BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.4868.p (202 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775879.1| hypothetical protein Hsero_2472 [Herbaspiril... 271 6e-71 ref|YP_001353296.1| hypothetical protein mma_1606 [Janthinobacte... 191 4e-47 ref|YP_004235497.1| hypothetical protein Acav_3028 [Acidovorax a... 125 3e-27 ref|YP_970475.1| hypothetical protein Aave_2120 [Acidovorax citr... 116 2e-24 ref|YP_003909927.1| hypothetical protein BC1003_4705 [Burkholder... 113 1e-23 >ref|YP_003775879.1| hypothetical protein Hsero_2472 [Herbaspirillum seropedicae SmR1] gb|ADJ63971.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1] Length = 209 Score = 271 bits (692), Expect = 6e-71, Method: Composition-based stats. Identities = 148/209 (70%), Positives = 167/209 (79%), Gaps = 7/209 (3%) Query: 1 MSANDMDELQAVAEIVADE----RISASACDGFDTLLQQALRSSLVPSDASAEISVVEDI 56 MSAN+MDE+QAV A R+SA+A DG D LLQQALRSSLVPS A V++DI Sbjct: 1 MSANEMDEVQAVTAAAAQAVQEERVSAAARDGLDVLLQQALRSSLVPSGCQAAFEVLDDI 60 Query: 57 AALTEKKMVVLTISSYLFRLMVMFHFTPDAATRGHFARLTRVSAGEMGEQALMDAIAECG 116 + + EKKMVVLTISSYLFR++VMFHFT DAATR HFA L V+A EM EQ L+DAIAECG Sbjct: 61 SHVQEKKMVVLTISSYLFRMVVMFHFTADAATRAHFASLHNVAAAEMSEQGLLDAIAECG 120 Query: 117 NLCCGIFNRELGRFFPHLGMSTPNVIDTQCVAYLQKLNCAHVRHFAIDMA---DTPRLHV 173 NLCCGIFNRELGR+FPHLGMSTPNVID QC AYLQKLNCAH+RHFAID+A ++PR HV Sbjct: 121 NLCCGIFNRELGRYFPHLGMSTPNVIDRQCAAYLQKLNCAHIRHFAIDLAELPESPRFHV 180 Query: 174 SLALSTYDRLDFAVAPGEEADTTGELELF 202 SL +S Y LDFAVA E+ DTTGELELF Sbjct: 181 SLCVSAYAPLDFAVAAEEQVDTTGELELF 209 >ref|YP_001353296.1| hypothetical protein mma_1606 [Janthinobacterium sp. Marseille] gb|ABR91287.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length = 183 Score = 191 bits (486), Expect = 4e-47, Method: Composition-based stats. Identities = 95/182 (52%), Positives = 130/182 (71%) Query: 21 ISASACDGFDTLLQQALRSSLVPSDASAEISVVEDIAALTEKKMVVLTISSYLFRLMVMF 80 IS A +GFD LL ++L++SL + ++EI + +++ L E++ VVLT+SSYLFRLMVM Sbjct: 2 ISPHAQEGFDLLLIRSLKASLPTAMENSEIGITTEVSELVEQEAVVLTVSSYLFRLMVMI 61 Query: 81 HFTPDAATRGHFARLTRVSAGEMGEQALMDAIAECGNLCCGIFNRELGRFFPHLGMSTPN 140 HF DA T + A + V+A + QA DAIAE GNL CGI NRELG +FPH+GMSTPN Sbjct: 62 HFKQDAQTMAYMAGMHEVAAEDNDRQAFHDAIAEYGNLFCGILNRELGSYFPHIGMSTPN 121 Query: 141 VIDTQCVAYLQKLNCAHVRHFAIDMADTPRLHVSLALSTYDRLDFAVAPGEEADTTGELE 200 +D QC++Y++ LNC+H++HFA+ + P HVSL +S YD +DF VA E + +TGELE Sbjct: 122 FLDGQCMSYIEMLNCSHIQHFAVSVEGAPLFHVSLCVSAYDDIDFEVAEDEASASTGELE 181 Query: 201 LF 202 LF Sbjct: 182 LF 183 >ref|YP_004235497.1| hypothetical protein Acav_3028 [Acidovorax avenae subsp. avenae ATCC 19860] gb|ADX46930.1| hypothetical protein Acav_3028 [Acidovorax avenae subsp. avenae ATCC 19860] Length = 196 Score = 125 bits (315), Expect = 3e-27, Method: Composition-based stats. Identities = 74/183 (40%), Positives = 101/183 (55%), Gaps = 2/183 (1%) Query: 21 ISASACDGFDTLLQQALRSSLVPSDASAEISVVEDIAALTEKKMVVLTISSYLFRLMVMF 80 IS A D ++ ALR S+V SDA A + ++ + A M VL+I+S+ FR++ Sbjct: 15 ISPRAQGSLDRMMVSALRQSVVRSDAVA-VQPMDALPATGATHMAVLSIASFSFRVVAAL 73 Query: 81 HFTPDAATRGHFARLTRVSAGEMGEQALMDAIAECGNLCCGIFNRELGRFFPHLGMSTPN 140 HF A RG A ++ AG +QA +D + E GNLC G NR+LG F LG+STP Sbjct: 74 HFDHSPAWRGWVAEMSGQEAGPSSDQAFLDRVCEMGNLCSGAINRDLGGFQAFLGLSTPQ 133 Query: 141 VIDTQCVAYLQKLNCAHVRHFAIDMADTPRLHVSLALSTYDRLDFAVA-PGEEADTTGEL 199 ++D +C Y + HVRHF +D+ LH SL Y LDF A P EA +GEL Sbjct: 134 ILDARCAPYFTRAGFEHVRHFRMDVRPDLSLHASLCARAYAPLDFHWAGPEPEAVESGEL 193 Query: 200 ELF 202 E+F Sbjct: 194 EMF 196 >ref|YP_970475.1| hypothetical protein Aave_2120 [Acidovorax citrulli AAC00-1] gb|ABM32701.1| conserved hypothetical protein [Acidovorax citrulli AAC00-1] Length = 192 Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats. Identities = 73/187 (39%), Positives = 99/187 (52%), Gaps = 15/187 (8%) Query: 25 ACDGFDTLLQQALRSSLVPSDASAEISVVEDIAALTEKK----MVVLTISSYLFRLMVMF 80 A D D ++ AL+ S+ A V+ + AL ++ M VL+I+S+ FR++ Sbjct: 12 ARDSLDRMMVSALQQSVARGSGVA----VQPVDALPDRDGPTHMAVLSIASFSFRVVAAL 67 Query: 81 HFTPDAATRGHFARLTRVSAGEMGEQALMDAIAECGNLCCGIFNRELGRFFPHLGMSTPN 140 HF A R A+ + A MG+QA +D I E GNLCCG NR+LG F LG+STP Sbjct: 68 HFAHGPAWRAWVAQTAGLDAAGMGDQAFLDRICEMGNLCCGAINRDLGAFQAFLGLSTPQ 127 Query: 141 VIDTQCVAYLQKLNCAHVRHFAIDMADTPRLHVSLALSTYDRLDF-----AVAPGEEADT 195 ++D +C Y + HVRHF +D+ LH SL Y DF A AP EA Sbjct: 128 ILDARCAPYFTRAGFEHVRHFRMDVRPDLALHASLCARAYVPQDFHWTGGAAAP--EAVA 185 Query: 196 TGELELF 202 +GELELF Sbjct: 186 SGELELF 192 >ref|YP_003909927.1| hypothetical protein BC1003_4705 [Burkholderia sp. CCGE1003] gb|ADN60636.1| hypothetical protein BC1003_4705 [Burkholderia sp. CCGE1003] Length = 180 Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats. Identities = 69/186 (37%), Positives = 106/186 (56%), Gaps = 11/186 (5%) Query: 21 ISASACDGFDTLLQQALRSSLVPSDASAEISVV----EDIAALTEKKMVVLTISSYLFRL 76 ISA A D F+ + ++A ++ L PSD +V D A ++VVLTISS +FR+ Sbjct: 2 ISAHAKDSFERIFRKAAQARL-PSDPDDSCEIVPASQADEATAPGSQVVVLTISSIVFRV 60 Query: 77 MVMFHFTPDAATRGHFARLTRVSAGEMGEQALMDAIAECGNLCCGIFNRELGRFFPHLGM 136 +++ HF D +TR ++ R E E+ +A E NLCCG N+EL R+FP LGM Sbjct: 61 LLILHFDEDDSTRRYYLR------DEADERPFQEAFLEICNLCCGAINQELLRYFPDLGM 114 Query: 137 STPNVIDTQCVAYLQKLNCAHVRHFAIDMADTPRLHVSLALSTYDRLDFAVAPGEEADTT 196 STP V+ +C+ +L++L A + +++ + T RL +L + Y +DF +T+ Sbjct: 115 STPYVLSARCLPHLRELKPALLSSYSVMLGGTARLGATLCVCAYAPVDFIADTSAVEETS 174 Query: 197 GELELF 202 GELELF Sbjct: 175 GELELF 180