BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.4894.p (485 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_727518.1| dihydropyrimidinase [Ralstonia eutropha H16] >g... 739 0.0 ref|YP_002006542.1| dihydropyrimidinase [Cupriavidus taiwanensis... 730 0.0 ref|YP_004686824.1| D-hydantoinase HyuA [Cupriavidus necator N-1... 730 0.0 ref|YP_004418159.1| dihydropyrimidinase [Pusillimonas sp. T7-7] ... 681 0.0 ref|YP_002946156.1| phenylhydantoinase [Variovorax paradoxus S11... 670 0.0 >ref|YP_727518.1| dihydropyrimidinase [Ralstonia eutropha H16] emb|CAJ94150.1| D-Hydantoinase [Ralstonia eutropha H16] Length = 494 Score = 739 bits (1908), Expect = 0.0, Method: Composition-based stats. Identities = 343/462 (74%), Positives = 406/462 (87%), Gaps = 1/462 (0%) Query: 4 FDLVIRNGTVATASDIMQCDVGIKDGKVAMLGRGLPPGREEIDASGKLVLPGGVDAHCHL 63 FDL+IRNGTV TASD MQCD+GI G++ LG L + IDASGKLVLPGGVDAHCHL Sbjct: 20 FDLIIRNGTVVTASDTMQCDIGIAGGRIVQLGHDLGEAAQTIDASGKLVLPGGVDAHCHL 79 Query: 64 DQPMEEGLRMADDFRSGTISAACGGTTTVIPFAAQAKGGSLRAAVEDYHRRAEGKAVIDY 123 DQPM +GLRMADDF +G++SAACGGTTTVIPFAAQ KG SLRAAV DYH+RA+GKAV+DY Sbjct: 80 DQPMPDGLRMADDFGTGSVSAACGGTTTVIPFAAQEKGHSLRAAVNDYHQRADGKAVVDY 139 Query: 124 AFHMIVSDPSEEVLKNELPQLVREGYTSFKIYMTYDDLKLNDRQILDLLALARREGALVM 183 AFH+IV+DP+E VL++ELP L+REGY+SFK+YMTYDDLKLNDR+IL++L++AR+EGALVM Sbjct: 140 AFHLIVADPTEAVLQDELPGLIREGYSSFKVYMTYDDLKLNDREILEVLSVARQEGALVM 199 Query: 184 VHAENADCIGWLTEQLEEAGLTAPKHHAHSRPMMVEREATHRAIALSELVDVPILIVHVS 243 VHAEN+DCI WLTE+LE AG TAPK HA +RPM +EREATHRAI SELVDVPILIVHVS Sbjct: 200 VHAENSDCIAWLTEKLEAAGNTAPKFHALARPMAIEREATHRAITFSELVDVPILIVHVS 259 Query: 244 GREAIEQIRWAHGHGLRIHAETCPQYLVLTADHLDD-GYHGAKCVCSPPPRDKANQQYVW 302 G+EA+EQIRWA G++I AETCPQYL LTA+ LD GYHGAKCVCSPPPRD++NQ+ +W Sbjct: 260 GKEAVEQIRWARNRGMKIFAETCPQYLFLTAEDLDQPGYHGAKCVCSPPPRDRSNQEVIW 319 Query: 303 DGLASGLFTVFSSDHAPFRYDDPQGKKPGGKEVPFRYIPNGTPGLETRMPILFSEGVGKG 362 DGLA GLFT+FSSDHAPFRY+D QGKKPGGKEVPF+YIPNG PGLETR+P+LFS GV G Sbjct: 320 DGLADGLFTIFSSDHAPFRYEDAQGKKPGGKEVPFQYIPNGIPGLETRLPLLFSAGVVGG 379 Query: 363 RIDLNRFVALTATDPAKMYGLYPRKGTIAIGSDADIAVWDPHRQVTVSNSMLHHDVDYTP 422 RI +N+FVALT+T+PAK+YGL+PRKGTIAIG+DAD+A+WDP R+VT+ N+ LHH VDYTP Sbjct: 380 RISVNQFVALTSTNPAKLYGLHPRKGTIAIGADADLAIWDPQREVTIRNADLHHAVDYTP 439 Query: 423 YEGMQLTGWPVLTLSRGEIVWRDGEVLGTPGRGQFLPCGLPD 464 YEG+++TGWPV TL RG++V +GEVL G GQFLPCGLP+ Sbjct: 440 YEGLRVTGWPVTTLVRGKVVAHEGEVLAEAGHGQFLPCGLPE 481 >ref|YP_002006542.1| dihydropyrimidinase [Cupriavidus taiwanensis LMG 19424] emb|CAQ70481.1| phenylhydantoinase [Cupriavidus taiwanensis LMG 19424] Length = 478 Score = 730 bits (1885), Expect = 0.0, Method: Composition-based stats. Identities = 340/465 (73%), Positives = 404/465 (86%), Gaps = 1/465 (0%) Query: 1 MDSFDLVIRNGTVATASDIMQCDVGIKDGKVAMLGRGLPPGREEIDASGKLVLPGGVDAH 60 M FDL+IRNGTV TASD MQCD+GI G++ LG L + IDA GKLVLPGGVDAH Sbjct: 1 MKQFDLIIRNGTVVTASDTMQCDIGIAGGRIVQLGHDLGEAAQVIDAGGKLVLPGGVDAH 60 Query: 61 CHLDQPMEEGLRMADDFRSGTISAACGGTTTVIPFAAQAKGGSLRAAVEDYHRRAEGKAV 120 CHLDQPM +GLRMADDFR+G++SAACGGTTTVIPFAAQ KG SLRAAV+DYHRRA GK+V Sbjct: 61 CHLDQPMPDGLRMADDFRTGSVSAACGGTTTVIPFAAQEKGHSLRAAVDDYHRRAGGKSV 120 Query: 121 IDYAFHMIVSDPSEEVLKNELPQLVREGYTSFKIYMTYDDLKLNDRQILDLLALARREGA 180 +DYAFH+IV+DP+E VL +ELP L+REGY+SFKIYMTYDDLKLNDR+IL++L++AR+EGA Sbjct: 121 VDYAFHLIVADPTEAVLNDELPGLIREGYSSFKIYMTYDDLKLNDREILEVLSVARQEGA 180 Query: 181 LVMVHAENADCIGWLTEQLEEAGLTAPKHHAHSRPMMVEREATHRAIALSELVDVPILIV 240 LVMVHAEN+DCI WLT++L AG TAPK HA +RPM +EREATHRAI SELVDVPILIV Sbjct: 181 LVMVHAENSDCIAWLTDKLGAAGNTAPKFHALARPMAIEREATHRAITFSELVDVPILIV 240 Query: 241 HVSGREAIEQIRWAHGHGLRIHAETCPQYLVLTADHLDD-GYHGAKCVCSPPPRDKANQQ 299 HVSG+EA+EQIRWA G++I AETCPQYL LTA+ LD GYHGAKCVCSPPPRD++NQQ Sbjct: 241 HVSGKEAVEQIRWARNRGMKIFAETCPQYLFLTAEDLDQPGYHGAKCVCSPPPRDRSNQQ 300 Query: 300 YVWDGLASGLFTVFSSDHAPFRYDDPQGKKPGGKEVPFRYIPNGTPGLETRMPILFSEGV 359 +WDGLA GLFT+FSSDHAPFRY+D QGKKPGG+EVPF+YIPNG PGLETR+P+LFS GV Sbjct: 301 VIWDGLADGLFTIFSSDHAPFRYEDAQGKKPGGQEVPFQYIPNGIPGLETRLPLLFSAGV 360 Query: 360 GKGRIDLNRFVALTATDPAKMYGLYPRKGTIAIGSDADIAVWDPHRQVTVSNSMLHHDVD 419 GRI +N+FVALT+T+PAK+YGL+PRKGTIAIG+DAD+A+WDP R+VT+ N LHH VD Sbjct: 361 VGGRISVNQFVALTSTNPAKLYGLHPRKGTIAIGADADLAIWDPQREVTIRNEGLHHAVD 420 Query: 420 YTPYEGMQLTGWPVLTLSRGEIVWRDGEVLGTPGRGQFLPCGLPD 464 YTPYEG+++TGWPV T+ RG++V +GEV+ G G+FLPCGLP+ Sbjct: 421 YTPYEGLRVTGWPVTTVVRGKVVAHEGEVMAEAGHGEFLPCGLPE 465 >ref|YP_004686824.1| D-hydantoinase HyuA [Cupriavidus necator N-1] gb|AEI78343.1| D-hydantoinase HyuA [Cupriavidus necator N-1] Length = 478 Score = 730 bits (1884), Expect = 0.0, Method: Composition-based stats. Identities = 342/465 (73%), Positives = 402/465 (86%), Gaps = 1/465 (0%) Query: 1 MDSFDLVIRNGTVATASDIMQCDVGIKDGKVAMLGRGLPPGREEIDASGKLVLPGGVDAH 60 M FDL+IRNGTV TASD MQCD+GI G++ LG L + IDASGKLVLPGGVDAH Sbjct: 1 MKQFDLIIRNGTVVTASDTMQCDIGIAGGRIVQLGLDLGEAAQTIDASGKLVLPGGVDAH 60 Query: 61 CHLDQPMEEGLRMADDFRSGTISAACGGTTTVIPFAAQAKGGSLRAAVEDYHRRAEGKAV 120 CHLDQPM +GL+MAD FR+G++SAACGGTTTVIPFAAQ KG SLRAAV DYH+RA G+AV Sbjct: 61 CHLDQPMPDGLKMADGFRTGSVSAACGGTTTVIPFAAQEKGHSLRAAVTDYHQRAGGQAV 120 Query: 121 IDYAFHMIVSDPSEEVLKNELPQLVREGYTSFKIYMTYDDLKLNDRQILDLLALARREGA 180 +DYAFH+IVSDP+E VL +ELP L+REGY+SFKIYMTYDDLKLNDR+IL++L++AR+EG Sbjct: 121 VDYAFHLIVSDPTEAVLNDELPGLIREGYSSFKIYMTYDDLKLNDREILEVLSVARQEGG 180 Query: 181 LVMVHAENADCIGWLTEQLEEAGLTAPKHHAHSRPMMVEREATHRAIALSELVDVPILIV 240 LVMVHAEN+DCI WLTE+L AG TAPK HA +RPM +EREATHRAI SELVDVPILIV Sbjct: 181 LVMVHAENSDCIAWLTEKLGAAGNTAPKFHALARPMAIEREATHRAITFSELVDVPILIV 240 Query: 241 HVSGREAIEQIRWAHGHGLRIHAETCPQYLVLTADHLDD-GYHGAKCVCSPPPRDKANQQ 299 HVSG+EA+EQIRWA G++I AETCPQYL LTA+ LD GYHGAKCVCSPPPRD+ NQ+ Sbjct: 241 HVSGKEAVEQIRWARNRGMKIFAETCPQYLFLTAEDLDQPGYHGAKCVCSPPPRDRGNQE 300 Query: 300 YVWDGLASGLFTVFSSDHAPFRYDDPQGKKPGGKEVPFRYIPNGTPGLETRMPILFSEGV 359 +WDGLA GLFT+FSSDHAPFRY+D QGKKPGGKEVPF+YIPNG PGLETR+P+LFS GV Sbjct: 301 VIWDGLADGLFTIFSSDHAPFRYEDAQGKKPGGKEVPFQYIPNGIPGLETRLPLLFSAGV 360 Query: 360 GKGRIDLNRFVALTATDPAKMYGLYPRKGTIAIGSDADIAVWDPHRQVTVSNSMLHHDVD 419 GRI +N+FVALT+T+PAK+YGL+PRKGTIAIG+DAD+A+WDP R+VT+ N+ LHH VD Sbjct: 361 VGGRISVNQFVALTSTNPAKLYGLHPRKGTIAIGADADLAIWDPQREVTIRNADLHHAVD 420 Query: 420 YTPYEGMQLTGWPVLTLSRGEIVWRDGEVLGTPGRGQFLPCGLPD 464 YTPYEG+++TGWPV TL RG++V +GEVL G GQFLPCGLP+ Sbjct: 421 YTPYEGVRVTGWPVTTLVRGKVVAHEGEVLAEAGHGQFLPCGLPE 465 >ref|YP_004418159.1| dihydropyrimidinase [Pusillimonas sp. T7-7] gb|AEC21535.1| dihydropyrimidinase [Pusillimonas sp. T7-7] Length = 467 Score = 681 bits (1757), Expect = 0.0, Method: Composition-based stats. Identities = 321/461 (69%), Positives = 378/461 (81%), Gaps = 1/461 (0%) Query: 4 FDLVIRNGTVATASDIMQCDVGIKDGKVAMLGRGLPPGREEIDASGKLVLPGGVDAHCHL 63 FDL+I N + TASD D+GI++G++ LGRGL + +DASG L LPGGVDAHCHL Sbjct: 5 FDLLITNADIVTASDRFTSDIGIREGRIVALGRGLGDATQVVDASGLLALPGGVDAHCHL 64 Query: 64 DQPMEEGLRMADDFRSGTISAACGGTTTVIPFAAQAKGGSLRAAVEDYHRRAEGKAVIDY 123 DQPME GLRMADDF SG+ SAACGGTTT+IPFAAQ KG SLRAAVEDYHRRAEG++ +DY Sbjct: 65 DQPMEFGLRMADDFTSGSRSAACGGTTTIIPFAAQKKGQSLRAAVEDYHRRAEGRSCVDY 124 Query: 124 AFHMIVSDPSEEVLKNELPQLVREGYTSFKIYMTYDDLKLNDRQILDLLALARREGALVM 183 AFHMIVSDP+ +VL +ELP L+ EGYTSFK+YMTYDDLKLNDRQIL++L +ARR GALVM Sbjct: 125 AFHMIVSDPTPQVLNDELPALISEGYTSFKVYMTYDDLKLNDRQILEVLDVARRAGALVM 184 Query: 184 VHAENADCIGWLTEQLEEAGLTAPKHHAHSRPMMVEREATHRAIALSELVDVPILIVHVS 243 VHAEN+DCI WLT++L G TAP++H+ SRP VEREATHRAI SELVDVPILIVHVS Sbjct: 185 VHAENSDCISWLTDRLVAEGNTAPRYHSTSRPAAVEREATHRAITFSELVDVPILIVHVS 244 Query: 244 GREAIEQIRWAHGHGLRIHAETCPQYLVLTADHL-DDGYHGAKCVCSPPPRDKANQQYVW 302 G EAIEQIRWAHG G RI+AETCPQYL LTA+ L DGY GAKCVCSPPPRD +NQ+ VW Sbjct: 245 GSEAIEQIRWAHGRGQRIYAETCPQYLYLTAEDLGHDGYEGAKCVCSPPPRDASNQEAVW 304 Query: 303 DGLASGLFTVFSSDHAPFRYDDPQGKKPGGKEVPFRYIPNGTPGLETRMPILFSEGVGKG 362 LA +F+VFSSDHAPF +DDPQGKK GKE F++IPNG PGLETR+P+L+S GV G Sbjct: 305 RALAHNVFSVFSSDHAPFSFDDPQGKKLNGKEQKFQHIPNGIPGLETRLPLLYSGGVNGG 364 Query: 363 RIDLNRFVALTATDPAKMYGLYPRKGTIAIGSDADIAVWDPHRQVTVSNSMLHHDVDYTP 422 RI L++FVA+TAT PAK+YGLYPRKG+I IG+DADI +WDP R+V + N LHH VDYTP Sbjct: 365 RISLHQFVAMTATQPAKLYGLYPRKGSIMIGADADIVLWDPQRKVQIRNDRLHHKVDYTP 424 Query: 423 YEGMQLTGWPVLTLSRGEIVWRDGEVLGTPGRGQFLPCGLP 463 YEG +TGWPV+T SRG +V ++ + LG G G+F+PCG P Sbjct: 425 YEGRTVTGWPVMTFSRGRLVSKEFDFLGQAGDGEFMPCGKP 465 >ref|YP_002946156.1| phenylhydantoinase [Variovorax paradoxus S110] gb|ACS20890.1| dihydropyrimidinase [Variovorax paradoxus S110] Length = 475 Score = 670 bits (1728), Expect = 0.0, Method: Composition-based stats. Identities = 321/457 (70%), Positives = 381/457 (83%), Gaps = 3/457 (0%) Query: 4 FDLVIRNGTVATASDIMQCDVGIKDGKVAMLGRGLPPGREEIDASGKLVLPGGVDAHCHL 63 DLV+RN VATASD D+GI+DG++ LG LPPGR EIDA+G V PGGVDAHCHL Sbjct: 6 LDLVVRNARVATASDTFDSDIGIRDGRIVQLGLALPPGRREIDAAGGYVTPGGVDAHCHL 65 Query: 64 DQPMEEGLRMADDFRSGTISAACGGTTTVIPFAAQAKGGSLRAAVEDYHRRAEGKAVIDY 123 DQPME +RMADDF +GT +AACGGTTTVIPFAAQ KG SLRAAV+DYH+RAEG+A +D+ Sbjct: 66 DQPMEPPVRMADDFDTGTRAAACGGTTTVIPFAAQHKGQSLRAAVQDYHQRAEGRAHVDH 125 Query: 124 AFHMIVSDPSEEVLKNELPQLVREGYTSFKIYMTYDDLKLNDRQILDLLALARREGALVM 183 AFH+IVSDP+EEVLK+ELPQL+ EGYTSFKIYMTYDDLKL+D QILD+LA+AR GA+ M Sbjct: 126 AFHLIVSDPTEEVLKHELPQLIAEGYTSFKIYMTYDDLKLDDGQILDVLAVAREHGAMAM 185 Query: 184 VHAENADCIGWLTEQLEEAGLTAPKHHAHSRPMMVEREATHRAIALSELVDVPILIVHVS 243 +HAENADCI WLT++LE +G TAP+ HAH+RPM+VEREATHRAIALSELVDVPI+IVHVS Sbjct: 186 IHAENADCIEWLTKRLEASGRTAPRFHAHARPMLVEREATHRAIALSELVDVPIMIVHVS 245 Query: 244 GREAIEQIRWAHGHGLRIHAETCPQYLVLTADHL--DDGYHGAKCVCSPPPRDKANQQYV 301 GREA+EQIRWA HGL + AETCPQYL LTA+ L DD Y GA+CVCSPPPR++ NQQ + Sbjct: 246 GREAVEQIRWARAHGLSVFAETCPQYLFLTAEDLGIDDSYQGARCVCSPPPRNRENQQVI 305 Query: 302 WDGLASGLFTVFSSDHAPFRYDDPQGKKPGGKEVPFRYIPNGTPGLETRMPILFSEGVGK 361 W+GLA GLFT+FSSDHAPFRYD P+GKKPGG+EV FR+IPNG PG+ETR+P+LFS GV Sbjct: 306 WNGLADGLFTIFSSDHAPFRYDAPEGKKPGGEEVAFRHIPNGIPGIETRLPLLFSHGVLD 365 Query: 362 GRIDLNRFVALTATDPAKMYGLYPRKGTIAIGSDADIAVWDPHRQVTVSNSMLHHDVDYT 421 GRI +NRFV LT+T+PAK YGL+PRKGTIA+G+DAD+ VW + + N+ LHH VDYT Sbjct: 366 GRITINRFVELTSTNPAKAYGLHPRKGTIAVGADADLVVWGSTPR-AIRNADLHHAVDYT 424 Query: 422 PYEGMQLTGWPVLTLSRGEIVWRDGEVLGTPGRGQFL 458 PYEG+ + WP LTL+RGE+VW GRG+FL Sbjct: 425 PYEGIDVKAWPALTLARGEVVWDGERFHPRAGRGEFL 461