BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.4869.p (359 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775878.1| hypothetical protein Hsero_2471 [Herbaspiril... 573 e-161 ref|ZP_02888867.1| conserved hypothetical protein [Burkholderia ... 289 5e-76 ref|YP_002912653.1| hypothetical protein bglu_1g28860 [Burkholde... 289 6e-76 ref|YP_001890642.1| hypothetical protein Bphyt_6983 [Burkholderi... 288 8e-76 ref|YP_372733.1| hypothetical protein Bcep18194_B1976 [Burkholde... 286 3e-75 >ref|YP_003775878.1| hypothetical protein Hsero_2471 [Herbaspirillum seropedicae SmR1] gb|ADJ63970.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1] Length = 324 Score = 573 bits (1478), Expect = e-161, Method: Composition-based stats. Identities = 278/315 (88%), Positives = 296/315 (93%) Query: 45 ATASLDNAITSKVLVLDRDADCYDTIKSFCERHNLVGLKAHEEHVMAVLRSNVDLGGIML 104 +T S ITSKVLV+D+DADCYDTIK+FCERH+LVGLKAHEEH+MAVLRSNVDLGGIML Sbjct: 10 STHSTHGTITSKVLVVDKDADCYDTIKAFCERHHLVGLKAHEEHIMAVLRSNVDLGGIML 69 Query: 105 SESLAGLGEGGPGLARRIREVRPELPIFLRRRREAADVELSERDSELFSAVYRIEHIDAL 164 SE LAGLGEG GLARRIREVRPELPIFLRRRRE+AD L R+SELFSAVYRIE IDAL Sbjct: 70 SERLAGLGEGARGLARRIREVRPELPIFLRRRRESADQPLDTRESELFSAVYRIEEIDAL 129 Query: 165 APAVASSIFSQQYPNALVRGIAEISRMVLESQFPGMQVEIEQPYLVRDRIIFGEVFTLIP 224 APA+ ++IFSQQYPNALVRGIAEISRMVLE+QFPGM VEI+QPYLVRDRIIFGEVFTLIP Sbjct: 130 APALTAAIFSQQYPNALVRGIAEISRMVLENQFPGMSVEIDQPYLVRDRIIFGEVFTLIP 189 Query: 225 LESSWCRGYMMLQAEQKTLQALAPDESGDFRNLNNALGELTNLIWGWFKNRFINQSQPIH 284 LESSWCRGYMMLQAEQKTLQAL + S DFR+LNNALGELTNLIWGWFKNRFINQSQPIH Sbjct: 190 LESSWCRGYMMLQAEQKTLQALTGNASDDFRDLNNALGELTNLIWGWFKNRFINQSQPIH 249 Query: 285 QLSQVPIIINHQHRYISFGSEDAQLCFKYLLRRDDGAPLVLLQRFIFNLSWSPEDFTENQ 344 QLSQVPIIINHQHRYISFGS+DAQLCFKY+LRR+DGAPLVLLQRFIFNLSWSPEDFTENQ Sbjct: 250 QLSQVPIIINHQHRYISFGSDDAQLCFKYVLRREDGAPLVLLQRFIFNLSWSPEDFTENQ 309 Query: 345 TSVEELFESGELELF 359 TSVEELFESGELELF Sbjct: 310 TSVEELFESGELELF 324 >ref|ZP_02888867.1| conserved hypothetical protein [Burkholderia ambifaria IOP40-10] gb|EDT05525.1| conserved hypothetical protein [Burkholderia ambifaria IOP40-10] Length = 319 Score = 289 bits (739), Expect = 5e-76, Method: Composition-based stats. Identities = 152/312 (48%), Positives = 206/312 (66%), Gaps = 7/312 (2%) Query: 55 SKVLVLDRDADCYDTIKSFCERHNLVGLKAHEEHVMAVLRSNVDLGGIMLSESLAGLGEG 114 SKVLVLD TIK FC+ HNLVGL ++ VLRSN+DLG I+L+E G Sbjct: 8 SKVLVLDDSPAHAATIKRFCDEHNLVGLTVRRNRLLKVLRSNIDLGAILLAEDYGGSPAE 67 Query: 115 GPGLARRIREVRPELPIFLRRRREAADVELSERDSELFSAVYRIEHIDALAPAVASSIFS 174 +A +I +RPELPI LRR +A+ L E + + A Y + + LA A+ +F Sbjct: 68 SAIVATQIDALRPELPIILRRASDASRDGLPEALARVACAAYVADDMTPLARAIGEYLFG 127 Query: 175 QQYPNALVRGIAEISRMVLESQFPGMQVEIEQPYLVRDRIIFGEVFTLIPLESSWCRGYM 234 + YPNALVRGI+EI+ L+S FPGM +E + P +VRD+IIFGEVF+LI LES+WCRGYM Sbjct: 128 RDYPNALVRGISEITEARLDSLFPGMTIERDTPCIVRDQIIFGEVFSLIALESAWCRGYM 187 Query: 235 MLQ-AEQKTLQALA----PDESGDFRNLNNALGELTNLIWGWFKNRFINQSQPIHQLS-Q 288 +LQ +EQ L + + DFR++N+ LGELTNL+WG FKNR++ ++ + + Q Sbjct: 188 LLQTSEQPLLDMIGGTRDDGRAPDFRDVNSLLGELTNLVWGTFKNRYLGDAEALARHPVQ 247 Query: 289 VPIIINHQHRYISFGSEDAQLCFKY-LLRRDDGAPLVLLQRFIFNLSWSPEDFTENQTSV 347 VP+++NH+ ++ISFG + QLCFKY + R G + L QRF+F+LSWSPEDF E+ V Sbjct: 248 VPLVVNHKQKFISFGGDCPQLCFKYRMTDRASGRSVQLDQRFVFSLSWSPEDFRESVQDV 307 Query: 348 EELFESGELELF 359 + ESGELELF Sbjct: 308 GPMVESGELELF 319 >ref|YP_002912653.1| hypothetical protein bglu_1g28860 [Burkholderia glumae BGR1] gb|ACR29949.1| Hypothetical protein bglu_1g28860 [Burkholderia glumae BGR1] Length = 320 Score = 289 bits (739), Expect = 6e-76, Method: Composition-based stats. Identities = 151/312 (48%), Positives = 205/312 (65%), Gaps = 7/312 (2%) Query: 55 SKVLVLDRDADCYDTIKSFCERHNLVGLKAHEEHVMAVLRSNVDLGGIMLSESLAGLGEG 114 SKVLVLD A D I+ FC+ HNLVGLKA ++ VLRSN+DLG ++L+ G + Sbjct: 9 SKVLVLDDSATHLDAIRQFCDEHNLVGLKARRNRLLKVLRSNIDLGAVLLAFDYGGSTDE 68 Query: 115 GPGLARRIREVRPELPIFLRRRREAADVELSERDSELFSAVYRIEHIDALAPAVASSIFS 174 +A +I +RPELPI +RR +A L E + A Y + + L AV +FS Sbjct: 69 AAAVAAQIDALRPELPIIVRRPDGSAADGLPEALRRVACASYALPDLAPLRRAVDEYLFS 128 Query: 175 QQYPNALVRGIAEISRMVLESQFPGMQVEIEQPYLVRDRIIFGEVFTLIPLESSWCRGYM 234 YPNALVRGI EI+ L + F GM + E P +VRD+II+GEVF+LI LES+WCRGYM Sbjct: 129 LAYPNALVRGIEEITEARLATIFRGMTIGCETPCIVRDQIIYGEVFSLIALESAWCRGYM 188 Query: 235 MLQAEQKTL----QALAPDESG-DFRNLNNALGELTNLIWGWFKNRFINQSQ-PIHQLSQ 288 M+Q +++ + A+ PDE DFR+LN LGELTNL+WG FK+RF+ SQ P Q Sbjct: 189 MMQTDEQPMLDFVAAMHPDERAPDFRDLNGVLGELTNLVWGAFKDRFLGSSQIPAASSVQ 248 Query: 289 VPIIINHQHRYISFGSEDAQLCFKYLLRRD-DGAPLVLLQRFIFNLSWSPEDFTENQTSV 347 VP+++NH+H+YISFGSE+ QLCFKY + D G + L QRF+F+L WSPE F ++ +V Sbjct: 249 VPLLVNHKHKYISFGSENPQLCFKYRVTDDKSGRTVTLHQRFVFSLQWSPESFDDHAQAV 308 Query: 348 EELFESGELELF 359 ++ ++GEL+ F Sbjct: 309 GDMVDAGELDWF 320 >ref|YP_001890642.1| hypothetical protein Bphyt_6983 [Burkholderia phytofirmans PsJN] gb|ACD21271.1| conserved hypothetical protein [Burkholderia phytofirmans PsJN] Length = 323 Score = 288 bits (738), Expect = 8e-76, Method: Composition-based stats. Identities = 149/320 (46%), Positives = 202/320 (63%), Gaps = 11/320 (3%) Query: 51 NAITSKVLVLDRDADCYDTIKSFCERHNLVGLKAHEEHVMAVLRSNVDLGGIMLSESLAG 110 N SKVLVLD + +K FC+ +NLVG+K + + +VLRSN+DLG ++ +ES AG Sbjct: 4 NKPVSKVLVLDDCPSHKEALKRFCDENNLVGVKVGKNRLQSVLRSNIDLGAVLFAESYAG 63 Query: 111 LGEGGPGLARRIREVRPELPIFLRRRREAADVELSERDSELFSAVYRIEHIDALAPAVAS 170 E +A RI VRPELPI +RR + L E + A Y + L + Sbjct: 64 SPEASAEIAIRINAVRPELPIIMRRDNDPGMDGLPESLRRVVCAAYVAHDMAPLRQVIDD 123 Query: 171 SIFSQQYPNALVRGIAEISRMVLESQFPGMQVEIEQPYLVRDRIIFGEVFTLIPLESSWC 230 IFS YPNALVRGIA++++ +L F + + + PY+VRDRIIFGEVF+LIPLES+WC Sbjct: 124 YIFSLDYPNALVRGIADMTQAILGDVFKDLTITCDTPYIVRDRIIFGEVFSLIPLESAWC 183 Query: 231 RGYMMLQAEQKTL-------QALAPDESG--DFRNLNNALGELTNLIWGWFKNRFINQSQ 281 RGYMM+QAE+ + Q + + G DFR+LN+ LGE+TNLIWG FKNR++ + Sbjct: 184 RGYMMMQAEETPILELLDRYQMIGSERHGEADFRDLNSVLGEVTNLIWGSFKNRYVGDAD 243 Query: 282 P-IHQLSQVPIIINHQHRYISFGSEDAQLCFKYLLRR-DDGAPLVLLQRFIFNLSWSPED 339 QVP+++NH+H+YISFGS + QLCF Y L+ + L QRF+F+LSWSPED Sbjct: 244 AWTRSQVQVPLLVNHKHKYISFGSGNPQLCFTYWLKDPQTNRAIKLHQRFVFSLSWSPED 303 Query: 340 FTENQTSVEELFESGELELF 359 F E V + E+GEL+LF Sbjct: 304 FKEVTDDVGAMVEAGELDLF 323 >ref|YP_372733.1| hypothetical protein Bcep18194_B1976 [Burkholderia sp. 383] gb|ABB12089.1| hypothetical protein Bcep18194_B1976 [Burkholderia sp. 383] Length = 319 Score = 286 bits (733), Expect = 3e-75, Method: Composition-based stats. Identities = 153/319 (47%), Positives = 207/319 (64%), Gaps = 8/319 (2%) Query: 48 SLDNAITSKVLVLDRDADCYDTIKSFCERHNLVGLKAHEEHVMAVLRSNVDLGGIMLSES 107 +LD + SKVLVLD D IK FC+ HNLVGL ++ VLRSN+DLG I+L+E Sbjct: 2 TLDKPV-SKVLVLDDSRAHADAIKRFCDEHNLVGLTVRRNRLLKVLRSNIDLGAILLAED 60 Query: 108 LAGLGEGGPGLARRIREVRPELPIFLRRRREAADVELSERDSELFSAVYRIEHIDALAPA 167 G +A +I +RPELPI LRR A+ L E + + A Y + + L A Sbjct: 61 YGGSPAESAIIATQIDALRPELPIILRRESLASRDGLPEALARVACAAYVADDMTPLKRA 120 Query: 168 VASSIFSQQYPNALVRGIAEISRMVLESQFPGMQVEIEQPYLVRDRIIFGEVFTLIPLES 227 + +F + YPNALVRGI+EI+ ++S FPGM +E E P +VRD+IIFGEVF+LI LES Sbjct: 121 IDEYLFGRDYPNALVRGISEITEARIDSLFPGMTIEHETPCIVRDQIIFGEVFSLIALES 180 Query: 228 SWCRGYMMLQ-AEQKTLQALA----PDESGDFRNLNNALGELTNLIWGWFKNRFINQSQP 282 +WCRGYM+LQ +EQ L L + DFR++N+ LGELTNL+WG FKNR++ ++ Sbjct: 181 AWCRGYMLLQTSEQPLLDMLGGTRDDGRAPDFRDVNSVLGELTNLVWGAFKNRYLGDAEA 240 Query: 283 IHQLS-QVPIIINHQHRYISFGSEDAQLCFKYLLRRD-DGAPLVLLQRFIFNLSWSPEDF 340 + + QVP+++NH+ ++ISFG + QLCFKY + G + L QRF+F+LSWSPEDF Sbjct: 241 LARHPVQVPLVVNHKQKFISFGGDCPQLCFKYRMTDPASGRSVCLDQRFVFSLSWSPEDF 300 Query: 341 TENQTSVEELFESGELELF 359 E+ V + ESGELELF Sbjct: 301 RESVQDVGPMVESGELELF 319