BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.4878.p         (152 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003775617.1| organic radical activating enzyme protein [H...   158   2e-37
ref|YP_002981354.1| hypothetical protein Rpic12D_1394 [Ralstonia...   127   5e-28
ref|YP_001898904.1| hypothetical protein Rpic_1329 [Ralstonia pi...   127   7e-28
gb|AEG69203.1| organic radical activating enzyme protein [Ralsto...   126   9e-28
emb|CBJ38699.1| conserved protein of unknown function (Organic r...   125   2e-27

>ref|YP_003775617.1| organic radical activating enzyme protein [Herbaspirillum
           seropedicae SmR1]
 gb|ADJ63709.1| organic radical activating enzyme protein [Herbaspirillum
           seropedicae SmR1]
          Length = 229

 Score =  158 bits (400), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 76/82 (92%), Positives = 79/82 (96%)

Query: 1   MHAVGFEIAIETNGTIEVPQGVDWICVSPKMGSELKVKRGSELKVVVPQPGQPLDEYEKL 60
           MHAVGFEIAIETNGTI+VP GVDWICVSPKMGSELKV+RGSELKVVVPQPGQPLDEYEKL
Sbjct: 125 MHAVGFEIAIETNGTIDVPDGVDWICVSPKMGSELKVRRGSELKVVVPQPGQPLDEYEKL 184

Query: 61  DFQHFLLQPMDGLQAAANSARA 82
           DFQHFLLQPMDGLQAAAN+  A
Sbjct: 185 DFQHFLLQPMDGLQAAANTRLA 206


>ref|YP_002981354.1| hypothetical protein Rpic12D_1394 [Ralstonia pickettii 12D]
 ref|ZP_07676817.1| GntS [Ralstonia sp. 5_7_47FAA]
 gb|ACS62682.1| conserved hypothetical protein [Ralstonia pickettii 12D]
 gb|EFP64820.1| GntS [Ralstonia sp. 5_7_47FAA]
          Length = 212

 Score =  127 bits (320), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 63/93 (67%), Positives = 71/93 (76%)

Query: 1   MHAVGFEIAIETNGTIEVPQGVDWICVSPKMGSELKVKRGSELKVVVPQPGQPLDEYEKL 60
           +HA GFEIAIETNGTI VP+G+DW+CVSPKMGSEL V RG ELKVV+PQ GQ LD YE+L
Sbjct: 108 LHARGFEIAIETNGTITVPEGIDWVCVSPKMGSELVVTRGDELKVVIPQDGQDLDAYERL 167

Query: 61  DFQHFLLQPMDGLQAAANSARARARARARARAR 93
           DFQHF LQ MDG  A  N+A A    + R R R
Sbjct: 168 DFQHFFLQAMDGPLARQNTAAAVELCQRRPRWR 200


>ref|YP_001898904.1| hypothetical protein Rpic_1329 [Ralstonia pickettii 12J]
 gb|ACD26472.1| conserved hypothetical protein [Ralstonia pickettii 12J]
          Length = 212

 Score =  127 bits (318), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 63/93 (67%), Positives = 71/93 (76%)

Query: 1   MHAVGFEIAIETNGTIEVPQGVDWICVSPKMGSELKVKRGSELKVVVPQPGQPLDEYEKL 60
           +HA GFEIAIETNGTI VP+G+DW+CVSPKMGSEL V RG ELKVV+PQ GQ LD YE+L
Sbjct: 108 LHARGFEIAIETNGTIAVPEGIDWVCVSPKMGSELVVTRGDELKVVIPQDGQDLDAYERL 167

Query: 61  DFQHFLLQPMDGLQAAANSARARARARARARAR 93
           DFQHF LQ MDG  A  N+A A    + R R R
Sbjct: 168 DFQHFFLQAMDGPLARQNTAAAVELCQRRPRWR 200


>gb|AEG69203.1| organic radical activating enzyme protein [Ralstonia solanacearum
           Po82]
          Length = 212

 Score =  126 bits (317), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 60/91 (65%), Positives = 72/91 (79%)

Query: 1   MHAVGFEIAIETNGTIEVPQGVDWICVSPKMGSELKVKRGSELKVVVPQPGQPLDEYEKL 60
           +HA GFEIA+ETNGT+ VP+G+DW+CVSPKMG+EL V RG ELKVV+PQPGQ LD YE+L
Sbjct: 108 LHARGFEIAVETNGTVAVPEGIDWVCVSPKMGAELVVTRGDELKVVIPQPGQDLDAYERL 167

Query: 61  DFQHFLLQPMDGLQAAANSARARARARARAR 91
           DF+HF LQPMDG  A  N+A A    + R R
Sbjct: 168 DFRHFFLQPMDGPLARQNTALAVELCQRRPR 198


>emb|CBJ38699.1| conserved protein of unknown function (Organic radical activating
           enzymes) [Ralstonia solanacearum CMR15]
          Length = 212

 Score =  125 bits (315), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 60/91 (65%), Positives = 71/91 (78%)

Query: 1   MHAVGFEIAIETNGTIEVPQGVDWICVSPKMGSELKVKRGSELKVVVPQPGQPLDEYEKL 60
           +HA GFEIAIETNGT+ VP G+DW+CVSPK+G+EL V RG ELKVV+PQPGQ LD YE+L
Sbjct: 108 LHARGFEIAIETNGTLAVPDGIDWVCVSPKLGAELVVTRGDELKVVIPQPGQDLDAYERL 167

Query: 61  DFQHFLLQPMDGLQAAANSARARARARARAR 91
           DF+HF LQPMDG  A  N+A A    + R R
Sbjct: 168 DFRHFFLQPMDGPLARQNTALAVELCQRRPR 198