BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.4921.p (338 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_998290.1| hypothetical protein Veis_3554 [Verminephrobact... 468 e-130 ref|YP_002942358.1| polysaccharide deacetylase [Variovorax parad... 439 e-121 ref|ZP_06684918.1| polysaccharide deacetylase [Achromobacter pie... 431 e-119 ref|YP_004152785.1| polysaccharide deacetylase [Variovorax parad... 429 e-118 ref|ZP_08407421.1| polysaccharide deacetylase [Hylemonella graci... 428 e-118 >ref|YP_998290.1| hypothetical protein Veis_3554 [Verminephrobacter eiseniae EF01-2] gb|ABM59272.1| conserved hypothetical protein [Verminephrobacter eiseniae EF01-2] Length = 313 Score = 468 bits (1204), Expect = e-130, Method: Composition-based stats. Identities = 222/292 (76%), Positives = 246/292 (84%), Gaps = 4/292 (1%) Query: 7 PPNAGEALGHDDGRDAYGVLRSHGRFGYSPIHRRPDYCWPNGARLAVYLGFNIEHFAFGE 66 P NA ++ R A+ L HGRFGY I +RP Y WP+GA LAVYLGFNIEHFAFG+ Sbjct: 5 PQNAAPSIH----RTAFDALPVHGRFGYCAIIQRPHYRWPHGAGLAVYLGFNIEHFAFGQ 60 Query: 67 GLGAKLGPVCPEPDVLNYAWREYGNRVGAWRCLELFEQLGLPAGVLINTALYDHCPELVE 126 GLGA+LGPVCPEPDVLNYAWREYGNRVGAWRCLELF+ LGLP GVL NTALYDHCPEL+ Sbjct: 61 GLGARLGPVCPEPDVLNYAWREYGNRVGAWRCLELFDSLGLPVGVLANTALYDHCPELIA 120 Query: 127 AFAARGDELIGHGHTNAHQQGTLDEEAEAALLRHCRTRIQAESGVQPTGWLSPWISESLV 186 AF ARGDELIGHGH+NAHQQGTLDE AE ALL+HCR+R+Q SG PTGWLSPWISES Sbjct: 121 AFVARGDELIGHGHSNAHQQGTLDEAAERALLQHCRSRMQTHSGQAPTGWLSPWISESFA 180 Query: 187 TPDLLQETGYRYNLNWAHDDQPVRMRTRTGETLWSIPYPQELNDIPMIVARQMDGRDFAR 246 TPDLL E+GYRY LNW HDDQP RM+TR G+ LWSIPYPQE+NDIPMIVARQMDG+DFA+ Sbjct: 181 TPDLLLESGYRYTLNWCHDDQPTRMKTRNGQALWSIPYPQEVNDIPMIVARQMDGKDFAQ 240 Query: 247 MIVDNFDEMREQALRQPLVMGIALHPYLVGQPYRLRHLRTALQHLAAAGGAG 298 +I+DNFDEM EQ+ +QPLVMGIALHPYLVGQPYRLRHLR ALQH+A G Sbjct: 241 LIIDNFDEMLEQSRKQPLVMGIALHPYLVGQPYRLRHLRRALQHIAQGRDKG 292 >ref|YP_002942358.1| polysaccharide deacetylase [Variovorax paradoxus S110] gb|ACS17092.1| polysaccharide deacetylase [Variovorax paradoxus S110] Length = 307 Score = 439 bits (1129), Expect = e-121, Method: Composition-based stats. Identities = 211/275 (76%), Positives = 231/275 (84%) Query: 24 GVLRSHGRFGYSPIHRRPDYCWPNGARLAVYLGFNIEHFAFGEGLGAKLGPVCPEPDVLN 83 G L +HGRFGYSPI RRPDY WPNGARLAVY+GFNIEHFAFG+GLGA +GP P+PDVLN Sbjct: 7 GRLPTHGRFGYSPITRRPDYAWPNGARLAVYIGFNIEHFAFGDGLGACIGPASPQPDVLN 66 Query: 84 YAWREYGNRVGAWRCLELFEQLGLPAGVLINTALYDHCPELVEAFAARGDELIGHGHTNA 143 + WREYGNRVGAWRCLELF+ L LPAG L+NTALYDHCPELV+A ARGDELIGHGH+NA Sbjct: 67 HGWREYGNRVGAWRCLELFDALALPAGALVNTALYDHCPELVQACVARGDELIGHGHSNA 126 Query: 144 HQQGTLDEEAEAALLRHCRTRIQAESGVQPTGWLSPWISESLVTPDLLQETGYRYNLNWA 203 +QG DE E ALL CR R+Q ESG P GWLSPWISES VTPDLL ETGY Y LNW Sbjct: 127 ERQGAWDEAHERALLSGCRERMQRESGQAPAGWLSPWISESAVTPDLLAETGYGYTLNWC 186 Query: 204 HDDQPVRMRTRTGETLWSIPYPQELNDIPMIVARQMDGRDFARMIVDNFDEMREQALRQP 263 HDDQPVRMRTR G ++WS+PYPQELNDIPMIV R MD RDF+ M+VDNFDEMREQ+ QP Sbjct: 187 HDDQPVRMRTRGGSSIWSVPYPQELNDIPMIVGRLMDARDFSAMVVDNFDEMREQSRAQP 246 Query: 264 LVMGIALHPYLVGQPYRLRHLRTALQHLAAAGGAG 298 LVMG+ALHPY+VGQPYRLRHLRTAL HLA A G Sbjct: 247 LVMGLALHPYIVGQPYRLRHLRTALAHLARARDRG 281 >ref|ZP_06684918.1| polysaccharide deacetylase [Achromobacter piechaudii ATCC 43553] gb|EFF78269.1| polysaccharide deacetylase [Achromobacter piechaudii ATCC 43553] Length = 320 Score = 431 bits (1109), Expect = e-119, Method: Composition-based stats. Identities = 212/286 (74%), Positives = 235/286 (82%), Gaps = 1/286 (0%) Query: 26 LRSHGRFGYSPIHRRPDYCWPNGARLAVYLGFNIEHFAFGEGLGAKLGPVCPEPDVLNYA 85 L HGRF Y I RPDY WPNGARLAVYLGFNIEHFAFGEGLGA+LGP P PDVLNYA Sbjct: 24 LACHGRFAYQAIAGRPDYVWPNGARLAVYLGFNIEHFAFGEGLGAELGPASPHPDVLNYA 83 Query: 86 WREYGNRVGAWRCLELFEQLGLPAGVLINTALYDHCPELVEAFAARGDELIGHGHTNAHQ 145 WREYGNRVGAWRCLELF+QL LPAGVLINTALYDHCPEL++AF ARGDELIGHG +NAH+ Sbjct: 84 WREYGNRVGAWRCLELFDQLRLPAGVLINTALYDHCPELIDAFHARGDELIGHGFSNAHR 143 Query: 146 QGTLDEEAEAALLRHCRTRIQAESGVQPTGWLSPWISESLVTPDLLQETGYRYNLNWAHD 205 QG L E+ E+ALL HCR RI+ +G P GWLSPWISES TPDLL E+GYRY LNW HD Sbjct: 144 QGGLSEDDESALLAHCRDRIERHAGKAPAGWLSPWISESRATPDLLAESGYRYTLNWCHD 203 Query: 206 DQPVRMRTRTGETLWSIPYPQELNDIPMIVARQMDGRDFARMIVDNFDEMREQALRQPLV 265 DQP+RMRTR G+ LW+IPYPQELNDIPMI+ R+MD RDFA MI+D F+EMR Q+ RQPLV Sbjct: 204 DQPMRMRTRAGD-LWAIPYPQELNDIPMIMGRKMDARDFADMILDQFEEMRAQSARQPLV 262 Query: 266 MGIALHPYLVGQPYRLRHLRTALQHLAAAGGAGRRGARSRRDLVHH 311 MGIALHPY+VGQPYRLRHLR AL+ LAAA G + D+ H Sbjct: 263 MGIALHPYIVGQPYRLRHLRRALEPLAAARDRGEIWFTTPGDIYRH 308 >ref|YP_004152785.1| polysaccharide deacetylase [Variovorax paradoxus EPS] gb|ADU34674.1| polysaccharide deacetylase [Variovorax paradoxus EPS] Length = 307 Score = 429 bits (1102), Expect = e-118, Method: Composition-based stats. Identities = 208/274 (75%), Positives = 226/274 (82%) Query: 25 VLRSHGRFGYSPIHRRPDYCWPNGARLAVYLGFNIEHFAFGEGLGAKLGPVCPEPDVLNY 84 +L SH RF Y PI RRPDY WPNGARLAVYLGFNIEHFAFG+GLGA +GP P+PDVLN+ Sbjct: 8 LLPSHDRFDYRPITRRPDYVWPNGARLAVYLGFNIEHFAFGDGLGACIGPASPQPDVLNH 67 Query: 85 AWREYGNRVGAWRCLELFEQLGLPAGVLINTALYDHCPELVEAFAARGDELIGHGHTNAH 144 WREYGNRVGAWRCLELF+ L LP G LINTALYDHCPELV A ARGDELIGHGH+NA Sbjct: 68 GWREYGNRVGAWRCLELFDALALPTGALINTALYDHCPELVAACVARGDELIGHGHSNAE 127 Query: 145 QQGTLDEEAEAALLRHCRTRIQAESGVQPTGWLSPWISESLVTPDLLQETGYRYNLNWAH 204 +QG LDEE E ALL CR R+ ESG P GWLSPWISES VTPDLL ETGY Y LNW H Sbjct: 128 RQGALDEEHERALLLRCRERMLRESGQAPAGWLSPWISESAVTPDLLGETGYGYTLNWCH 187 Query: 205 DDQPVRMRTRTGETLWSIPYPQELNDIPMIVARQMDGRDFARMIVDNFDEMREQALRQPL 264 DDQPVRMRTR G ++WS+PYPQELNDIPMIV R MD +DF+ M+VDNFDEM EQ+ QPL Sbjct: 188 DDQPVRMRTRGGGSIWSVPYPQELNDIPMIVGRLMDAKDFSAMVVDNFDEMLEQSRAQPL 247 Query: 265 VMGIALHPYLVGQPYRLRHLRTALQHLAAAGGAG 298 VMG+ALHPY+VGQPYRLRHLRTAL HLA A G Sbjct: 248 VMGLALHPYIVGQPYRLRHLRTALAHLARARDRG 281 >ref|ZP_08407421.1| polysaccharide deacetylase [Hylemonella gracilis ATCC 19624] gb|EGI75450.1| polysaccharide deacetylase [Hylemonella gracilis ATCC 19624] Length = 311 Score = 428 bits (1100), Expect = e-118, Method: Composition-based stats. Identities = 206/268 (76%), Positives = 224/268 (83%) Query: 24 GVLRSHGRFGYSPIHRRPDYCWPNGARLAVYLGFNIEHFAFGEGLGAKLGPVCPEPDVLN 83 G L HGRF Y I RR DY WP GARLAVYL NIEHFAFGEGLGA +GP P+PDVLN Sbjct: 7 GQLPDHGRFPYQAITRRADYHWPGGARLAVYLALNIEHFAFGEGLGAMIGPASPQPDVLN 66 Query: 84 YAWREYGNRVGAWRCLELFEQLGLPAGVLINTALYDHCPELVEAFAARGDELIGHGHTNA 143 Y+WREYGNRVG WRCLELF++L LPA LINTALYDHCPE+V A AARGDEL+GHGH+NA Sbjct: 67 YSWREYGNRVGVWRCLELFDELKLPAAALINTALYDHCPEVVVACAARGDELVGHGHSNA 126 Query: 144 HQQGTLDEEAEAALLRHCRTRIQAESGVQPTGWLSPWISESLVTPDLLQETGYRYNLNWA 203 +QG LDE+AE LL CR R++A SG P GWLSPWISES +TPDLL E GYRY LNW Sbjct: 127 ERQGVLDEQAERELLALCRDRMRARSGAAPAGWLSPWISESKLTPDLLAEAGYRYTLNWC 186 Query: 204 HDDQPVRMRTRTGETLWSIPYPQELNDIPMIVARQMDGRDFARMIVDNFDEMREQALRQP 263 HDDQPVRM TR G+ LWSIPYPQELNDIPMIV RQMDG+DFA+MIVDNFDEM EQ+ +QP Sbjct: 187 HDDQPVRMTTRGGQGLWSIPYPQELNDIPMIVGRQMDGKDFAQMIVDNFDEMLEQSRQQP 246 Query: 264 LVMGIALHPYLVGQPYRLRHLRTALQHL 291 LVMGIALHPYLVGQPYRLRHLR ALQHL Sbjct: 247 LVMGIALHPYLVGQPYRLRHLRRALQHL 274