BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.4862.p (267 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775884.1| metal-dependent hydrolase [Herbaspirillum se... 394 e-108 ref|YP_003609003.1| endonuclease/exonuclease/phosphatase [Burkho... 306 3e-81 ref|YP_001861534.1| endonuclease/exonuclease/phosphatase [Burkho... 283 1e-74 ref|YP_001816299.1| endonuclease/exonuclease/phosphatase [Burkho... 265 6e-69 ref|YP_001115001.1| endonuclease/exonuclease/phosphatase [Burkho... 264 8e-69 >ref|YP_003775884.1| metal-dependent hydrolase [Herbaspirillum seropedicae SmR1] gb|ADJ63976.1| metal-dependent hydrolase protein [Herbaspirillum seropedicae SmR1] Length = 260 Score = 394 bits (1012), Expect = e-108, Method: Composition-based stats. Identities = 205/267 (76%), Positives = 226/267 (84%), Gaps = 7/267 (2%) Query: 1 MRSGSLSHRAAEHQPASTAEARSDTELVLTGDVPLRDLDPWPLTVATYNIHGAIGTDGVF 60 MRS LS R TA A +DTELVL+ D P+ DPWPLTVATYNIHGA+GTDG F Sbjct: 1 MRSARLSER-------QTAPAPADTELVLSADAPVPGRDPWPLTVATYNIHGAVGTDGRF 53 Query: 61 SPQRIAQVLKEINADVVALQEVPLGGSSQPDVLSLLRKETGFFAVEGPTMESAERRYGNA 120 +P+R+A VL E+ ADVVALQEVPLGG+ Q DVL+LLR TG FA EGPTMES RRYGNA Sbjct: 54 APERVAAVLDELQADVVALQEVPLGGADQVDVLALLRAHTGMFAAEGPTMESPARRYGNA 113 Query: 121 VLSRYPILAKQSIDLSFGSREPRGALDADIDCHGHMLRVIATHLGLKPAERRAQIKRLLQ 180 VLSRYPILA +SIDLSFGSREPRGALDADIDC G +LRV+ATHLGLKPAERRAQIKRLLQ Sbjct: 114 VLSRYPILATESIDLSFGSREPRGALDADIDCRGQLLRVVATHLGLKPAERRAQIKRLLQ 173 Query: 181 AFDTDQAPVILMGDVNEWFMWGRALRWLVSHFEAAPAPRTFPSRWPLFALDRIWISPRQR 240 AFDT+ APVIL+GDVNEWFMWGR LRWLV HFEAAPAP TFPSRWP+FALDRIWISPR+R Sbjct: 174 AFDTNDAPVILLGDVNEWFMWGRTLRWLVGHFEAAPAPPTFPSRWPVFALDRIWISPRRR 233 Query: 241 LLQVQVHRTALSRVASDHLPLVAHIDG 267 L + VHR+AL+RVASDHLPL+AHI G Sbjct: 234 LQHLAVHRSALARVASDHLPLLAHIAG 260 >ref|YP_003609003.1| endonuclease/exonuclease/phosphatase [Burkholderia sp. CCGE1002] gb|ADG19492.1| Endonuclease/exonuclease/phosphatase [Burkholderia sp. CCGE1002] Length = 250 Score = 306 bits (783), Expect = 3e-81, Method: Composition-based stats. Identities = 148/223 (66%), Positives = 186/223 (83%) Query: 43 LTVATYNIHGAIGTDGVFSPQRIAQVLKEINADVVALQEVPLGGSSQPDVLSLLRKETGF 102 L + TYN+HGA+G DG F+P+RI VL EI+AD+ ALQEVPLGG+S PDVL+LL++ TG Sbjct: 22 LRIGTYNLHGAVGIDGKFAPKRIGDVLTEIDADIFALQEVPLGGASSPDVLALLQRMTGL 81 Query: 103 FAVEGPTMESAERRYGNAVLSRYPILAKQSIDLSFGSREPRGALDADIDCHGHMLRVIAT 162 AV GPT ++ RR+GNAVL+RYP+ A +++DLSF SREPRGALDADIDC+G + RV+AT Sbjct: 82 DAVAGPTFDTPARRFGNAVLTRYPVRAVRTLDLSFKSREPRGALDADIDCNGELWRVVAT 141 Query: 163 HLGLKPAERRAQIKRLLQAFDTDQAPVILMGDVNEWFMWGRALRWLVSHFEAAPAPRTFP 222 HLGL +ERRAQ++++LQ FDT PVIL+GD+NEWF++GR LR LV+HF A A RTFP Sbjct: 142 HLGLASSERRAQVEQVLQRFDTPALPVILLGDLNEWFVYGRTLRRLVTHFRRATALRTFP 201 Query: 223 SRWPLFALDRIWISPRQRLLQVQVHRTALSRVASDHLPLVAHI 265 +R+PLFALDRIW+ P +RLL+V VHRTALSRVASDH PL+AHI Sbjct: 202 TRFPLFALDRIWVHPGERLLRVDVHRTALSRVASDHYPLIAHI 244 >ref|YP_001861534.1| endonuclease/exonuclease/phosphatase [Burkholderia phymatum STM815] gb|ACC74488.1| Endonuclease/exonuclease/phosphatase [Burkholderia phymatum STM815] Length = 250 Score = 283 bits (725), Expect = 1e-74, Method: Composition-based stats. Identities = 145/225 (64%), Positives = 179/225 (79%), Gaps = 2/225 (0%) Query: 43 LTVATYNIHGAIGTDGVFSPQRIAQVLKEINADVVALQEVPLGGSSQPDVLSLLRKETGF 102 L +AT+NIHG +GTD SP+RI +V++E++AD+VALQEVPLGGS P L +LR+ TG Sbjct: 21 LRIATWNIHGTVGTDRFASPERIGRVIRELDADIVALQEVPLGGSFAPSALPVLREMTGM 80 Query: 103 FAVEGPTMESAERRYGNAVLSRYPILAKQSIDLSFGSREPRGALDADI--DCHGHMLRVI 160 A+ GPT+++ ERRYGNA+LSR PI A +++DLSFG+RE RGALD D+ D G LRV+ Sbjct: 81 DAIAGPTLDTPERRYGNAILSRLPICATRALDLSFGTREARGALDVDVETDGPGTALRVV 140 Query: 161 ATHLGLKPAERRAQIKRLLQAFDTDQAPVILMGDVNEWFMWGRALRWLVSHFEAAPAPRT 220 ATHLGL ERRAQI+ L+ AFDT + PV+LMGD+NEWF+WG ALR LV+HF AAPAPRT Sbjct: 141 ATHLGLSARERRAQIRALIAAFDTARMPVLLMGDINEWFVWGPALRMLVTHFRAAPAPRT 200 Query: 221 FPSRWPLFALDRIWISPRQRLLQVQVHRTALSRVASDHLPLVAHI 265 FPSR P+FALDRIW+ P RLL V VH + L+RVASDHLPLVA I Sbjct: 201 FPSRLPVFALDRIWMHPVDRLLDVHVHSSMLARVASDHLPLVARI 245 >ref|YP_001816299.1| endonuclease/exonuclease/phosphatase [Burkholderia ambifaria MC40-6] gb|ACB68746.1| Endonuclease/exonuclease/phosphatase [Burkholderia ambifaria MC40-6] Length = 269 Score = 265 bits (676), Expect = 6e-69, Method: Composition-based stats. Identities = 139/223 (62%), Positives = 171/223 (76%) Query: 43 LTVATYNIHGAIGTDGVFSPQRIAQVLKEINADVVALQEVPLGGSSQPDVLSLLRKETGF 102 L +ATYNI G G + RIAQV+ E++ADV+ALQEVPLGG+ PDVL+ LR TG Sbjct: 29 LRIATYNIRGGYGKWHTRAAHRIAQVIHELDADVIALQEVPLGGTHAPDVLAHLRDATGM 88 Query: 103 FAVEGPTMESAERRYGNAVLSRYPILAKQSIDLSFGSREPRGALDADIDCHGHMLRVIAT 162 AV GPT+++ ERRYGNAVLSR PI A +++DLSF REPRGALDADIDC M+RV+AT Sbjct: 89 HAVAGPTIDTPERRYGNAVLSRCPIRAARTLDLSFHQREPRGALDADIDCSAGMIRVVAT 148 Query: 163 HLGLKPAERRAQIKRLLQAFDTDQAPVILMGDVNEWFMWGRALRWLVSHFEAAPAPRTFP 222 HLGL +ER AQ++RLL AFDT PVILMGD+NEWF+ GRAL+ LV+ F APAPRTFP Sbjct: 149 HLGLSASERSAQVQRLLAAFDTGAMPVILMGDINEWFVRGRALQALVTRFRRAPAPRTFP 208 Query: 223 SRWPLFALDRIWISPRQRLLQVQVHRTALSRVASDHLPLVAHI 265 + +P+F+LDRIWI P + L+ V VHR+ +R ASDH PLVA + Sbjct: 209 TLYPVFSLDRIWIHPGEWLVDVNVHRSMRARRASDHYPLVARM 251 >ref|YP_001115001.1| endonuclease/exonuclease/phosphatase [Burkholderia vietnamiensis G4] gb|ABO58746.1| Endonuclease/exonuclease/phosphatase [Burkholderia vietnamiensis G4] Length = 263 Score = 264 bits (675), Expect = 8e-69, Method: Composition-based stats. Identities = 137/223 (61%), Positives = 169/223 (75%) Query: 43 LTVATYNIHGAIGTDGVFSPQRIAQVLKEINADVVALQEVPLGGSSQPDVLSLLRKETGF 102 L +ATYNIHG G + +RI V++E++ADV+ALQEVPLGG+ PDVL+ LR TG Sbjct: 29 LRIATYNIHGGYGAWPARAVERIVAVIRELDADVIALQEVPLGGTRAPDVLAHLRDATGM 88 Query: 103 FAVEGPTMESAERRYGNAVLSRYPILAKQSIDLSFGSREPRGALDADIDCHGHMLRVIAT 162 A GPT+++ ERRYGNAVLSR PI A +++DLSF REPRGALDADIDC +RV+AT Sbjct: 89 HAAAGPTIDTPERRYGNAVLSRCPIRAARTLDLSFHQREPRGALDADIDCSAGPIRVVAT 148 Query: 163 HLGLKPAERRAQIKRLLQAFDTDQAPVILMGDVNEWFMWGRALRWLVSHFEAAPAPRTFP 222 HLGL ER AQ++RLL AFDT PVILMGD+NEWF+ GRAL+ L + F APAPRTFP Sbjct: 149 HLGLSANERSAQVQRLLAAFDTGAMPVILMGDINEWFVRGRALQALTTRFRRAPAPRTFP 208 Query: 223 SRWPLFALDRIWISPRQRLLQVQVHRTALSRVASDHLPLVAHI 265 + WP+F+LDRIWI P + L+ V VHR+ L+R ASDH PLVA + Sbjct: 209 TAWPVFSLDRIWIHPGELLVDVAVHRSMLARHASDHYPLVAQM 251