BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.4906.p (287 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_002005014.1| hypothetical protein RALTA_A0981 [Cupriavidu... 188 1e-45 ref|YP_003977245.1| hypothetical protein AXYL_01189 [Achromobact... 185 7e-45 gb|EFV82791.1| exported protein [Achromobacter xylosoxidans C54] 181 9e-44 gb|EGP45450.1| hypothetical protein AXXA_16142 [Achromobacter xy... 179 5e-43 ref|YP_787204.1| hypothetical protein BAV2706 [Bordetella avium ... 176 3e-42 >ref|YP_002005014.1| hypothetical protein RALTA_A0981 [Cupriavidus taiwanensis LMG 19424] emb|CAQ68947.1| conserved hypothetical protein; putative exported PROTEIN [Cupriavidus taiwanensis LMG 19424] Length = 265 Score = 188 bits (477), Expect = 1e-45, Method: Composition-based stats. Identities = 117/267 (43%), Positives = 167/267 (62%), Gaps = 9/267 (3%) Query: 25 LRNAQLAGLASLAAAGALLAIAVIAPAQAQEAAPAAPDANASPLHLAGNIGIVSQYVFRG 84 LR++ +A LA +A+ L+ A+ A AQ+Q AP+ PDA ASP N+ + + Y +RG Sbjct: 4 LRHSAVALLAC-SASFVLIFAAMPAMAQSQPDAPSRPDAEASPHTFTANVSVATDYRYRG 62 Query: 85 TTQTNQKPALQGGFDLTHDNGLYAGVWMSNISWISDTNPAASASLEADLYGGWKPAL-TD 143 QTN++PA+QGGFD +H +G Y G W S+ISW+ D+NP SA +E D YGG++ L D Sbjct: 63 LMQTNRRPAIQGGFDYSHSSGFYLGNWNSSISWLGDSNPGVSAPIEMDFYGGYRHTLGGD 122 Query: 144 WLTGDIGVLHYAYPGSYPAGMTKPDTTEVYLGVDAKWIAFKYSYSTGNTFGNADTRGSTY 203 W+ D+GVL Y YPG YPA T+P TTE+Y + + FKYSY+ N FG D++ S Y Sbjct: 123 WIY-DVGVLQYYYPGDYPANYTRPYTTELYAALGYGPVTFKYSYAPTNLFGFPDSKHSWY 181 Query: 204 ADLSVTHELFA-GITGLAHIGRQRYTGSNASNLSYTDWKLGLTRDFSGYV-LGLAWTGSN 261 ADL+ L G+T AH+G Q+ ++A SY DWK+GLT+D + L +A+ +N Sbjct: 182 ADLTANVPLNVWGLTLNAHVGYQKVQVADA---SYVDWKIGLTKDLGKRLALAVAYIDAN 238 Query: 262 APDAGYT-LRGKNIGSNQWIASVNKSF 287 A A YT +G+ +G AS+ K+F Sbjct: 239 ADKAVYTNAKGRYMGRGTAWASLTKTF 265 >ref|YP_003977245.1| hypothetical protein AXYL_01189 [Achromobacter xylosoxidans A8] gb|ADP14530.1| hypothetical protein AXYL_01189 [Achromobacter xylosoxidans A8] Length = 258 Score = 185 bits (469), Expect = 7e-45, Method: Composition-based stats. Identities = 108/233 (46%), Positives = 145/233 (62%), Gaps = 5/233 (2%) Query: 58 PAAPDANASPLHLAGNIGIVSQYVFRGTTQTNQKPALQGGFDLTHDNGLYAGVWMSNISW 117 P P +AS L N+ + SQY +RG Q+N KPA+QGGFDL H +G Y G W S+ISW Sbjct: 28 PTDPAPSASDFTLTANLTLASQYRYRGLMQSNNKPAIQGGFDLVHSSGFYLGNWNSSISW 87 Query: 118 ISDTNPAASASLEADLYGGWKPALTDWLTGDIGVLHYAYPGSYPAGMTKPDTTEVYLGVD 177 ++D+N SA +E D YGG+K L + D+GVL Y YPG YP+G T PDTTE+Y G+ Sbjct: 88 LNDSNSEVSAPVEMDFYGGYKGNLAQDVPVDLGVLQYYYPGDYPSGYTSPDTTELYAGIG 147 Query: 178 AKWIAFKYSYSTGNTFGNADTRGSTYADLSVTHELFA-GITGLAHIGRQRYTGSNASNLS 236 + FKYS + N FG AD++ S Y DLS + G+T AH+GRQ N + + Sbjct: 148 YGPLMFKYSIAMTNLFGFADSKHSQYFDLSGNFDTGVWGLTLNAHLGRQLV--RNVDHAN 205 Query: 237 YTDWKLGLTRDF-SGYVLGLAWTGSNAPDAGYT-LRGKNIGSNQWIASVNKSF 287 YTDWKLGLT+DF G + LA+ +NA A YT RG+++G + S+ K+F Sbjct: 206 YTDWKLGLTKDFGQGLSVSLAYLDTNADRAVYTNTRGRDMGRATGLLSLTKTF 258 >gb|EFV82791.1| exported protein [Achromobacter xylosoxidans C54] Length = 251 Score = 181 bits (460), Expect = 9e-44, Method: Composition-based stats. Identities = 109/228 (47%), Positives = 145/228 (63%), Gaps = 5/228 (2%) Query: 63 ANASPLHLAGNIGIVSQYVFRGTTQTNQKPALQGGFDLTHDNGLYAGVWMSNISWISDTN 122 A+A L N+ + SQY +RG QTN KPA+QGGFD TH +GLY G W S++SW++D N Sbjct: 26 ADAPEYTLTANVTLASQYRYRGLMQTNNKPAIQGGFDFTHASGLYLGNWNSSVSWLNDGN 85 Query: 123 PAASASLEADLYGGWKPALTDWLTGDIGVLHYAYPGSYPAGMTKPDTTEVYLGVDAKWIA 182 SA +E D YGG+K L + D+GVL Y YPG YP+G T PDTTE+Y GV + Sbjct: 86 SDVSAPVEMDFYGGYKGNLAPDVPFDLGVLQYYYPGDYPSGYTSPDTTELYAGVGYGPVM 145 Query: 183 FKYSYSTGNTFGNADTRGSTYADLSVTHEL-FAGITGLAHIGRQRYTGSNASNLSYTDWK 241 FKYS + N FG AD++ S Y DLS + F G+T AH+GRQ T N ++ +YTDWK Sbjct: 146 FKYSVAMTNLFGFADSKYSQYFDLSGNFDTGFWGLTVNAHVGRQ--TVRNLTDGAYTDWK 203 Query: 242 LGLTRDF-SGYVLGLAWTGSNAPDAGYT-LRGKNIGSNQWIASVNKSF 287 LGLT+DF G + +A+ +NA A YT RG+ +G + S+ K+F Sbjct: 204 LGLTKDFGQGLAISVAYIDTNADRAVYTNSRGRYMGRATGLLSLTKTF 251 >gb|EGP45450.1| hypothetical protein AXXA_16142 [Achromobacter xylosoxidans AXX-A] Length = 253 Score = 179 bits (454), Expect = 5e-43, Method: Composition-based stats. Identities = 107/226 (47%), Positives = 143/226 (63%), Gaps = 5/226 (2%) Query: 65 ASPLHLAGNIGIVSQYVFRGTTQTNQKPALQGGFDLTHDNGLYAGVWMSNISWISDTNPA 124 A L N+ + SQY +RG QTN +PA+QGGFD TH +GLY G W S+ISW++D N Sbjct: 30 APEYSLTANVTLASQYRYRGLMQTNNQPAIQGGFDFTHASGLYLGNWNSSISWLNDGNSK 89 Query: 125 ASASLEADLYGGWKPALTDWLTGDIGVLHYAYPGSYPAGMTKPDTTEVYLGVDAKWIAFK 184 SA +E D YGG+K L + D+GVL Y YPG YP+G T PDTTE+Y G+ + FK Sbjct: 90 VSAPVEMDFYGGYKGNLAPNVPFDLGVLQYYYPGDYPSGYTSPDTTELYAGLGYGPVLFK 149 Query: 185 YSYSTGNTFGNADTRGSTYADLSVTHEL-FAGITGLAHIGRQRYTGSNASNLSYTDWKLG 243 YS + N FG AD++ S Y DLS + F G+T AH+GRQ T N ++ +YTDWKLG Sbjct: 150 YSIAMTNLFGFADSKYSQYFDLSGNFDTGFWGLTVNAHVGRQ--TVRNVTDGAYTDWKLG 207 Query: 244 LTRDF-SGYVLGLAWTGSNAPDAGYT-LRGKNIGSNQWIASVNKSF 287 LT+DF G + +A+ +NA A YT RG+ +G + S+ K+F Sbjct: 208 LTKDFGQGLAVSIAYIDTNADRAVYTNSRGRYMGRATGLLSLTKTF 253 >ref|YP_787204.1| hypothetical protein BAV2706 [Bordetella avium 197N] emb|CAJ50317.1| putative exported protein [Bordetella avium 197N] Length = 247 Score = 176 bits (447), Expect = 3e-42, Method: Composition-based stats. Identities = 111/234 (47%), Positives = 147/234 (62%), Gaps = 9/234 (3%) Query: 57 APAAPDANASPLHLAGNIGIVSQYVFRGTTQTNQKPALQGGFDLTHDNGLYAGVWMSNIS 116 +PAAP+ ++ L+ NIG+ SQY +RG QTN +PA+ GG D NGLY G W S+IS Sbjct: 20 SPAAPEQDS----LSVNIGLASQYRYRGLMQTNNRPAVSGGVDYQLANGLYIGNWNSSIS 75 Query: 117 WISDTNPAASASLEADLYGGWKPALTDWLTGDIGVLHYAYPGSYPAGMTKPDTTEVYLGV 176 W++D+NP SA +E D YGG+K LT + DIGV+ Y YPG YP+G T+P+TTE+Y G+ Sbjct: 76 WLNDSNPQVSAPIEMDFYGGYKGELTTDMPFDIGVMQYYYPGDYPSGYTRPNTTELYAGL 135 Query: 177 DAKWIAFKYSYSTGNTFGNADTRGSTYADLSVTHEL-FAGITGLAHIGRQRYTGSNASNL 235 + FKYS+S N FG A T+ S Y DLS L F G+T AH G Q N Sbjct: 136 GYGPLFFKYSHSLSNLFGFAGTQHSQYFDLSANVPLGFWGLTVNAHAGYQYV--RNLDQG 193 Query: 236 SYTDWKLGLTRDF-SGYVLGLAWTGSNAPDAGYT-LRGKNIGSNQWIASVNKSF 287 SY DWKLGLT+DF G+ LA+ +NA A YT G+++G + SV++SF Sbjct: 194 SYWDWKLGLTKDFGQGWSAQLAYVDTNANRAVYTNSHGRDMGRGGAVLSVSRSF 247