BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.4849.p (354 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775895.1| universal stress protein [Herbaspirillum ser... 500 e-139 ref|YP_001099809.1| putative universal stress protein [Herminiim... 300 2e-79 ref|ZP_08274013.1| Universal stress protein [Oxalobacteraceae ba... 276 3e-72 ref|ZP_08276134.1| Universal stress protein [Oxalobacteraceae ba... 268 2e-69 ref|ZP_04578127.1| universal stress protein family protein [Oxal... 266 5e-69 >ref|YP_003775895.1| universal stress protein [Herbaspirillum seropedicae SmR1] emb|CAM32694.1| Probable universal stress protein [Herbaspirillum seropedicae] gb|ADJ63987.1| universal stress protein [Herbaspirillum seropedicae SmR1] Length = 274 Score = 500 bits (1287), Expect = e-139, Method: Composition-based stats. Identities = 266/274 (97%), Positives = 271/274 (98%) Query: 81 MSYKSILVHVDQSRHAAQRIRIAAELARAQQAHLIGSAVSGISSFITMEGAAYIAAQMDG 140 MSYKSILVHVDQSRHAAQRIRIAAELARAQQAHLIGS+VSGISSFITMEGAAYIAAQMDG Sbjct: 1 MSYKSILVHVDQSRHAAQRIRIAAELARAQQAHLIGSSVSGISSFITMEGAAYIAAQMDG 60 Query: 141 FRDRALAALENFDKIANSVGVPSCEKRFVDDDAEGGLALQARYADLVVVSQADLDDANDS 200 FRDRALAALENFDKIANSVGVPSCEKRFVDDDAEGGLALQARYADLVVVSQADLDDA+DS Sbjct: 61 FRDRALAALENFDKIANSVGVPSCEKRFVDDDAEGGLALQARYADLVVVSQADLDDADDS 120 Query: 201 FLTDLPEYVMLNSPRPVLIIPSAGEFKQVGKNALIAWDGSMESTRAITAALPLLRQADNV 260 FLTDLPEYVMLNSPRPVLIIPSAGEFK VGKNAL+AWDGSMESTRA+TAALPLLRQADNV Sbjct: 121 FLTDLPEYVMLNSPRPVLIIPSAGEFKHVGKNALVAWDGSMESTRAVTAALPLLRQADNV 180 Query: 261 TVVLFNSDKRLGTHGEQPGADIALYLARHGVKVEVAQEQTTLDIGNALLSLAADKGSDLL 320 TVV+FNSDKRLGTHGEQPGADIALYLARHGV VEVAQEQT LDIGNALLSLAADKGSDLL Sbjct: 181 TVVIFNSDKRLGTHGEQPGADIALYLARHGVTVEVAQEQTPLDIGNALLSLAADKGSDLL 240 Query: 321 VMGGYGHTRFREVLLGGVTLTILKTMTLPVLMAH 354 VMGGYGHTRFREVLLGGVTLTILKTMTLPVLMAH Sbjct: 241 VMGGYGHTRFREVLLGGVTLTILKTMTLPVLMAH 274 >ref|YP_001099809.1| putative universal stress protein [Herminiimonas arsenicoxydans] emb|CAL61682.1| Putative universal stress protein UspA [Herminiimonas arsenicoxydans] Length = 274 Score = 300 bits (769), Expect = 2e-79, Method: Composition-based stats. Identities = 146/274 (53%), Positives = 207/274 (75%) Query: 81 MSYKSILVHVDQSRHAAQRIRIAAELARAQQAHLIGSAVSGISSFITMEGAAYIAAQMDG 140 M+YK+ILVHVD S +A RIRIAA +A A+ AHLIG+A++GIS F+ + + + ++++ Sbjct: 1 MAYKTILVHVDHSPQSADRIRIAAGIALAENAHLIGTAMTGISRFLYEDHSILLNSRIEM 60 Query: 141 FRDRALAALENFDKIANSVGVPSCEKRFVDDDAEGGLALQARYADLVVVSQADLDDANDS 200 +RA +L +F+ I +GVPS EKR ++DD GL LQARY+DLVV+SQ + ++ + S Sbjct: 61 LCERANQSLIDFEAIVKQIGVPSYEKRLINDDPAEGLVLQARYSDLVVISQKNFNEFDPS 120 Query: 201 FLTDLPEYVMLNSPRPVLIIPSAGEFKQVGKNALIAWDGSMESTRAITAALPLLRQADNV 260 +++LPEYV L S RP+LI+P + + LIAWDGSM +TRAI+ ALPLL++A +V Sbjct: 121 LVSNLPEYVTLQSVRPILIVPYEAQPSLLANRILIAWDGSMSATRAISNALPLLKRAQDV 180 Query: 261 TVVLFNSDKRLGTHGEQPGADIALYLARHGVKVEVAQEQTTLDIGNALLSLAADKGSDLL 320 T+V+FN+ +L HGE PGADIALYLARHGVKV+V ++ +IG+AL+ LA+D+G DL+ Sbjct: 181 TIVVFNAVAQLDVHGELPGADIALYLARHGVKVDVLSQENETNIGSALMVLASDRGYDLV 240 Query: 321 VMGGYGHTRFREVLLGGVTLTILKTMTLPVLMAH 354 VMGGYGH R RE++LGGVTLT+L M++P+LM+H Sbjct: 241 VMGGYGHARLREIILGGVTLTVLGQMSVPILMSH 274 >ref|ZP_08274013.1| Universal stress protein [Oxalobacteraceae bacterium IMCC9480] gb|EGF32533.1| Universal stress protein [Oxalobacteraceae bacterium IMCC9480] Length = 290 Score = 276 bits (707), Expect = 3e-72, Method: Composition-based stats. Identities = 153/290 (52%), Positives = 205/290 (70%), Gaps = 16/290 (5%) Query: 81 MSYKSILVHVDQSRHAAQRIRIAAELARAQQAHLIGSAVSGISSFITM-----EGAAYIA 135 MSY SILVHVD S A+RIRI AELA AHL G+A +G+S + EG + Sbjct: 1 MSYPSILVHVDASVRTAERIRIGAELALRTDAHLTGTATTGVSGLFYLPGAIGEGNLQLG 60 Query: 136 AQMDGFRDRALAALENFDKIANSVGVPSCEKRFVDDDAEGGLALQARYADLVVVSQADLD 195 A +D + R ALE F+++ + +GV S EKR VD++A G++LQARY+DLV+V Q + D Sbjct: 61 AMLDMLKQRGTFALEEFEQLVSKMGVKSFEKRLVDEEAGPGVSLQARYSDLVIVGQTNPD 120 Query: 196 DANDSFLTDLPEYVMLNSPRPVLIIPSAGEFKQVGKNALIAWDGSMESTRAITAALPLLR 255 + + S + PEY++++S RPVLIIP G F+ +G+ L+AWDGSM++TRA+TAA+PLL+ Sbjct: 121 EPSPSTADEFPEYLVMHSGRPVLIIPYIGHFEHIGRKILVAWDGSMQATRAVTAAIPLLQ 180 Query: 256 QADNVTVVLFNSDKRLGTHGEQPGADIALYLARHGVKVEVAQEQTT-----------LDI 304 QA V +V+FN + + HG++PGADIALYLARHG+K++V TT LD+ Sbjct: 181 QAQQVQLVVFNPEAKPDVHGDEPGADIALYLARHGIKLDVTILTTTEKASKSGRMDDLDV 240 Query: 305 GNALLSLAADKGSDLLVMGGYGHTRFREVLLGGVTLTILKTMTLPVLMAH 354 GNALLS AAD +DL+VMGGY H+RFR+VLLGGVT TIL +MT+PVLMAH Sbjct: 241 GNALLSHAADVDADLIVMGGYAHSRFRQVLLGGVTNTILTSMTVPVLMAH 290 >ref|ZP_08276134.1| Universal stress protein [Oxalobacteraceae bacterium IMCC9480] gb|EGF30399.1| Universal stress protein [Oxalobacteraceae bacterium IMCC9480] Length = 279 Score = 268 bits (684), Expect = 2e-69, Method: Composition-based stats. Identities = 143/279 (51%), Positives = 188/279 (67%), Gaps = 5/279 (1%) Query: 81 MSYKSILVHVDQSRHAAQRIRIAAELARAQQAHLIGSAVSGIS-----SFITMEGAAYIA 135 MSYK+IL+H+D+S + RI +AA+LA + +AHLIG A +G+S S T G I Sbjct: 1 MSYKTILIHLDESPNIDARIDLAAQLAISHEAHLIGLATTGVSHYFYESLSTGAGDPGIG 60 Query: 136 AQMDGFRDRALAALENFDKIANSVGVPSCEKRFVDDDAEGGLALQARYADLVVVSQADLD 195 ++ R++A L++F+ +GV S EK DD+AE LA++ARY DLV++ Q D + Sbjct: 61 PYLETLREQARGRLQHFEDKVRRLGVSSYEKHLADDEAESCLAMRARYCDLVILGQYDPE 120 Query: 196 DANDSFLTDLPEYVMLNSPRPVLIIPSAGEFKQVGKNALIAWDGSMESTRAITAALPLLR 255 S DLPEYV LN PVLIIP AG + + LIAWDG E+ +A+ ALP L+ Sbjct: 121 GTIPSVYADLPEYVTLNGGCPVLIIPYAGSYPLKPDHILIAWDGGQEAAKAVRNALPFLQ 180 Query: 256 QADNVTVVLFNSDKRLGTHGEQPGADIALYLARHGVKVEVAQEQTTLDIGNALLSLAADK 315 A +V V +FN+ +R HGE+PGADIALYL RH VK V QEQT + +G ALLSLAAD Sbjct: 181 AAKSVEVAVFNAQQRPDNHGEEPGADIALYLTRHHVKANVRQEQTEIPVGEALLSLAADI 240 Query: 316 GSDLLVMGGYGHTRFREVLLGGVTLTILKTMTLPVLMAH 354 +DLLVMG YGH+RFREVL+GGV+ TIL ++TLPVLM+H Sbjct: 241 NADLLVMGCYGHSRFREVLMGGVSRTILDSITLPVLMSH 279 >ref|ZP_04578127.1| universal stress protein family protein [Oxalobacter formigenes OXCC13] gb|EEO29100.1| universal stress protein family protein [Oxalobacter formigenes OXCC13] Length = 278 Score = 266 bits (679), Expect = 5e-69, Method: Composition-based stats. Identities = 138/279 (49%), Positives = 191/279 (68%), Gaps = 6/279 (2%) Query: 81 MSYKSILVHVDQSRHAAQRIRIAAELARAQQAHLIGSAVSGISSFITM-----EGAAYIA 135 MSYK+ILVH+D+ HA +RIRIA ++A A+ A LIG+A+ G+S+ E IA Sbjct: 1 MSYKTILVHLDRESHAKERIRIACQMAIAEDAFLIGAAMVGVSTLTFQQAHIDEKDPVIA 60 Query: 136 AQMDGFRDRALAALENFDKIANSVGVPSCEKRFVDDDAEGGLALQARYADLVVVSQADLD 195 + + DRA A ++ F++ A +GVPS E R VD +A G++L +R+ADLVV+ Q DL Sbjct: 61 SHLRFLHDRAGAFVKEFEEQAKKMGVPSFEGRIVDGEANQGISLLSRFADLVVIGQTDLH 120 Query: 196 DANDSFLTDLPEYVMLNSPRPVLIIPSAGEFKQVGKNALIAWDGSMESTRAITAALPLLR 255 + + D PEYVM+N+ RPVLI+PS+ K+VGK +I W+ S E+TRA+ +P+LR Sbjct: 121 ETSPVVAPDFPEYVMMNAGRPVLIVPSSFG-KEVGKRVMICWNASREATRAVADTIPVLR 179 Query: 256 QADNVTVVLFNSDKRLGTHGEQPGADIALYLARHGVKVEVAQEQTTLDIGNALLSLAADK 315 +AD V + +FN DK + E G D+A+YLARHG+ VEV Q +IG+A+L+LA ++ Sbjct: 180 RADVVQIAMFNIDKEPDVNAEHAGHDLAVYLARHGINVEVLPPQVDKNIGSAVLALAEEQ 239 Query: 316 GSDLLVMGGYGHTRFREVLLGGVTLTILKTMTLPVLMAH 354 DLLVMGGYGHTRFRE LLGGVT T+L T+PVLM+H Sbjct: 240 SCDLLVMGGYGHTRFREFLLGGVTRTVLGDATMPVLMSH 278