BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.4892.p (319 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777158.1| drug/metabolite transporter (DMT) superfamil... 416 e-114 ref|YP_003978342.1| hypothetical protein AXYL_02306 [Achromobact... 254 1e-65 gb|EFV83767.1| membrane protein [Achromobacter xylosoxidans C54] 254 1e-65 ref|ZP_06687118.1| conserved hypothetical protein [Achromobacter... 252 5e-65 gb|EGP44514.1| hypothetical protein AXXA_20556 [Achromobacter xy... 251 9e-65 >ref|YP_003777158.1| drug/metabolite transporter (DMT) superfamily permease [Herbaspirillum seropedicae SmR1] gb|ADJ65250.1| permease of the drug/metabolite transporter (DMT) superfamily protein [Herbaspirillum seropedicae SmR1] Length = 324 Score = 416 bits (1069), Expect = e-114, Method: Composition-based stats. Identities = 275/298 (92%), Positives = 287/298 (96%) Query: 22 MSRLFLVCVVVAICIWGGNWPVMKFGSQFIPPLWFAASRFLSAAILSFIIAAALGKLRLP 81 MSRLFLVCVV+AICIWGGNWPVMKFGSQFIPPLWFAASRFLSAAILSF+IA LGKLRLP Sbjct: 27 MSRLFLVCVVLAICIWGGNWPVMKFGSQFIPPLWFAASRFLSAAILSFVIAVVLGKLRLP 86 Query: 82 TRQEWPVVAGVGVLQMGLFTALVTGALHFVMPGRASLIAYATSIWVVPGAALVLKHKLST 141 TRQEWPVV GVGVLQMGLFTALVTGALHFVMPGRASLIAYATSIWVVPGAALVLK KLS Sbjct: 87 TRQEWPVVVGVGVLQMGLFTALVTGALHFVMPGRASLIAYATSIWVVPGAALVLKQKLSP 146 Query: 142 QQSLATVCSYAGMAVIVLPALLHADMHSMIGYLMLGAASLSWAMNILQIKMTPGVKLDFD 201 QQSLATVCSYAGMAVIVLPALLHAD+HSMIGYLMLG ASLSWAMNILQIKM+PGVKLDF Sbjct: 147 QQSLATVCSYAGMAVIVLPALLHADLHSMIGYLMLGVASLSWAMNILQIKMSPGVKLDFA 206 Query: 202 LLPWQTLVAAVPLSVLALLVDGAPTFLADPHSWGVIAYTGPLATALTFLIVLQMTQRLSP 261 LLPWQTLVAA+PLS+LAL VDGAP+FLADPH+WGVIAYTGPLATALTFLIVLQMTQRLSP Sbjct: 207 LLPWQTLVAALPLSLLALAVDGAPSFLADPHAWGVIAYTGPLATALTFLIVLQMTQRLSP 266 Query: 262 VTVSVCMLGVPVVGLTLSSLVFGETLSADLLLGMGLLCLGLVLPALPSLGLRRVLSKA 319 VTVSVCMLGVPVVGLTLSSLVFGE LS+DL+LGMGLLCLGLVLPALPSLGLRR+ +K Sbjct: 267 VTVSVCMLGVPVVGLTLSSLVFGERLSSDLVLGMGLLCLGLVLPALPSLGLRRLATKG 324 >ref|YP_003978342.1| hypothetical protein AXYL_02306 [Achromobacter xylosoxidans A8] gb|ADP15627.1| hypothetical protein AXYL_02306 [Achromobacter xylosoxidans A8] Length = 303 Score = 254 bits (649), Expect = 1e-65, Method: Composition-based stats. Identities = 160/269 (59%), Positives = 203/269 (75%) Query: 30 VVVAICIWGGNWPVMKFGSQFIPPLWFAASRFLSAAILSFIIAAALGKLRLPTRQEWPVV 89 +V A+ IWGGNWPVMK G + PLW AASRF SAA++S ++ LG+LRLPTRQEWP+V Sbjct: 13 LVGAVAIWGGNWPVMKLGLTHMSPLWLAASRFGSAALISALVLGMLGRLRLPTRQEWPLV 72 Query: 90 AGVGVLQMGLFTALVTGALHFVMPGRASLIAYATSIWVVPGAALVLKHKLSTQQSLATVC 149 AGV +LQMG FTAL AL +V PGRAS+IAYATSIWV+P ++L+LK +LS Q LAT Sbjct: 73 AGVALLQMGAFTALALWALQYVAPGRASVIAYATSIWVIPLSSLILKERLSLAQWLATAL 132 Query: 150 SYAGMAVIVLPALLHADMHSMIGYLMLGAASLSWAMNILQIKMTPGVKLDFDLLPWQTLV 209 SYAG+ VIV PA H++IG ML AS +WA NI+Q++ ++L D++PWQT + Sbjct: 133 SYAGIVVIVAPAFSPWQAHTVIGLAMLLGASFAWACNIIQLRGNRHIRLGADMIPWQTAI 192 Query: 210 AAVPLSVLALLVDGAPTFLADPHSWGVIAYTGPLATALTFLIVLQMTQRLSPVTVSVCML 269 AA+PL+ LA L DGAP FLA+P +W VI YTGPLATALTF++VL MTQ++ PV S+ ML Sbjct: 193 AALPLAALAWLRDGAPVFLAEPQAWPVILYTGPLATALTFIVVLGMTQKMPPVATSIAML 252 Query: 270 GVPVVGLTLSSLVFGETLSADLLLGMGLL 298 VPV+GL +SSLVF E +SADL LG+ L+ Sbjct: 253 CVPVIGLIVSSLVFQERISADLALGLALI 281 >gb|EFV83767.1| membrane protein [Achromobacter xylosoxidans C54] Length = 304 Score = 254 bits (649), Expect = 1e-65, Method: Composition-based stats. Identities = 167/277 (60%), Positives = 206/277 (74%) Query: 33 AICIWGGNWPVMKFGSQFIPPLWFAASRFLSAAILSFIIAAALGKLRLPTRQEWPVVAGV 92 A+ IWGGNWPVMK G + PLW AASRF SAA++S ++ AAL +LR PTRQEWP+VAGV Sbjct: 19 AVMIWGGNWPVMKLGLAHMSPLWLAASRFGSAALISVVVLAALRRLRWPTRQEWPLVAGV 78 Query: 93 GVLQMGLFTALVTGALHFVMPGRASLIAYATSIWVVPGAALVLKHKLSTQQSLATVCSYA 152 +LQMG FTAL AL +V PGRAS+IAYATSIWV+P ++LVLK +LS Q LAT SYA Sbjct: 79 ALLQMGAFTALALWALQYVAPGRASVIAYATSIWVIPLSSLVLKERLSAAQWLATALSYA 138 Query: 153 GMAVIVLPALLHADMHSMIGYLMLGAASLSWAMNILQIKMTPGVKLDFDLLPWQTLVAAV 212 G+ VIV PA H++IG +ML AS +WA NI+Q++ V+L D++PWQT +A V Sbjct: 139 GIGVIVAPAFSPWQAHTVIGLVMLLGASFAWACNIIQLRGNRHVRLGADMIPWQTAIATV 198 Query: 213 PLSVLALLVDGAPTFLADPHSWGVIAYTGPLATALTFLIVLQMTQRLSPVTVSVCMLGVP 272 PL+ LA L DGAP FLA P +W VI YTGPLATALTF++VL MTQ+L PV S+ ML VP Sbjct: 199 PLAALAWLRDGAPLFLAVPDAWPVILYTGPLATALTFIVVLGMTQKLPPVATSIAMLCVP 258 Query: 273 VVGLTLSSLVFGETLSADLLLGMGLLCLGLVLPALPS 309 V+GL +SSLVF E +S DL LG+GL+ L +V AL S Sbjct: 259 VIGLIVSSLVFHERISPDLALGLGLIALSVVGSALAS 295 >ref|ZP_06687118.1| conserved hypothetical protein [Achromobacter piechaudii ATCC 43553] gb|EFF75968.1| conserved hypothetical protein [Achromobacter piechaudii ATCC 43553] Length = 303 Score = 252 bits (644), Expect = 5e-65, Method: Composition-based stats. Identities = 151/258 (58%), Positives = 195/258 (75%) Query: 33 AICIWGGNWPVMKFGSQFIPPLWFAASRFLSAAILSFIIAAALGKLRLPTRQEWPVVAGV 92 A+ +WGGNWPVMK G + PLW AASRF SAA++S ++ AA+G+LR PTRQEWP+VAGV Sbjct: 16 AVMVWGGNWPVMKMGLAHMSPLWLAASRFGSAALVSVLVLAAVGRLRFPTRQEWPLVAGV 75 Query: 93 GVLQMGLFTALVTGALHFVMPGRASLIAYATSIWVVPGAALVLKHKLSTQQSLATVCSYA 152 +LQMG FTAL AL +V PGRAS++AYATSIWV+P +AL+LK +L+ Q LAT SYA Sbjct: 76 ALLQMGAFTALALWALQYVAPGRASVVAYATSIWVIPLSALILKERLNAGQWLATGLSYA 135 Query: 153 GMAVIVLPALLHADMHSMIGYLMLGAASLSWAMNILQIKMTPGVKLDFDLLPWQTLVAAV 212 G+ VIV PA H+++G +ML AS +WA NI+Q++ V+L D++PWQT +A V Sbjct: 136 GIGVIVAPAFSPWQAHTVVGLIMLLGASFAWACNIIQLRGHRHVRLGADMIPWQTALATV 195 Query: 213 PLSVLALLVDGAPTFLADPHSWGVIAYTGPLATALTFLIVLQMTQRLSPVTVSVCMLGVP 272 PL+ LA L DGAP FLA P +W +I YTGPLATALTF++VL MTQ++ PV S+ ML VP Sbjct: 196 PLAALAWLRDGAPGFLAVPDAWPIILYTGPLATALTFIVVLGMTQKMPPVATSIAMLCVP 255 Query: 273 VVGLTLSSLVFGETLSAD 290 V+GL +SS+VF E +SAD Sbjct: 256 VIGLIVSSVVFHERISAD 273 >gb|EGP44514.1| hypothetical protein AXXA_20556 [Achromobacter xylosoxidans AXX-A] Length = 297 Score = 251 bits (642), Expect = 9e-65, Method: Composition-based stats. Identities = 163/277 (58%), Positives = 205/277 (74%) Query: 33 AICIWGGNWPVMKFGSQFIPPLWFAASRFLSAAILSFIIAAALGKLRLPTRQEWPVVAGV 92 A+ IWGGNWPVMK G + PLW AASRF SAA++S ++ LG+LRLPTRQEWP+VAGV Sbjct: 10 AVMIWGGNWPVMKLGLAHMSPLWLAASRFGSAALISALVLGLLGRLRLPTRQEWPLVAGV 69 Query: 93 GVLQMGLFTALVTGALHFVMPGRASLIAYATSIWVVPGAALVLKHKLSTQQSLATVCSYA 152 +LQMG FTAL AL +V PGRAS+IAYATSIWV+P ++LVLK +LS Q LAT SYA Sbjct: 70 ALLQMGAFTALALWALQYVAPGRASVIAYATSIWVIPLSSLVLKERLSPAQWLATALSYA 129 Query: 153 GMAVIVLPALLHADMHSMIGYLMLGAASLSWAMNILQIKMTPGVKLDFDLLPWQTLVAAV 212 G+ VIV PA H++IG +ML AS +WA NI+Q++ V+L D++PWQT +A V Sbjct: 130 GIGVIVAPAFSPWQAHTVIGLVMLLGASFAWACNIIQLRGNRHVRLGADMIPWQTAIATV 189 Query: 213 PLSVLALLVDGAPTFLADPHSWGVIAYTGPLATALTFLIVLQMTQRLSPVTVSVCMLGVP 272 PL+ LA L DGAP FL P +W VI YTGPLATALTF++VL MTQ+L PV S+ ML VP Sbjct: 190 PLAALAWLRDGAPAFLGVPDAWPVILYTGPLATALTFIVVLGMTQKLPPVATSIAMLCVP 249 Query: 273 VVGLTLSSLVFGETLSADLLLGMGLLCLGLVLPALPS 309 V+GL +SS+VF E LS DL+LG+GL+ L + A+ + Sbjct: 250 VIGLIVSSVVFHEHLSPDLMLGLGLIALSVAGSAVAA 286