BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.4865.p (261 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775882.1| short-chain dehydrogenase/reductase family p... 427 e-118 ref|YP_004234077.1| 3-oxoacyl-(acyl-carrier-protein) reductase [... 317 1e-84 ref|YP_969914.1| short-chain dehydrogenase/reductase SDR [Acidov... 317 2e-84 ref|YP_004153023.1| short-chain dehydrogenase/reductase sdr [Var... 297 9e-79 ref|ZP_01000335.1| Short-chain dehydrogenase/reductase SDR [Ocea... 288 6e-76 >ref|YP_003775882.1| short-chain dehydrogenase/reductase family protein [Herbaspirillum seropedicae SmR1] gb|ADJ63974.1| short-chain dehydrogenase/reductase family protein [Herbaspirillum seropedicae SmR1] Length = 261 Score = 427 bits (1098), Expect = e-118, Method: Composition-based stats. Identities = 218/261 (83%), Positives = 242/261 (92%) Query: 1 MPSLNPSQLQRFKDKVVIVTGAASGIGEATARRFSDEGAKVLLADRNAAALTKVFDSLPA 60 M +LNPS+LQRF+ KVVIVTGAASGIGEATARRFSDEGA+VLLADR+AAAL KVFDSLP Sbjct: 1 MSALNPSRLQRFEGKVVIVTGAASGIGEATARRFSDEGARVLLADRDAAALGKVFDSLPP 60 Query: 61 ERSAARETDVSHHEDVRQMVEFAIERFGRIDVLVSDAGIFAEGDITQVSPEDWHHVQATN 120 ER+AARETDVSHHE VRQ+V+FAIERFG++DVLVSDAG+FAEG++T+VSPEDWH VQATN Sbjct: 61 ERTAARETDVSHHEQVRQLVDFAIERFGQLDVLVSDAGVFAEGNVTEVSPEDWHRVQATN 120 Query: 121 VNGVFYGAREAMPHLEKTRGCIVNVASVSGLGADWNLAAYNTSKGAVVNLTRAMALDFGR 180 VNGVFYGAREA+PHLEKTRGCIVNVASVSGL ADWNL+AYN SKGAV NLTRAMALDFGR Sbjct: 121 VNGVFYGAREALPHLEKTRGCIVNVASVSGLAADWNLSAYNASKGAVCNLTRAMALDFGR 180 Query: 181 KGIRVNAVCPSLTYTGMTADVAEDQEQLAKFAERIPLGRGADPVEIASVIAFLASPDAGF 240 KG+R+NAVCPSLT+T MTAD+A+D L KFAERI LGRGADP+EIA+VI FLASPDA F Sbjct: 181 KGVRINAVCPSLTHTAMTADMADDPPLLDKFAERIALGRGADPLEIAAVITFLASPDASF 240 Query: 241 VTGVNLPVDGGVTASNGQPPQ 261 V GVNLPVDGG+ ASNGQPPQ Sbjct: 241 VNGVNLPVDGGLMASNGQPPQ 261 >ref|YP_004234077.1| 3-oxoacyl-(acyl-carrier-protein) reductase [Acidovorax avenae subsp. avenae ATCC 19860] gb|ADX45510.1| 3-oxoacyl-(acyl-carrier-protein) reductase [Acidovorax avenae subsp. avenae ATCC 19860] Length = 267 Score = 317 bits (811), Expect = 1e-84, Method: Composition-based stats. Identities = 174/259 (67%), Positives = 203/259 (78%), Gaps = 2/259 (0%) Query: 3 SLNPSQLQRFKDKVVIVTGAASGIGEATARRFSDEGAKVLLADRNAAALTKVFDSLPAER 62 S +PS+ RF KVVIVTGA SGIG ATARRFS EGA V +AD + L LPA+R Sbjct: 10 SADPSR--RFAGKVVIVTGAGSGIGAATARRFSQEGAMVAIADLSDDKLAATRADLPADR 67 Query: 63 SAARETDVSHHEDVRQMVEFAIERFGRIDVLVSDAGIFAEGDITQVSPEDWHHVQATNVN 122 + A DVS EDV+ +V +ERFG +DV+V++AGI +G +T+ S EDW V ATNV+ Sbjct: 68 TLAHPADVSKFEDVQALVAATVERFGHLDVMVNNAGIAVQGKVTEASLEDWQRVLATNVS 127 Query: 123 GVFYGAREAMPHLEKTRGCIVNVASVSGLGADWNLAAYNTSKGAVVNLTRAMALDFGRKG 182 GVF+GAR AMPHL KTRGCIVN +SVSGLG DW+++ YNTSKGAV N TRA+ALD G+ G Sbjct: 128 GVFHGARVAMPHLLKTRGCIVNTSSVSGLGGDWDMSFYNTSKGAVSNFTRALALDHGKDG 187 Query: 183 IRVNAVCPSLTYTGMTADVAEDQEQLAKFAERIPLGRGADPVEIASVIAFLASPDAGFVT 242 +RVNAV PSLT+TGMT D+ D E LAKFAERIPLGRGA+P EIASVIAFLASPDAGFVT Sbjct: 188 VRVNAVAPSLTFTGMTEDIKSDPELLAKFAERIPLGRGAEPEEIASVIAFLASPDAGFVT 247 Query: 243 GVNLPVDGGVTASNGQPPQ 261 GV LPVDGGV+ASNGQPPQ Sbjct: 248 GVVLPVDGGVSASNGQPPQ 266 >ref|YP_969914.1| short-chain dehydrogenase/reductase SDR [Acidovorax citrulli AAC00-1] gb|ABM32140.1| short-chain dehydrogenase/reductase SDR [Acidovorax citrulli AAC00-1] Length = 270 Score = 317 bits (811), Expect = 2e-84, Method: Composition-based stats. Identities = 169/252 (67%), Positives = 200/252 (79%) Query: 10 QRFKDKVVIVTGAASGIGEATARRFSDEGAKVLLADRNAAALTKVFDSLPAERSAARETD 69 +RF KVVIVTGA SGIG ATARRFS EGA V +AD + L LPA+R+ A D Sbjct: 18 RRFAGKVVIVTGAGSGIGAATARRFSQEGAMVAIADLSDDKLAATRADLPADRTLAHPAD 77 Query: 70 VSHHEDVRQMVEFAIERFGRIDVLVSDAGIFAEGDITQVSPEDWHHVQATNVNGVFYGAR 129 VS EDV+ +V+ ++RFG +DV+V++AGI +G +T+ S +DW V ATNV+GVF+GAR Sbjct: 78 VSKFEDVQALVDATVQRFGHLDVMVNNAGIAVQGKVTEASLDDWQRVLATNVSGVFHGAR 137 Query: 130 EAMPHLEKTRGCIVNVASVSGLGADWNLAAYNTSKGAVVNLTRAMALDFGRKGIRVNAVC 189 AMPHL KTRGCIVN +SVSGLG DW+++ YNTSKGAV N TRA+ALD G+ G+RVNAV Sbjct: 138 AAMPHLLKTRGCIVNTSSVSGLGGDWDMSFYNTSKGAVSNFTRALALDHGKDGVRVNAVA 197 Query: 190 PSLTYTGMTADVAEDQEQLAKFAERIPLGRGADPVEIASVIAFLASPDAGFVTGVNLPVD 249 PSLT+TGMT D+ D E LAKFAERIPLGRGA+P EIASVIAFLASPDAGFVTGV LPVD Sbjct: 198 PSLTFTGMTEDIKGDPELLAKFAERIPLGRGAEPEEIASVIAFLASPDAGFVTGVVLPVD 257 Query: 250 GGVTASNGQPPQ 261 GGV+ASNGQPPQ Sbjct: 258 GGVSASNGQPPQ 269 >ref|YP_004153023.1| short-chain dehydrogenase/reductase sdr [Variovorax paradoxus EPS] gb|ADU34912.1| short-chain dehydrogenase/reductase SDR [Variovorax paradoxus EPS] Length = 254 Score = 297 bits (761), Expect = 9e-79, Method: Composition-based stats. Identities = 153/251 (60%), Positives = 189/251 (75%) Query: 9 LQRFKDKVVIVTGAASGIGEATARRFSDEGAKVLLADRNAAALTKVFDSLPAERSAARET 68 +QRF DKVVIVTGA SGIGEATARRFS EGA V+LA A L +V LP ER+ + T Sbjct: 1 MQRFTDKVVIVTGAGSGIGEATARRFSQEGANVVLAGNTKAKLDRVARDLPPERTLVKVT 60 Query: 69 DVSHHEDVRQMVEFAIERFGRIDVLVSDAGIFAEGDITQVSPEDWHHVQATNVNGVFYGA 128 DVS+++ V+ +V ++RFG + VL ++AGI EG +T+ + W + ATNV GVF+G Sbjct: 61 DVSNYKQVQALVAATLKRFGALHVLFNNAGIAVEGTVTEAPFDGWDKIMATNVGGVFHGC 120 Query: 129 REAMPHLEKTRGCIVNVASVSGLGADWNLAAYNTSKGAVVNLTRAMALDFGRKGIRVNAV 188 R AMPHL +++GCIVN SVSGLG DW + YN SKGA+VN T+A+ALD GR G+RVNAV Sbjct: 121 RAAMPHLIESKGCIVNTGSVSGLGGDWGMGFYNASKGAIVNFTKALALDHGRDGVRVNAV 180 Query: 189 CPSLTYTGMTADVAEDQEQLAKFAERIPLGRGADPVEIASVIAFLASPDAGFVTGVNLPV 248 CPSLT+T MT D+ D++ +AKF ERIPLGRGA P EIA+V+AFLAS DA FV GV LPV Sbjct: 181 CPSLTFTPMTEDMKGDRKLMAKFNERIPLGRGAQPEEIAAVVAFLASDDASFVNGVALPV 240 Query: 249 DGGVTASNGQP 259 DGG+ ASNGQP Sbjct: 241 DGGLMASNGQP 251 >ref|ZP_01000335.1| Short-chain dehydrogenase/reductase SDR [Oceanicola batsensis HTCC2597] gb|EAQ02266.1| Short-chain dehydrogenase/reductase SDR [Oceanicola batsensis HTCC2597] Length = 271 Score = 288 bits (737), Expect = 6e-76, Method: Composition-based stats. Identities = 156/268 (58%), Positives = 196/268 (73%), Gaps = 13/268 (4%) Query: 2 PSLNPSQ----LQRFKDKVVIVTGAASGIGEATARRFSDEGAKVLLADRNAAALTKVFDS 57 P L+P + + RF++K VIVTGAASG+G ATARRF +EGA+V AD L + Sbjct: 8 PGLHPDKQETGMNRFENKTVIVTGAASGMGRATARRFLEEGARVACAD-----LPDQLEQ 62 Query: 58 LPAE---RSAAR-ETDVSHHEDVRQMVEFAIERFGRIDVLVSDAGIFAEGDITQVSPEDW 113 LP + SA R TDVS + V +V+ +E FG +DV+V++AG G+I +V+ EDW Sbjct: 63 LPGDLECDSALRCPTDVSDSDQVDALVDRTVETFGGLDVIVNNAGQLIGGEIGEVTNEDW 122 Query: 114 HHVQATNVNGVFYGAREAMPHLEKTRGCIVNVASVSGLGADWNLAAYNTSKGAVVNLTRA 173 H V AT+V+GVFYG R A+PHLE++ GC+VN SVSGLG DW ++ YN +KGA LTRA Sbjct: 123 HKVFATDVDGVFYGCRAALPHLERSGGCVVNTVSVSGLGGDWGMSPYNAAKGAAAQLTRA 182 Query: 174 MALDFGRKGIRVNAVCPSLTYTGMTADVAEDQEQLAKFAERIPLGRGADPVEIASVIAFL 233 +ALDFGRKG+RVNAVCP+LT TGMT DV D+E + KF ERI LGR A+P ++A+VIAFL Sbjct: 183 LALDFGRKGVRVNAVCPTLTRTGMTTDVVADEEMVEKFRERIALGRYAEPEDVAAVIAFL 242 Query: 234 ASPDAGFVTGVNLPVDGGVTASNGQPPQ 261 AS DA FVTGVNLPVDGG+ ASNGQPPQ Sbjct: 243 ASDDARFVTGVNLPVDGGLMASNGQPPQ 270