BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.4859.p (230 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775887.1| signal peptidase I (SPase I) family protein ... 358 5e-97 ref|YP_002909486.1| Signal peptidase I [Burkholderia glumae BGR1... 275 4e-72 ref|YP_558515.1| signal peptidase I [Burkholderia xenovorans LB4... 273 2e-71 ref|YP_001857893.1| signal peptidase I [Burkholderia phymatum ST... 271 4e-71 ref|ZP_02466335.1| Signal peptidase I [Burkholderia thailandensi... 271 4e-71 >ref|YP_003775887.1| signal peptidase I (SPase I) family protein [Herbaspirillum seropedicae SmR1] emb|CAM32656.1| Signal peptidase I family protein [Herbaspirillum seropedicae] gb|ADJ63979.1| signal peptidase I (SPase I) family protein [Herbaspirillum seropedicae SmR1] Length = 231 Score = 358 bits (918), Expect = 5e-97, Method: Composition-based stats. Identities = 186/225 (82%), Positives = 200/225 (88%) Query: 1 MSFPLKQLAAANKGLLAFIALMVVFRSAIADYNVVPSGSMLPTVMVGDRILVDKLAYDLR 60 M L +L A NKGLLAFIALMV+FRSAIADYNVVPSGSMLPTV +GDRILVDK+AYDLR Sbjct: 1 MKSTLNKLLADNKGLLAFIALMVMFRSAIADYNVVPSGSMLPTVQIGDRILVDKMAYDLR 60 Query: 61 LPLTHISLLRLGEPQRGDIVTIDSRQAGELLLKRIIGLPGDVVELRDNVLFINGQPASYG 120 LPLTHISLLRLGEPQRGDIVTIDSRQAGELL+KRI+GLPGDVVELRDNVLFINGQPA Y Sbjct: 61 LPLTHISLLRLGEPQRGDIVTIDSRQAGELLVKRIVGLPGDVVELRDNVLFINGQPAHYH 120 Query: 121 PAHARPESGDGVDQARYRDERLDGMNHLVRLSEAHPSLHSSFGPVVVPADHYMMLGDNRD 180 PA PE+GDG DQA YRDER M H VRLS AHPSLHSS+GPVVVP HYMMLGDNRD Sbjct: 121 PAAEAPEAGDGSDQAAYRDERYGAMEHAVRLSAAHPSLHSSYGPVVVPPGHYMMLGDNRD 180 Query: 181 NSMDSRYFGFFARSELMGRTRRIAFSLDADQYFKPRLDRFGRRLD 225 NSMDSRYFGFFAR ELMGRTRRIAFSLDA++ ++PRL+RFG+ LD Sbjct: 181 NSMDSRYFGFFARDELMGRTRRIAFSLDAERGYRPRLERFGQLLD 225 >ref|YP_002909486.1| Signal peptidase I [Burkholderia glumae BGR1] gb|ACR32251.1| Signal peptidase I [Burkholderia glumae BGR1] Length = 228 Score = 275 bits (703), Expect = 4e-72, Method: Composition-based stats. Identities = 147/219 (67%), Positives = 165/219 (75%) Query: 7 QLAAANKGLLAFIALMVVFRSAIADYNVVPSGSMLPTVMVGDRILVDKLAYDLRLPLTHI 66 +L ANKG LAF+ LMV+FRSAIAD+NVVPSGSMLPT+ +GDRILVDK+AYDLR+P THI Sbjct: 6 RLWKANKGFLAFLFLMVIFRSAIADWNVVPSGSMLPTIRIGDRILVDKMAYDLRVPFTHI 65 Query: 67 SLLRLGEPQRGDIVTIDSRQAGELLLKRIIGLPGDVVELRDNVLFINGQPASYGPAHARP 126 L RL EPQRGDIVTIDS A ELL+KR+IGLPGD VELR+NVL ING A+Y P Sbjct: 66 RLARLHEPQRGDIVTIDSAAAHELLVKRLIGLPGDTVELRNNVLLINGVRAAYRPVGTNL 125 Query: 127 ESGDGVDQARYRDERLDGMNHLVRLSEAHPSLHSSFGPVVVPADHYMMLGDNRDNSMDSR 186 D Y ER+DG +VRLS PS SFGPVVVP Y+MLGDNRDNS DSR Sbjct: 126 LRSDAASPGEYLAERIDGSARIVRLSPDAPSPRDSFGPVVVPKGQYLMLGDNRDNSADSR 185 Query: 187 YFGFFARSELMGRTRRIAFSLDADQYFKPRLDRFGRRLD 225 YFGFF R E+MGR RR+AFSLD + PRLDRFGRRLD Sbjct: 186 YFGFFPRDEIMGRARRVAFSLDPSHDYLPRLDRFGRRLD 224 >ref|YP_558515.1| signal peptidase I [Burkholderia xenovorans LB400] gb|ABE30463.1| signal peptidase I, Serine peptidase, MEROPS family S26A [Burkholderia xenovorans LB400] Length = 233 Score = 273 bits (697), Expect = 2e-71, Method: Composition-based stats. Identities = 138/221 (62%), Positives = 169/221 (76%) Query: 5 LKQLAAANKGLLAFIALMVVFRSAIADYNVVPSGSMLPTVMVGDRILVDKLAYDLRLPLT 64 L +L NK L+AF+ LMV+FRSA+AD+NVVPSGSMLPT+ GDRI VDK+AYDLR+PLT Sbjct: 4 LGKLWRDNKSLVAFLFLMVLFRSAVADWNVVPSGSMLPTIREGDRIFVDKMAYDLRVPLT 63 Query: 65 HISLLRLGEPQRGDIVTIDSRQAGELLLKRIIGLPGDVVELRDNVLFINGQPASYGPAHA 124 HI++ L +PQRGDIVTIDS A EL++KR+IGLPGD V +R+NVL++NG A Y P Sbjct: 64 HIAIAHLHDPQRGDIVTIDSSAAHELIVKRLIGLPGDSVAMRENVLYVNGVRADYQPLKF 123 Query: 125 RPESGDGVDQARYRDERLDGMNHLVRLSEAHPSLHSSFGPVVVPADHYMMLGDNRDNSMD 184 +P GD Y ER DG+ H+VRL+ PS SFGPV+VP Y+MLGDNRD+S D Sbjct: 124 KPLPGDASSPGDYLTERFDGIAHIVRLAPQAPSPRDSFGPVIVPPGEYLMLGDNRDDSAD 183 Query: 185 SRYFGFFARSELMGRTRRIAFSLDADQYFKPRLDRFGRRLD 225 SRYFGFF+R ELMGRTRR+A+SLD D Y+ PR +RFG RLD Sbjct: 184 SRYFGFFSRKELMGRTRRVAYSLDPDHYYAPRFERFGARLD 224 >ref|YP_001857893.1| signal peptidase I [Burkholderia phymatum STM815] gb|ACC70847.1| signal peptidase I [Burkholderia phymatum STM815] Length = 234 Score = 271 bits (694), Expect = 4e-71, Method: Composition-based stats. Identities = 147/228 (64%), Positives = 171/228 (75%), Gaps = 4/228 (1%) Query: 5 LKQLAAANKGLLAFIALMVVFRSAIADYNVVPSGSMLPTVMVGDRILVDKLAYDLRLPLT 64 L +L K L FI LMV+FRSAIAD+NVVPSGSMLPT+ GDRILVDK+AYDLR+PLT Sbjct: 5 LARLWREYKSLATFIFLMVLFRSAIADWNVVPSGSMLPTIREGDRILVDKMAYDLRIPLT 64 Query: 65 HISLLRLGEPQRGDIVTIDSRQAGELLLKRIIGLPGDVVELRDNVLFINGQPASYGPAHA 124 HI++ L EPQRGDIVTIDS A EL++KR+IGLPGDVV +RDNVL++NG ASY P Sbjct: 65 HIAIAHLHEPQRGDIVTIDSSAARELIVKRVIGLPGDVVAMRDNVLYVNGARASYQPLAL 124 Query: 125 RPESGDGVDQARYRDERLDGMN----HLVRLSEAHPSLHSSFGPVVVPADHYMMLGDNRD 180 P GD V Y ER+ G + H VRLSE PS SFGPV VPA Y+MLGDNRD Sbjct: 125 APLPGDAVSPGDYLTERVAGASPGSPHAVRLSELAPSPRRSFGPVTVPAGEYLMLGDNRD 184 Query: 181 NSMDSRYFGFFARSELMGRTRRIAFSLDADQYFKPRLDRFGRRLDPVS 228 +S DSRYFGFF R+ELMGRTRR+AFSLD D ++PR +RFG RLD V+ Sbjct: 185 DSADSRYFGFFPRAELMGRTRRVAFSLDPDHAYRPRFERFGVRLDAVA 232 >ref|ZP_02466335.1| Signal peptidase I [Burkholderia thailandensis MSMB43] Length = 228 Score = 271 bits (694), Expect = 4e-71, Method: Composition-based stats. Identities = 137/213 (64%), Positives = 166/213 (77%) Query: 13 KGLLAFIALMVVFRSAIADYNVVPSGSMLPTVMVGDRILVDKLAYDLRLPLTHISLLRLG 72 + L+AF+ MVVFRSA+AD+NVVPSGSMLPT+ +GDRI VDKLAYDLR+P TH+ + LG Sbjct: 12 RKLIAFLFFMVVFRSAVADWNVVPSGSMLPTIRLGDRIFVDKLAYDLRVPFTHVRVAHLG 71 Query: 73 EPQRGDIVTIDSRQAGELLLKRIIGLPGDVVELRDNVLFINGQPASYGPAHARPESGDGV 132 +PQRGDIVT+DS A ELL+KR+IGLPGDVVE+RDNVL+I+G+ Y P A S D Sbjct: 72 DPQRGDIVTVDSSAAHELLVKRVIGLPGDVVEMRDNVLYIDGKRVRYAPLGANLLSSDAT 131 Query: 133 DQARYRDERLDGMNHLVRLSEAHPSLHSSFGPVVVPADHYMMLGDNRDNSMDSRYFGFFA 192 + YR ERL G H+VRLS PS SSFGPVVVP Y+MLGDNRD+S DSRY+GFF Sbjct: 132 ARGEYRAERLAGATHVVRLSPDAPSPRSSFGPVVVPNGAYLMLGDNRDDSADSRYYGFFP 191 Query: 193 RSELMGRTRRIAFSLDADQYFKPRLDRFGRRLD 225 R E+MGRTRR+AFSLD +++ PR+ RFG RLD Sbjct: 192 RDEIMGRTRRVAFSLDPSRFYLPRIGRFGARLD 224