BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.4828.p         (75 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003775912.1| hypothetical protein Hsero_2505 [Herbaspiril...   130   6e-29
ref|YP_299768.1| hypothetical protein Reut_B5579 [Ralstonia eutr...    98   4e-19
ref|YP_001796622.1| hypothetical protein RALTA_B0185 [Cupriavidu...    92   2e-17
ref|ZP_07308078.1| conserved hypothetical protein [Streptomyces ...    92   3e-17
ref|ZP_04998864.1| conserved hypothetical protein [Streptomyces ...    92   4e-17

>ref|YP_003775912.1| hypothetical protein Hsero_2505 [Herbaspirillum seropedicae SmR1]
 gb|ADJ64004.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1]
          Length = 75

 Score =  130 bits (327), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 66/75 (88%), Positives = 71/75 (94%)

Query: 1  MTERKQDNSNTYKIIEVVGSSPNGTDEAIRNAIADVAKTVKNVDWFEVTQCRGHVENGSI 60
          M ERK DNSNTYKIIEVVGSSPN +D+AIRNA+ADV KTVK+VDWFEVTQCRGHVENGSI
Sbjct: 1  MNERKLDNSNTYKIIEVVGSSPNSSDDAIRNALADVVKTVKHVDWFEVTQCRGHVENGSI 60

Query: 61 GHFQVGLKIGFRVES 75
          GHFQVGLKIGFRVE+
Sbjct: 61 GHFQVGLKIGFRVEA 75


>ref|YP_299768.1| hypothetical protein Reut_B5579 [Ralstonia eutropha JMP134]
 gb|AAZ64924.1| Protein of unknown function DUF1458 [Ralstonia eutropha JMP134]
          Length = 68

 Score = 98.2 bits (243), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 44/66 (66%), Positives = 57/66 (86%)

Query: 8  NSNTYKIIEVVGSSPNGTDEAIRNAIADVAKTVKNVDWFEVTQCRGHVENGSIGHFQVGL 67
          + +TYK++E+VGSSP+G+D AIRNAIA   +T+KN+DWFEV + RGH+ENG +GHFQV L
Sbjct: 2  SDHTYKLVEIVGSSPDGSDHAIRNAIAKAGETIKNIDWFEVVETRGHIENGKVGHFQVTL 61

Query: 68 KIGFRV 73
          KIGFRV
Sbjct: 62 KIGFRV 67


>ref|YP_001796622.1| hypothetical protein RALTA_B0185 [Cupriavidus taiwanensis LMG
          19424]
 emb|CAP63385.1| conserved hypothetical protein, DUF1458; putative exported
          protein [Cupriavidus taiwanensis LMG 19424]
          Length = 99

 Score = 92.4 bits (228), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 39/65 (60%), Positives = 56/65 (86%)

Query: 9  SNTYKIIEVVGSSPNGTDEAIRNAIADVAKTVKNVDWFEVTQCRGHVENGSIGHFQVGLK 68
          ++TYK++E+VGSSP+G D+AI++AIA   +T+KN+DWFEV + RGH++NG I H+QV LK
Sbjct: 34 NHTYKLVEIVGSSPDGCDQAIQSAIAKAGETIKNIDWFEVVETRGHIQNGKIAHYQVTLK 93

Query: 69 IGFRV 73
          +GFRV
Sbjct: 94 VGFRV 98


>ref|ZP_07308078.1| conserved hypothetical protein [Streptomyces viridochromogenes
          DSM 40736]
 gb|EFL36447.1| conserved hypothetical protein [Streptomyces viridochromogenes
          DSM 40736]
          Length = 82

 Score = 92.0 bits (227), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 39/67 (58%), Positives = 56/67 (83%)

Query: 8  NSNTYKIIEVVGSSPNGTDEAIRNAIADVAKTVKNVDWFEVTQCRGHVENGSIGHFQVGL 67
          + +TY++ E+VG+SP+G D+AIRN I   ++T++N+DWFEVTQ RG +ENG I H+QVGL
Sbjct: 13 SEHTYRVTEIVGTSPDGVDQAIRNGIGRASETLRNLDWFEVTQVRGQLENGQIAHWQVGL 72

Query: 68 KIGFRVE 74
          K+GFR+E
Sbjct: 73 KVGFRLE 79


>ref|ZP_04998864.1| conserved hypothetical protein [Streptomyces sp. Mg1]
 gb|EDX23375.1| conserved hypothetical protein [Streptomyces sp. Mg1]
          Length = 87

 Score = 91.7 bits (226), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 39/67 (58%), Positives = 56/67 (83%)

Query: 8  NSNTYKIIEVVGSSPNGTDEAIRNAIADVAKTVKNVDWFEVTQCRGHVENGSIGHFQVGL 67
          +++TY++ E+VG+S  G D+AIRN +A   +T++N+DWFEVTQ RGH+ENG I H+QVGL
Sbjct: 18 SNHTYRVTEIVGTSDEGIDQAIRNGLARAGQTLRNLDWFEVTQMRGHIENGEIAHYQVGL 77

Query: 68 KIGFRVE 74
          K+GFR+E
Sbjct: 78 KVGFRLE 84