BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.4883.p (465 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777148.1| major facilitator superfamily permease [Herb... 833 0.0 ref|YP_001862487.1| major facilitator transporter [Burkholderia ... 722 0.0 ref|YP_001565453.1| major facilitator transporter [Delftia acido... 719 0.0 ref|YP_001892826.1| major facilitator superfamily MFS_1 [Ralston... 716 0.0 ref|YP_004487742.1| major facilitator superfamily protein [Delft... 702 0.0 >ref|YP_003777148.1| major facilitator superfamily permease [Herbaspirillum seropedicae SmR1] gb|ADJ65240.1| permease of the major facilitator superfamily protein [Herbaspirillum seropedicae SmR1] Length = 465 Score = 833 bits (2151), Expect = 0.0, Method: Composition-based stats. Identities = 439/465 (94%), Positives = 455/465 (97%) Query: 1 MQSSHSSDHSQQSKKAAASGWIGSALEYYDFFIYATAASLIFPQLFFPKGDPTTAIIASL 60 MQS+ S+ H QQSKKAAASGWIGSALEYYDFFIYATAASLIFPQLFFPKGDPTTAIIASL Sbjct: 1 MQSTQSNAHHQQSKKAAASGWIGSALEYYDFFIYATAASLIFPQLFFPKGDPTTAIIASL 60 Query: 61 ATYGVGYVARPIGAFVLGHLGDTHGRKKVLLWCMFLMGFSTIGVGLLPTYDQVGLWAPAL 120 ATYGVGYVARPIGAFVLGHLGDTHGRKKVLLWCMFLMGFSTIGVGLLPTYDQVGLWAPAL Sbjct: 61 ATYGVGYVARPIGAFVLGHLGDTHGRKKVLLWCMFLMGFSTIGVGLLPTYDQVGLWAPAL 120 Query: 121 LVIMRLAQGFAVAGEISGASSMILEHSPFGRRGYYSSFTLQGVQAGQILAAAVFLPLAHY 180 LVIMRLAQGFAVAGEISGASSMILEHSPFGRRGY+SSFTLQGVQAGQILAAAVFLPLAHY Sbjct: 121 LVIMRLAQGFAVAGEISGASSMILEHSPFGRRGYFSSFTLQGVQAGQILAAAVFLPLAHY 180 Query: 181 MPAEQFNVWGWRIPFLLSFLVIIAGWIIRRTVEETPLFKAADKNELKRRSPVVEAFRDSS 240 MPAEQFNVWGWRIPFLLSFLVIIAGW+IRRTV+ETP+FKAADK ELKRRSPVV+AFRD S Sbjct: 181 MPAEQFNVWGWRIPFLLSFLVIIAGWVIRRTVDETPVFKAADKEELKRRSPVVDAFRDCS 240 Query: 241 PNMLRVVCMALMNVIPVVATIFGAAYAVQPAYGIGFAKDVYLWIPVVGNIVAVLVIPYVG 300 PNMLRVVCMALMNVIPVVATIFGAAYAVQPAYGIGFAKDVYLWIPVVGNIVAVLVIPYVG Sbjct: 241 PNMLRVVCMALMNVIPVVATIFGAAYAVQPAYGIGFAKDVYLWIPVVGNIVAVLVIPYVG 300 Query: 301 KLSDRIGRRPPIIVGSLLAGLFAFAYLYAISIRNVELAFVMSILMWGVVYQGYNAVFPSF 360 KLSDRIGRRPPIIVGSLLAGLFAFAYLYAISIRNVELAFVMSILMWGVVYQGYNAVFPSF Sbjct: 301 KLSDRIGRRPPIIVGSLLAGLFAFAYLYAISIRNVELAFVMSILMWGVVYQGYNAVFPSF 360 Query: 361 YPELFPARSRVSAMAIAQNVGTAITAMLPALFTAVAPPGSSNIWLTVGSIAFGITIVSAL 420 YPELFPAR+RVSAMAIAQN+GTAITAMLPALFTAVAPPGSSNIWLTVGSIAF ITIVSAL Sbjct: 361 YPELFPARARVSAMAIAQNLGTAITAMLPALFTAVAPPGSSNIWLTVGSIAFAITIVSAL 420 Query: 421 AALSARETYRIPLEKLGERDAQPMPLNEYERLRAQADLEGRYAKS 465 AALSARETYRIPLEKL + +AQP+P NEY+RLRA+A++ GRYAKS Sbjct: 421 AALSARETYRIPLEKLDDPNAQPLPRNEYDRLRAEAEVAGRYAKS 465 >ref|YP_001862487.1| major facilitator transporter [Burkholderia phymatum STM815] gb|ACC75441.1| major facilitator superfamily MFS_1 [Burkholderia phymatum STM815] Length = 461 Score = 722 bits (1863), Expect = 0.0, Method: Composition-based stats. Identities = 373/451 (82%), Positives = 414/451 (91%) Query: 4 SHSSDHSQQSKKAAASGWIGSALEYYDFFIYATAASLIFPQLFFPKGDPTTAIIASLATY 63 +H QSKKAAASGWIGSALEYYDFFIYATA++LIFPQ+FF KG+ TTAI+ASLATY Sbjct: 6 AHEPHGKHQSKKAAASGWIGSALEYYDFFIYATASALIFPQIFFAKGNATTAIVASLATY 65 Query: 64 GVGYVARPIGAFVLGHLGDTHGRKKVLLWCMFLMGFSTIGVGLLPTYDQVGLWAPALLVI 123 GVGYVARPIGAFVLGHLGDTHGRK VLLWCMF+MGFSTIGVGLLPTY+QVG+ AP LLVI Sbjct: 66 GVGYVARPIGAFVLGHLGDTHGRKNVLLWCMFMMGFSTIGVGLLPTYEQVGVLAPVLLVI 125 Query: 124 MRLAQGFAVAGEISGASSMILEHSPFGRRGYYSSFTLQGVQAGQILAAAVFLPLAHYMPA 183 +RL QGFAVAGEISGASSMILEH+PFGRRG+YSSFTLQGVQAGQILAAAVFLPLAHYMPA Sbjct: 126 LRLVQGFAVAGEISGASSMILEHAPFGRRGFYSSFTLQGVQAGQILAAAVFLPLAHYMPA 185 Query: 184 EQFNVWGWRIPFLLSFLVIIAGWIIRRTVEETPLFKAADKNELKRRSPVVEAFRDSSPNM 243 +QFN WGWRIPFLLSF+VIIAGWIIRR V+ETP FK K E + RSPVV+AF+ S PNM Sbjct: 186 DQFNTWGWRIPFLLSFVVIIAGWIIRRKVDETPAFKEEGKRETRPRSPVVDAFKYSWPNM 245 Query: 244 LRVVCMALMNVIPVVATIFGAAYAVQPAYGIGFAKDVYLWIPVVGNIVAVLVIPYVGKLS 303 LRVVCM+LMNVIPVVATIFGAAYAVQPAYGIGFAKDVYLWIPVVGNIVAV+VIPYVG LS Sbjct: 246 LRVVCMSLMNVIPVVATIFGAAYAVQPAYGIGFAKDVYLWIPVVGNIVAVIVIPYVGNLS 305 Query: 304 DRIGRRPPIIVGSLLAGLFAFAYLYAISIRNVELAFVMSILMWGVVYQGYNAVFPSFYPE 363 D+IGR+PP+IVGSLLAGL AFAYLYAISI NV AFVMS+LMWGVVYQGYNAVFPSFYPE Sbjct: 306 DKIGRKPPMIVGSLLAGLLAFAYLYAISIHNVPFAFVMSLLMWGVVYQGYNAVFPSFYPE 365 Query: 364 LFPARSRVSAMAIAQNVGTAITAMLPALFTAVAPPGSSNIWLTVGSIAFGITIVSALAAL 423 LFP R+RVSAMAIAQNVGTAITAMLPALFTAVAPPG++NIWLTVG++AF +T++++LAA Sbjct: 366 LFPTRTRVSAMAIAQNVGTAITAMLPALFTAVAPPGAANIWLTVGALAFAVTVIASLAAF 425 Query: 424 SARETYRIPLEKLGERDAQPMPLNEYERLRA 454 SARETYR+ + LG+ DA+P+ +EY+RLRA Sbjct: 426 SARETYRVHMNDLGQPDAKPVEKSEYDRLRA 456 >ref|YP_001565453.1| major facilitator transporter [Delftia acidovorans SPH-1] gb|ABX37068.1| major facilitator superfamily MFS_1 [Delftia acidovorans SPH-1] Length = 464 Score = 719 bits (1856), Expect = 0.0, Method: Composition-based stats. Identities = 379/452 (83%), Positives = 409/452 (90%) Query: 5 HSSDHSQQSKKAAASGWIGSALEYYDFFIYATAASLIFPQLFFPKGDPTTAIIASLATYG 64 H+ Q +KAA SGWIGSALEYYDFFIYATAA+LIFPQ+FFP+GDP AIIASLATYG Sbjct: 7 HTQPTGHQPRKAATSGWIGSALEYYDFFIYATAAALIFPQIFFPQGDPAIAIIASLATYG 66 Query: 65 VGYVARPIGAFVLGHLGDTHGRKKVLLWCMFLMGFSTIGVGLLPTYDQVGLWAPALLVIM 124 VGYVARPIGAFVLGHLGDTHGRK+VL+WCMFLMGFSTI VGLLPTYDQVGLWAPALLV+M Sbjct: 67 VGYVARPIGAFVLGHLGDTHGRKQVLVWCMFLMGFSTIAVGLLPTYDQVGLWAPALLVLM 126 Query: 125 RLAQGFAVAGEISGASSMILEHSPFGRRGYYSSFTLQGVQAGQILAAAVFLPLAHYMPAE 184 RL QGFAVAGEISGASSMILEH+PFGRRG+++SFTLQGVQAGQILAAAVFLPLAHYMP E Sbjct: 127 RLIQGFAVAGEISGASSMILEHAPFGRRGFFASFTLQGVQAGQILAAAVFLPLAHYMPTE 186 Query: 185 QFNVWGWRIPFLLSFLVIIAGWIIRRTVEETPLFKAADKNELKRRSPVVEAFRDSSPNML 244 QFN WGWRIPF+LSF+VIIAGWIIRR V ETP F AA ++E + RSPVVEAFR SP+ML Sbjct: 187 QFNSWGWRIPFILSFVVIIAGWIIRREVNETPAFTAAGRSEARPRSPVVEAFRHHSPDML 246 Query: 245 RVVCMALMNVIPVVATIFGAAYAVQPAYGIGFAKDVYLWIPVVGNIVAVLVIPYVGKLSD 304 RVVCMALMNVIPVVATIFGAAYAVQPAYGIGFAKD+YLWIPVVGNIVAVLVIP VG LSD Sbjct: 247 RVVCMALMNVIPVVATIFGAAYAVQPAYGIGFAKDMYLWIPVVGNIVAVLVIPMVGNLSD 306 Query: 305 RIGRRPPIIVGSLLAGLFAFAYLYAISIRNVELAFVMSILMWGVVYQGYNAVFPSFYPEL 364 RIGRRPPII G+LL+GL A YLYAIS RN+ LAF MSILMWGVVYQGYNAVFPSFYPEL Sbjct: 307 RIGRRPPIIFGALLSGLLAIGYLYAISTRNMPLAFAMSILMWGVVYQGYNAVFPSFYPEL 366 Query: 365 FPARSRVSAMAIAQNVGTAITAMLPALFTAVAPPGSSNIWLTVGSIAFGITIVSALAALS 424 FP R+RVSAMAI+QNVGTAITAMLPALFTAVAPPG+ NIWLTVG IAFGIT+V+ALAA S Sbjct: 367 FPTRTRVSAMAISQNVGTAITAMLPALFTAVAPPGAHNIWLTVGLIAFGITVVAALAAWS 426 Query: 425 ARETYRIPLEKLGERDAQPMPLNEYERLRAQA 456 ARETYR+ +E LGE AQP+ EYERLR QA Sbjct: 427 ARETYRVRMEDLGEAGAQPVDAAEYERLRTQA 458 >ref|YP_001892826.1| major facilitator superfamily MFS_1 [Ralstonia pickettii 12J] ref|YP_002984327.1| major facilitator superfamily protein [Ralstonia pickettii 12D] gb|ACD29399.1| major facilitator superfamily MFS_1 [Ralstonia pickettii 12J] gb|ACS65655.1| major facilitator superfamily MFS_1 [Ralstonia pickettii 12D] Length = 461 Score = 716 bits (1847), Expect = 0.0, Method: Composition-based stats. Identities = 373/453 (82%), Positives = 416/453 (91%) Query: 4 SHSSDHSQQSKKAAASGWIGSALEYYDFFIYATAASLIFPQLFFPKGDPTTAIIASLATY 63 +H QSKKAAASGWIGSALEYYDFFIYATAA+LIFPQ+FFPKGDP TAIIASLATY Sbjct: 6 AHEPLGKHQSKKAAASGWIGSALEYYDFFIYATAAALIFPQIFFPKGDPKTAIIASLATY 65 Query: 64 GVGYVARPIGAFVLGHLGDTHGRKKVLLWCMFLMGFSTIGVGLLPTYDQVGLWAPALLVI 123 GVGY+ARPIGAFVLGHLGDTHGRK VLLWCMFLMGFSTI VGLLPTYDQVGLWAP LLVI Sbjct: 66 GVGYIARPIGAFVLGHLGDTHGRKNVLLWCMFLMGFSTIAVGLLPTYDQVGLWAPTLLVI 125 Query: 124 MRLAQGFAVAGEISGASSMILEHSPFGRRGYYSSFTLQGVQAGQILAAAVFLPLAHYMPA 183 MRL QGFAVAGEISGASSMILEH+PFGRRG+++SFTLQGVQAGQILAAAVFLPLAHYMPA Sbjct: 126 MRLIQGFAVAGEISGASSMILEHAPFGRRGFFASFTLQGVQAGQILAAAVFLPLAHYMPA 185 Query: 184 EQFNVWGWRIPFLLSFLVIIAGWIIRRTVEETPLFKAADKNELKRRSPVVEAFRDSSPNM 243 +QFN WGWRIPFLLSF+VIIAG++IRR V ETP F A + + + RSPV++AF+ S+P+M Sbjct: 186 DQFNSWGWRIPFLLSFVVIIAGYVIRREVHETPAFTAEQQQQGRPRSPVIDAFKYSTPDM 245 Query: 244 LRVVCMALMNVIPVVATIFGAAYAVQPAYGIGFAKDVYLWIPVVGNIVAVLVIPYVGKLS 303 LRVVCMALMNVIPVVATIFGAAYAVQPAYGIGFAKD+YLWIPVVGNIVAVLVIPYVG LS Sbjct: 246 LRVVCMALMNVIPVVATIFGAAYAVQPAYGIGFAKDIYLWIPVVGNIVAVLVIPYVGDLS 305 Query: 304 DRIGRRPPIIVGSLLAGLFAFAYLYAISIRNVELAFVMSILMWGVVYQGYNAVFPSFYPE 363 DRIGR+PPI++GSLLAG+ AFAYLYAISI+NV LAF MSILMWGVVYQGYNAVFPSFYPE Sbjct: 306 DRIGRKPPIVLGSLLAGVLAFAYLYAISIKNVPLAFGMSILMWGVVYQGYNAVFPSFYPE 365 Query: 364 LFPARSRVSAMAIAQNVGTAITAMLPALFTAVAPPGSSNIWLTVGSIAFGITIVSALAAL 423 LFP R+RVSAMAI+QN+GTAITAMLPALFTAVAPPG++NIWLTVG+IAFG+T+++A+AA+ Sbjct: 366 LFPTRTRVSAMAISQNIGTAITAMLPALFTAVAPPGATNIWLTVGAIAFGVTVIAAVAAM 425 Query: 424 SARETYRIPLEKLGERDAQPMPLNEYERLRAQA 456 +ARETYRI ++ LG+ AQP+ EY R RA A Sbjct: 426 TARETYRIHMDDLGQPAAQPVDKAEYARQRAGA 458 >ref|YP_004487742.1| major facilitator superfamily protein [Delftia sp. Cs1-4] gb|AEF89387.1| major facilitator superfamily MFS_1 [Delftia sp. Cs1-4] Length = 462 Score = 702 bits (1813), Expect = 0.0, Method: Composition-based stats. Identities = 366/445 (82%), Positives = 406/445 (91%) Query: 12 QSKKAAASGWIGSALEYYDFFIYATAASLIFPQLFFPKGDPTTAIIASLATYGVGYVARP 71 Q KAA SGWIGSALEYYDFFIYATAA+L+FPQ+FFP+GDP AIIASLATYGVGYVARP Sbjct: 14 QPGKAATSGWIGSALEYYDFFIYATAAALVFPQIFFPQGDPAIAIIASLATYGVGYVARP 73 Query: 72 IGAFVLGHLGDTHGRKKVLLWCMFLMGFSTIGVGLLPTYDQVGLWAPALLVIMRLAQGFA 131 IGAFVLGHLGDTHGRK+VL+WCMFLMGFSTI VGLLPTYDQVGLWAPALLV+MRL QGFA Sbjct: 74 IGAFVLGHLGDTHGRKQVLVWCMFLMGFSTIAVGLLPTYDQVGLWAPALLVLMRLIQGFA 133 Query: 132 VAGEISGASSMILEHSPFGRRGYYSSFTLQGVQAGQILAAAVFLPLAHYMPAEQFNVWGW 191 VAGEISGAS+MILEH+PFGRRG+++ FTLQGVQAGQILAAAVFLPL HYMPAEQFN WGW Sbjct: 134 VAGEISGASAMILEHAPFGRRGFFACFTLQGVQAGQILAAAVFLPLVHYMPAEQFNSWGW 193 Query: 192 RIPFLLSFLVIIAGWIIRRTVEETPLFKAADKNELKRRSPVVEAFRDSSPNMLRVVCMAL 251 R+PF+LSF+VIIAGWIIRR V ETP F A + + SPVV+AFR SP+MLRVVCMAL Sbjct: 194 RVPFILSFVVIIAGWIIRREVNETPAFTHAGARKERAPSPVVDAFRHHSPDMLRVVCMAL 253 Query: 252 MNVIPVVATIFGAAYAVQPAYGIGFAKDVYLWIPVVGNIVAVLVIPYVGKLSDRIGRRPP 311 MNVIPVVATIFGA YAVQPAYGIGFAKD+YLWIPVVGNIVAVLVIP+VG LSDRIGRRP Sbjct: 254 MNVIPVVATIFGATYAVQPAYGIGFAKDIYLWIPVVGNIVAVLVIPFVGSLSDRIGRRPL 313 Query: 312 IIVGSLLAGLFAFAYLYAISIRNVELAFVMSILMWGVVYQGYNAVFPSFYPELFPARSRV 371 IIVG+LL+GL AF YLYAISIRN+ LAFVMSILMWGVVYQG+NAV+PSFYPELFP R+RV Sbjct: 314 IIVGALLSGLLAFGYLYAISIRNMPLAFVMSILMWGVVYQGHNAVYPSFYPELFPTRTRV 373 Query: 372 SAMAIAQNVGTAITAMLPALFTAVAPPGSSNIWLTVGSIAFGITIVSALAALSARETYRI 431 SAMAI+ N+GTAITAMLPALFTAVAPPGS+N+WLTVG+I FGITI++ALAA SARETYRI Sbjct: 374 SAMAISHNIGTAITAMLPALFTAVAPPGSANVWLTVGAITFGITILAALAAWSARETYRI 433 Query: 432 PLEKLGERDAQPMPLNEYERLRAQA 456 +E+LGE A+ + +EY+RLRAQA Sbjct: 434 RMEELGEPGARAVEASEYDRLRAQA 458