BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.4922.p (372 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|EFN54730.1| hypothetical protein CHLNCDRAFT_35982 [Chlorella ... 235 1e-59 ref|YP_003695504.1| amidase [Starkeya novella DSM 506] >gi|29693... 234 2e-59 ref|ZP_08405042.1| amidase [Hylemonella gracilis ATCC 19624] >gi... 234 2e-59 ref|YP_485702.1| amidase [Rhodopseudomonas palustris HaA2] >gi|8... 234 2e-59 ref|YP_003014592.1| amidase [Paenibacillus sp. JDR-2] >gi|247547... 230 4e-58 >gb|EFN54730.1| hypothetical protein CHLNCDRAFT_35982 [Chlorella variabilis] Length = 449 Score = 235 bits (599), Expect = 1e-59, Method: Composition-based stats. Identities = 154/357 (43%), Positives = 209/357 (58%), Gaps = 14/357 (3%) Query: 24 PGGLRSHPIPTRSNALVEQLLQAGATLVGKTLTDELAYSIHGDNHHYGTPVNSAAPERVP 83 P L +HP R+ A V+ LL AGAT++G + DE+AYS+ G+N HYGTP N AAP R+P Sbjct: 96 PAWLETHPPAQRNAAAVQALLDAGATIIGTNVMDEMAYSLAGENAHYGTPANPAAPGRIP 155 Query: 84 GGSSSGSAAAVAARLCDFALGTDTGGSTRVPASYCGVWGLRTSFGLLSTASMAPLCPSFD 143 GGSSSG+AAAVAA D LG DTGGS RVPA +CG+ G+R + G +S PL PSFD Sbjct: 156 GGSSSGTAAAVAAGDADLGLGGDTGGSVRVPACHCGILGIRPTHGRVSLQGAVPLAPSFD 215 Query: 144 TATWLAHDAGTFERVGQVLLPKTGS--TQLRKVLLPFDLLELAEAEFHPVVQRVYDALRS 201 T W A DAG VG VLL QLR++L+ D LAE + +YDAL Sbjct: 216 TGGWFARDAGVLRAVGGVLLDGGSRRPAQLRRLLVAADAFGLAE---EATTKALYDALSP 272 Query: 202 EL---------PGEHMRLSGDEGELERWRQAYIHASAFDAWQCHGAWISSARPVFGPAVQ 252 ++ P E S G + W A+ A + WQ HGAW++ RP FGP ++ Sbjct: 273 KIDQVAALLSKPQEVEVGSSTGGLSQAWFNAFRVHQAHEIWQQHGAWVTEHRPNFGPGIR 332 Query: 253 ARWDMAQNISADAARAAREKQDLVRHRVRSLLGADGVAVMPSASSVAPLRDATAAEIDQV 312 R+ MA+ +S A +++ R R+ LLG DGV ++P+A + APL + + ++D Sbjct: 333 ERFQMAEGVSRKQYEEAAQQRGAARQRLAELLGGDGVLMLPTAPAPAPLLNTPSDQLDAF 392 Query: 313 RARTFRLTCVAGLAGLPQVSMPFTTPAGLPIGVSLLGPAGSDLALIGLATRLWRSLQ 369 R LTC+AGL+G PQV++P GLP+G+ L+GP GSD L+ L +L L+ Sbjct: 393 RTSLISLTCIAGLSGFPQVNVPIADVEGLPVGLGLIGPPGSDEDLLELTEQLLAVLR 449 >ref|YP_003695504.1| amidase [Starkeya novella DSM 506] gb|ADH90885.1| Amidase [Starkeya novella DSM 506] Length = 401 Score = 234 bits (597), Expect = 2e-59, Method: Composition-based stats. Identities = 138/332 (41%), Positives = 194/332 (58%), Gaps = 7/332 (2%) Query: 42 QLLQAGATLVGKTLTDELAYSIHGDNHHYGTPVNSAAPERVPGGSSSGSAAAVAARLCDF 101 +LL GA L G+T++DEL YS+ G+N HYG PVN AA ER+PGGSSSGSA AVAA DF Sbjct: 74 RLLSTGAALRGRTISDELCYSLSGENFHYGMPVNPAARERLPGGSSSGSAVAVAAGQVDF 133 Query: 102 ALGTDTGGSTRVPASYCGVWGLRTSFGLLSTASMAPLCPSFDTATWLAHDAGTFERVGQV 161 A+GTD GGS RVPASYCG++GLR + G +S ++ P FDT W A DA +RVG+V Sbjct: 134 AIGTDCGGSVRVPASYCGLFGLRPTHGRVSLEGVSRFAPRFDTVGWFARDAALLKRVGEV 193 Query: 162 LLPKTGSTQLRKVLLPFDLLELAEAEFHPVVQRVYDALRSELPGEHMRLSGDEGELERWR 221 LL T +VL+ D E + + ++++ + L S P H+ G L+RW Sbjct: 194 LLGSTAPQGFDRVLVATDAFEQCDPQARALLEKAVERLGSPSP-LHLSPIG----LDRWL 248 Query: 222 QAYIHASAFDAWQCHGAWISSARPVFGPAVQARWDMAQNISADAARAAREKQDLVRHRVR 281 + A++ WQ G WI+ RP FG V R A+ + A AAR++ D + + Sbjct: 249 DTFRTLQAWEVWQSLGGWINQTRPSFGDGVGQRLAAAEQVGRADAEAARQRADAIALELD 308 Query: 282 SLLGADGVAVMPSASSVAPLRDATAAEIDQV-RARTFRLTCVAGLAGLPQVSMPFTTPAG 340 +G DG+ ++P+ PLR + EI+ R R +L C AGL GLPQ+++P T G Sbjct: 309 EAIG-DGLVLLPTTPGAPPLRATASTEIENAYRYRAMQLLCPAGLGGLPQLTIPVGTVDG 367 Query: 341 LPIGVSLLGPAGSDLALIGLATRLWRSLQAAP 372 P+G+S++ G D+ L+ LA + + L AP Sbjct: 368 APVGLSIMARRGKDMDLMDLAAKAFADLPTAP 399 >ref|ZP_08405042.1| amidase [Hylemonella gracilis ATCC 19624] gb|EGI77663.1| amidase [Hylemonella gracilis ATCC 19624] Length = 273 Score = 234 bits (596), Expect = 2e-59, Method: Composition-based stats. Identities = 156/275 (56%), Positives = 199/275 (72%), Gaps = 8/275 (2%) Query: 98 LCDFALGTDTGGSTRVPASYCGVWGLRTSFGLLSTASMAPLCPSFDTATWLAHDAGTFER 157 L DFALGTDTGGSTRVPASYCG+WGLR++ GL+STA + PL PSFDTATWLA + FER Sbjct: 2 LVDFALGTDTGGSTRVPASYCGLWGLRSTHGLVSTAGLVPLHPSFDTATWLAAKSDVFER 61 Query: 158 VGQVLLPKTGSTQLRKVLLPFDLLELAEAEFHPVVQRVYDALRSELP--GEHMRLSGDEG 215 VG+VLLP++G + R++LLP D ELA+ F + R +AL L E++R++G+ G Sbjct: 62 VGRVLLPESG-YRPRRLLLPLDAWELADDLFTTPLHRAREALAQLLACVPENLRIAGEAG 120 Query: 216 ELERWRQAYIHASAFDAWQCHGAWISSARPVFGPAVQARWDMAQNISADAARAAREKQDL 275 L WRQ Y+ A AF+ WQ HGAWI+ A+P F PA+ RW A +SA+AA AAR Q Sbjct: 121 -LPAWRQTYVTAGAFEGWQVHGAWITEAKPTFAPAIAGRWRAASQVSAEAAEAARAMQAQ 179 Query: 276 VRHRVRSLLGADGVAVMPSASSVAPLRDATAAEIDQVRARTFRLTCVAGLAGLPQVSMPF 335 VR +VR+LLG DG+ ++PSA+S+ PLRDA A +D VR RT +TC+AGL GLPQ+S+P Sbjct: 180 VRAQVRALLGDDGLLLLPSAASLPPLRDADPAAVDTVRLRTMAITCIAGLCGLPQISLPV 239 Query: 336 TTPAGLPIGVSLLGPAGSDLALIGLATRLWRSLQA 370 T +G +G+SLLGPAGSDLALI R+ RSL A Sbjct: 240 RTASGDMLGLSLLGPAGSDLALI----RIARSLHA 270 >ref|YP_485702.1| amidase [Rhodopseudomonas palustris HaA2] gb|ABD06791.1| Amidase [Rhodopseudomonas palustris HaA2] Length = 399 Score = 234 bits (596), Expect = 2e-59, Method: Composition-based stats. Identities = 145/328 (44%), Positives = 208/328 (63%), Gaps = 4/328 (1%) Query: 24 PGGLRSHPIPTRSNALVEQLLQAGATLVGKTLTDELAYSIHGDNHHYGTPVNSAAPERVP 83 P L +HP+PT+S+ +V++L AG T+VGKT TDE+A+S++G+N HYGTP+N AAP R+P Sbjct: 51 PEWLATHPVPTQSSPVVDRLFAAGGTMVGKTHTDEMAWSLNGENAHYGTPINPAAPGRIP 110 Query: 84 GGSSSGSAAAVAARLCDFALGTDTGGSTRVPASYCGVWGLRTSFGLLSTASMAPLCPSFD 143 GGSSSGSAAA A L DFA+G+DTGGS R+PASYCGV+G+RT+ G + PL PS+D Sbjct: 111 GGSSSGSAAATAGGLVDFAIGSDTGGSVRLPASYCGVYGIRTTHGRIPLDGAVPLAPSYD 170 Query: 144 TATWLAHDAGTFERVGQVLLPKTGSTQL-RKVLLPFDLLELAEAEFHPVVQRVYDALRSE 202 T W + A RVG+VLL + + ++VL+ DL E V+Q L + Sbjct: 171 TVGWFSRSAALMARVGEVLLDGVRAPRRPKRVLIARDLFAALEPRVVEVLQPGLAQLAAM 230 Query: 203 L-PGEHMRLSGDEGELERWRQAYIHASAFDAWQCHGAWISSARPVFGPAVQARWDMAQNI 261 L E + ++GD + WR A+ + +AW HGAW+++ +P FGP V+ R+ A + Sbjct: 231 LGEPEPVEVAGD--QRPAWRNAFRVLQSAEAWAAHGAWVNAVKPAFGPGVKERFAAAAVL 288 Query: 262 SADAARAAREKQDLVRHRVRSLLGADGVAVMPSASSVAPLRDATAAEIDQVRARTFRLTC 321 AA+ +D + +R+LL D V + P+A +APLR++T ++ RAR+ L C Sbjct: 289 DPAEVVAAKALRDTITATMRTLLQDDAVLIAPTAPGIAPLRNSTGEALETFRARSLELLC 348 Query: 322 VAGLAGLPQVSMPFTTPAGLPIGVSLLG 349 AG AGLPQ+S+P T PIG+SL+G Sbjct: 349 PAGHAGLPQLSLPLATLDDCPIGLSLIG 376 >ref|YP_003014592.1| amidase [Paenibacillus sp. JDR-2] gb|ACT04506.1| Amidase [Paenibacillus sp. JDR-2] Length = 395 Score = 230 bits (586), Expect = 4e-58, Method: Composition-based stats. Identities = 142/341 (41%), Positives = 199/341 (58%), Gaps = 7/341 (2%) Query: 24 PGGLRSHPIPTRSNALVEQLLQAGATLVGKTLTDELAYSIHGDNHHYGTPVNSAAPERVP 83 P LR+H ++ + + +LL +GA L G T TDEL YSI+G N HYGTPVN AP+R+P Sbjct: 46 PDWLRTHSPWEKTASSISKLLASGARLTGTTHTDELMYSINGQNDHYGTPVNPKAPDRIP 105 Query: 84 GGSSSGSAAAVAARLCDFALGTDTGGSTRVPASYCGVWGLRTSFGLLSTASMAPLCPSFD 143 GGSSSGSA AVAA DFALGTDTGGS RVPA+YCG++G R + +S + PL PS+D Sbjct: 106 GGSSSGSAVAVAAGAVDFALGTDTGGSVRVPAAYCGIYGFRPTHDFVSIDGVIPLAPSYD 165 Query: 144 TATWLAHDAGTFERVGQVLLPKTGSTQ-----LRKVLLPFDLLELAEAEFHPVVQRV-YD 197 T W+A D +VG VLLP T + R+++ + E AE + V Sbjct: 166 TVGWMARDISLLRQVGDVLLPGTTDAETPRQDFRRLIFAEEAWEKAEPSCRKALGSVCIQ 225 Query: 198 ALRSELPGEHMRLSGDEGELERWRQAYIHASAFDAWQCHGAWISSARPVFGPAVQARWDM 257 +++E + R EG LE W A+ + WQ HG WI +PVFG ++ AR+ Sbjct: 226 LVQTEGMTQEWRSVAPEG-LEAWSHAFRTTQGREIWQTHGEWIVREKPVFGESIGARFAS 284 Query: 258 AQNISADAARAAREKQDLVRHRVRSLLGADGVAVMPSASSVAPLRDATAAEIDQVRARTF 317 A IS A ++++R R+R LLG DG+ ++P+ AP R +++ R RT Sbjct: 285 ASTISGAEAERDGALREIIRKRLRELLGDDGLLIIPTIPGTAPSRTIHGPAVEERRFRTM 344 Query: 318 RLTCVAGLAGLPQVSMPFTTPAGLPIGVSLLGPAGSDLALI 358 +L+C+AGL+GLPQV++P G PI +S++ DL L+ Sbjct: 345 QLSCIAGLSGLPQVTIPAGEVDGAPIALSVIAGVKQDLKLL 385