BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.4916.p         (158 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001355158.1| hypothetical protein mma_3468 [Janthinobacte...   176   9e-43
ref|YP_001101459.1| hypothetical protein HEAR3231 [Herminiimonas...   174   3e-42
gb|EFV85209.1| hypothetical protein HMPREF0005_03847 [Achromobac...   166   1e-39
gb|EGP48224.1| hypothetical protein AXXA_01723 [Achromobacter xy...   163   7e-39
ref|ZP_06688967.1| hypothetical protein HMPREF0004_4543 [Achromo...   160   6e-38

>ref|YP_001355158.1| hypothetical protein mma_3468 [Janthinobacterium sp. Marseille]
 gb|ABR90760.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille]
          Length = 127

 Score =  176 bits (447), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 92/125 (73%), Positives = 100/125 (80%)

Query: 28  YAINLPDVVAEVRHAFERYEVALTTNQVEVLDELFLDGPHTVRYGATENLVGTEAIRAFR 87
           Y INLPDVVAEV  AF+RYE ALT N V VLDELF + P T+RYGA ENLVG EAI+AFR
Sbjct: 3   YEINLPDVVAEVTAAFQRYEAALTGNDVAVLDELFWNNPRTLRYGAGENLVGYEAIKAFR 62

Query: 88  QGRSPKNLMRSLRATVITTYGRDYAVADTEFTREGETRIGRQSHTWLRCPQGWRIVAAHV 147
             R  K L R L  TVITTYGRDYA A+TEFTR+GETRIGRQSHTWLR P+GWRIVAAHV
Sbjct: 63  LARPSKGLERDLVNTVITTYGRDYATANTEFTRQGETRIGRQSHTWLRLPEGWRIVAAHV 122

Query: 148 SWMDA 152
           S + A
Sbjct: 123 SLIAA 127


>ref|YP_001101459.1| hypothetical protein HEAR3231 [Herminiimonas arsenicoxydans]
 emb|CAL63338.1| Conserved hypothetical protein [Herminiimonas arsenicoxydans]
          Length = 127

 Score =  174 bits (442), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 92/125 (73%), Positives = 100/125 (80%)

Query: 28  YAINLPDVVAEVRHAFERYEVALTTNQVEVLDELFLDGPHTVRYGATENLVGTEAIRAFR 87
           + INLP+VVAEV  AF RYE ALT N V VLDELF + P+T+RYGA ENL+G EAIRAFR
Sbjct: 3   HEINLPEVVAEVTAAFMRYEAALTGNDVAVLDELFWNNPNTLRYGAGENLLGYEAIRAFR 62

Query: 88  QGRSPKNLMRSLRATVITTYGRDYAVADTEFTREGETRIGRQSHTWLRCPQGWRIVAAHV 147
             R  K L R L  TVITTYGRDYA A+TEFTR+GETRIGRQSHTWLR PQGWRIVAAHV
Sbjct: 63  LERPSKGLERDLMHTVITTYGRDYATANTEFTRKGETRIGRQSHTWLRLPQGWRIVAAHV 122

Query: 148 SWMDA 152
           S M A
Sbjct: 123 SLMSA 127


>gb|EFV85209.1| hypothetical protein HMPREF0005_03847 [Achromobacter xylosoxidans
           C54]
          Length = 125

 Score =  166 bits (419), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 83/121 (68%), Positives = 94/121 (77%)

Query: 30  INLPDVVAEVRHAFERYEVALTTNQVEVLDELFLDGPHTVRYGATENLVGTEAIRAFRQG 89
           INLPDVVAEV  AF RYE AL  NQVEVLDELF + PHT+RYGA ENL G +AIRAFR G
Sbjct: 3   INLPDVVAEVTVAFARYEAALVGNQVEVLDELFWNSPHTLRYGAAENLYGYDAIRAFRAG 62

Query: 90  RSPKNLMRSLRATVITTYGRDYAVADTEFTREGETRIGRQSHTWLRCPQGWRIVAAHVSW 149
           RSP+ L R +  T ITTYGRD+A  + EF R+G  RIGRQS TW+R PQGWR+V+AHVS 
Sbjct: 63  RSPQGLARRVLRTAITTYGRDFATTNIEFQRDGSDRIGRQSQTWMRTPQGWRVVSAHVSL 122

Query: 150 M 150
           M
Sbjct: 123 M 123


>gb|EGP48224.1| hypothetical protein AXXA_01723 [Achromobacter xylosoxidans AXX-A]
          Length = 125

 Score =  163 bits (413), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 81/121 (66%), Positives = 93/121 (76%)

Query: 30  INLPDVVAEVRHAFERYEVALTTNQVEVLDELFLDGPHTVRYGATENLVGTEAIRAFRQG 89
           INLPDVVAEV  AF RYE AL  NQVEVLDELF + PHT+RYGA ENL G +AIRAFR G
Sbjct: 3   INLPDVVAEVTVAFARYEAALVANQVEVLDELFWNSPHTLRYGAGENLYGYDAIRAFRAG 62

Query: 90  RSPKNLMRSLRATVITTYGRDYAVADTEFTREGETRIGRQSHTWLRCPQGWRIVAAHVSW 149
           RSP+ L R +  T ITTYG D+A  + EF R+G  R+GRQS TW+R PQGWR+V+AHVS 
Sbjct: 63  RSPQGLARQVLRTAITTYGHDFATTNIEFQRDGSDRVGRQSQTWMRTPQGWRVVSAHVSL 122

Query: 150 M 150
           M
Sbjct: 123 M 123


>ref|ZP_06688967.1| hypothetical protein HMPREF0004_4543 [Achromobacter piechaudii ATCC
           43553]
 gb|EFF74121.1| hypothetical protein HMPREF0004_4543 [Achromobacter piechaudii ATCC
           43553]
          Length = 124

 Score =  160 bits (405), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 78/121 (64%), Positives = 91/121 (75%)

Query: 30  INLPDVVAEVRHAFERYEVALTTNQVEVLDELFLDGPHTVRYGATENLVGTEAIRAFRQG 89
           INLPD+VAEV  AFERYE+AL +N VE LD LF + PHT+RYGA ENL G +AIR FR G
Sbjct: 3   INLPDIVAEVTAAFERYEIALVSNDVEALDSLFWNSPHTLRYGAGENLYGYDAIREFRAG 62

Query: 90  RSPKNLMRSLRATVITTYGRDYAVADTEFTREGETRIGRQSHTWLRCPQGWRIVAAHVSW 149
           RSP+ L R +  T ITTYG D+A  + EF REG  RIGRQS TW+R P GWR+V+AHVS 
Sbjct: 63  RSPQGLARQVLRTAITTYGTDFATTNIEFKREGSDRIGRQSQTWMRTPAGWRVVSAHVSL 122

Query: 150 M 150
           M
Sbjct: 123 M 123