducible genes activator [Janthinobacterium sp. Marseille] Length = 331 Score = 511 bits (1315), Expect = e-143, Method: Composition-based stats. Identities = 251/315 (79%), Positives = 282/315 (89%) Query: 1 MTLTELKYIVAVAREKHFGHAAEACFVAQPTLSVAIKKLEDELGVVIFERGGTEVSVTPL 60 MTLTELKYIVAVAREKHFGHAAEACFVAQPTLSVAIKKLEDELGV +FERGG+E+S+TPL Sbjct: 17 MTLTELKYIVAVAREKHFGHAAEACFVAQPTLSVAIKKLEDELGVTLFERGGSEISMTPL 76 Query: 61 GAQIVAQAERVLEQTAAIKEIANQNKDPLSGPLRLGIIYTIGPYLLPSLVKTMIERVPQM 120 GAQIVAQAERVLEQTAAIKEIA QNKDPL GP RLGIIYTI PYLLP LVKT+IERVPQM Sbjct: 77 GAQIVAQAERVLEQTAAIKEIAKQNKDPLVGPFRLGIIYTIAPYLLPPLVKTIIERVPQM 136 Query: 121 PLILQENFTTRLIELLRQGELDAAIMALPFPEHGLNVMPLYDEEFMVALPRQHKWAERKE 180 PL+LQENFT +L+ELLRQGELDAAI+ALPFP+ GL V P+YDE F+VA+P+ HKWA R Sbjct: 137 PLVLQENFTVKLLELLRQGELDAAIVALPFPDQGLLVQPVYDEPFVVAVPKHHKWANRDS 196 Query: 181 IDARELKSETMLLLGNGHCFRDQVLEVCPEMSRFSTNGDGIARTFEGSSLETIRHMVSSG 240 + +LKSETMLLLGNGHCFRDQVLEVCPEMSRFST+GDGIARTFEGSSLETIRHMV+SG Sbjct: 197 VSTDDLKSETMLLLGNGHCFRDQVLEVCPEMSRFSTSGDGIARTFEGSSLETIRHMVASG 256 Query: 241 IGVTVLPRASISDADNRDGMVRYVPFVAPAPSRRVVIAWRKSFTRQAAIDAVHQAVLACK 300 IG+TVLP+ASI D +DGM+RY+PF P PSRRVV+ WRKSFTR AAI+AV QA+L+C Sbjct: 257 IGITVLPQASIPDMQAKDGMLRYIPFTQPGPSRRVVLVWRKSFTRGAAIEAVRQALLSCD 316 Query: 301 LNGVQMLTNETVTTA 315 L+GV ML +E ++ A Sbjct: 317 LHGVTMLPDEPLSEA 331 >ref|YP_001098656.1| LysR family transcriptional regulator [Herminiimonas arsenicoxydans] emb|CAL60527.1| putative LysR-family transcriptional regulator [Herminiimonas arsenicoxydans] Length = 315 Score = 489 bits (1260), Expect = e-136, Method: Composition-based stats. Identities = 243/315 (77%), Positives = 273/315 (86%) Query: 1 MTLTELKYIVAVAREKHFGHAAEACFVAQPTLSVAIKKLEDELGVVIFERGGTEVSVTPL 60 MTLTELKYIVAVAREKHFGHAAEAC VAQPTLSVAIKKLEDELGV +FERGG+E+S+TPL Sbjct: 1 MTLTELKYIVAVAREKHFGHAAEACHVAQPTLSVAIKKLEDELGVTLFERGGSEISMTPL 60 Query: 61 GAQIVAQAERVLEQTAAIKEIANQNKDPLSGPLRLGIIYTIGPYLLPSLVKTMIERVPQM 120 G QIVAQAERVLEQTAAIKEIA QNKDPL GP RLGIIYTI PYLLP LVK MIERVPQM Sbjct: 61 GVQIVAQAERVLEQTAAIKEIAKQNKDPLVGPFRLGIIYTIAPYLLPPLVKAMIERVPQM 120 Query: 121 PLILQENFTTRLIELLRQGELDAAIMALPFPEHGLNVMPLYDEEFMVALPRQHKWAERKE 180 PL+LQENFT +L+E LRQGE+DAAI+ALP P+ GL V P+YDE F+VA+P+ H WAER Sbjct: 121 PLVLQENFTVKLLEQLRQGEIDAAIVALPIPDQGLLVQPVYDEPFVVAVPKHHPWAERSS 180 Query: 181 IDARELKSETMLLLGNGHCFRDQVLEVCPEMSRFSTNGDGIARTFEGSSLETIRHMVSSG 240 + LKSETMLLLGNGHCFRDQVLEVCPEMSRFST+GDGIARTFEGSSLETIRHMV+SG Sbjct: 181 VTTDNLKSETMLLLGNGHCFRDQVLEVCPEMSRFSTSGDGIARTFEGSSLETIRHMVASG 240 Query: 241 IGVTVLPRASISDADNRDGMVRYVPFVAPAPSRRVVIAWRKSFTRQAAIDAVHQAVLACK 300 IG+TVLP+AS+ D DGM+RY+PFV P PSRRVV+ WRKSFTR AI+ V QA+L+C Sbjct: 241 IGITVLPQASVPDMHTTDGMLRYIPFVQPGPSRRVVLVWRKSFTRGVAIEEVRQALLSCD 300 Query: 301 LNGVQMLTNETVTTA 315 L GV ML +E ++ + Sbjct: 301 LPGVTMLPDEPLSES 315 >ref|ZP_08275315.1| Hydrogen peroxide-inducible genes activator [Oxalobacteraceae bacterium IMCC9480] gb|EGF31219.1| Hydrogen peroxide-inducible genes activator [Oxalobacteraceae bacterium IMCC9480] Length = 315 Score = 475 bits (1222), Expect = e-132, Method: Composition-based stats. Identities = 238/311 (76%), Positives = 270/311 (86%) Query: 1 MTLTELKYIVAVAREKHFGHAAEACFVAQPTLSVAIKKLEDELGVVIFERGGTEVSVTPL 60 MTLTELKYIVAV+R++HFGHAAE+CFVAQPTLSVAIKKLEDELGV+IFERGG+E+S+TPL Sbjct: 1 MTLTELKYIVAVSRQRHFGHAAESCFVAQPTLSVAIKKLEDELGVIIFERGGSEISMTPL 60 Query: 61 GAQIVAQAERVLEQTAAIKEIANQNKDPLSGPLRLGIIYTIGPYLLPSLVKTMIERVPQM 120 GA IVAQAE VLEQTAAIKEIA QNKDPL+GP RLGIIYTI PYLLP+LVKTMI VPQM Sbjct: 61 GALIVAQAEHVLEQTAAIKEIAKQNKDPLAGPFRLGIIYTIAPYLLPTLVKTMISTVPQM 120 Query: 121 PLILQENFTTRLIELLRQGELDAAIMALPFPEHGLNVMPLYDEEFMVALPRQHKWAERKE 180 PLILQE FT +L+E++RQGELDAAI+ALPF + GL+V LYDE F+VALP H WA R Sbjct: 121 PLILQEQFTVKLLEMVRQGELDAAIIALPFNDTGLSVQALYDEPFVVALPAHHPWASRDL 180 Query: 181 IDARELKSETMLLLGNGHCFRDQVLEVCPEMSRFSTNGDGIARTFEGSSLETIRHMVSSG 240 I + ELK+ETMLLLGNGHCFRDQVLEVCPEMSRF+T DGIARTFEGSSLETIRHMV+SG Sbjct: 181 ISSEELKTETMLLLGNGHCFRDQVLEVCPEMSRFATGNDGIARTFEGSSLETIRHMVASG 240 Query: 241 IGVTVLPRASISDADNRDGMVRYVPFVAPAPSRRVVIAWRKSFTRQAAIDAVHQAVLACK 300 IG+TVLP+AS+ D DG++RYVP P PSRRVVI WRKSFTR AAI+AV AVL C+ Sbjct: 241 IGITVLPQASVPDMQPVDGLLRYVPLAPPVPSRRVVIVWRKSFTRLAAIEAVRAAVLRCE 300 Query: 301 LNGVQMLTNET 311 L+GV ML + + Sbjct: 301 LHGVTMLPDAS 311