BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.4824.p (448 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775915.1| nitric oxide dioxygenase [Herbaspirillum ser... 644 0.0 sp|Q8GAZ4|HMP_BURST RecName: Full=Flavohemoprotein; AltName: Ful... 535 e-150 ref|YP_001860195.1| oxidoreductase FAD-binding subunit [Burkhold... 531 e-148 ref|ZP_03268644.1| Oxidoreductase FAD-binding domain protein [Bu... 531 e-148 ref|ZP_08141815.1| bifunctional nitric oxide dioxygenase/dihydro... 529 e-148 >ref|YP_003775915.1| nitric oxide dioxygenase [Herbaspirillum seropedicae SmR1] gb|ADJ64007.1| nitric oxide dioxygenase (flavohemoglobin) protein [Herbaspirillum seropedicae SmR1] Length = 397 Score = 644 bits (1662), Expect = 0.0, Method: Composition-based stats. Identities = 332/397 (83%), Positives = 354/397 (89%) Query: 52 MLTDAQLAIVKSTVPLLESGGEALTTHFYKMLMRDYPQVHPLFNRAHQASGDQPRALANG 111 MLTDAQLAIVKSTVPLLESGGEALTTHFYKMLMRDYPQV PLFNRAHQASGDQPRALANG Sbjct: 1 MLTDAQLAIVKSTVPLLESGGEALTTHFYKMLMRDYPQVRPLFNRAHQASGDQPRALANG 60 Query: 112 VLMYARHIDRLEEMGPLAAQIINKHVAVQVQPEHYPMVGDCLLRAIREVLGAEIATDPVI 171 VLMYARHIDRLEE+GPLAAQIINKHVAVQV PEHYPMVGDCLLRAIREVLGAEIATD VI Sbjct: 61 VLMYARHIDRLEELGPLAAQIINKHVAVQVLPEHYPMVGDCLLRAIREVLGAEIATDAVI 120 Query: 172 DAWGAAYGQLAEILIGAEEGIYQATEKADGGWRGLRKFIVVRRVDESEEITSFYFMPEDG 231 DAW AAYGQLA+ILIGAE Y+A +A GGW G R FIV R+V ESEEITSF+F+P+DG Sbjct: 121 DAWAAAYGQLADILIGAERQQYEAKAQAPGGWSGARNFIVSRKVAESEEITSFHFVPQDG 180 Query: 232 GALLDFEPGQYIGLRMVVDGLEQRRQYSLSAPLRQQGQPLQYRISVKREAEGKVSRHLHD 291 G LLDF PGQYIGLRMVVDG EQRRQYSLSA LRQ GQP QYRISVKRE GKVSR LHD Sbjct: 181 GELLDFAPGQYIGLRMVVDGEEQRRQYSLSALLRQAGQPPQYRISVKREPGGKVSRQLHD 240 Query: 292 EIHVGAVVELFPPAGDFTLTANAKPLALISGGVGITPMMTMLAAALPSGRPVHFIHAARH 351 +IHVG+VVELFPPAG+FTL A+ KPLALISGGVGITPMM+MLAAALPSGRP+HFIHAARH Sbjct: 241 QIHVGSVVELFPPAGEFTLMASDKPLALISGGVGITPMMSMLAAALPSGRPIHFIHAARH 300 Query: 352 AGVHAFRRELEQLAAQHPQLQLHFCYEQARAGDPAAHANGFIDPARLQQWLPATRDVDAY 411 GVHAFRR+LE+LAA+HPQLQL FCYEQ R GD A HA G I+ + LQQWLP D+DAY Sbjct: 301 GGVHAFRRQLEELAARHPQLQLRFCYEQPRQGDAAPHATGLIERSLLQQWLPGNPDLDAY 360 Query: 412 FVGPKPFMKAIKRALGALGVPAAQSRYEFFGPAAALE 448 FVGPK FMKAIKR L LGVPAAQSRYEFFGPAA+L+ Sbjct: 361 FVGPKSFMKAIKRQLAELGVPAAQSRYEFFGPAASLD 397 >sp|Q8GAZ4|HMP_BURST RecName: Full=Flavohemoprotein; AltName: Full=Flavohemoglobin; AltName: Full=Hemoglobin-like protein; AltName: Full=Nitric oxide dioxygenase; Short=NO oxygenase; Short=NOD dbj|BAC16771.1| flavohemoprotein homolog [Burkholderia sp. TH2] Length = 393 Score = 535 bits (1378), Expect = e-150, Method: Composition-based stats. Identities = 262/397 (65%), Positives = 313/397 (78%), Gaps = 4/397 (1%) Query: 52 MLTDAQLAIVKSTVPLLESGGEALTTHFYKMLMRDYPQVHPLFNRAHQASGDQPRALANG 111 ML+ AIVK+TVPLLESGGEALTTHFYK ++ +YP V PLFN+AHQ SGDQPRALAN Sbjct: 1 MLSAEHRAIVKATVPLLESGGEALTTHFYKTMLAEYPSVRPLFNQAHQQSGDQPRALANA 60 Query: 112 VLMYARHIDRLEEMGPLAAQIINKHVAVQVQPEHYPMVGDCLLRAIREVLGAEIATDPVI 171 VLMYARHID+LE++G L +QI+NKHVA+ + PEHYP+VG CLLRAIREVLGAEIATD VI Sbjct: 61 VLMYARHIDQLEQLGGLVSQIVNKHVALNILPEHYPIVGACLLRAIREVLGAEIATDAVI 120 Query: 172 DAWGAAYGQLAEILIGAEEGIYQATEKADGGWRGLRKFIVVRRVDESEEITSFYFMPEDG 231 +AWGAAY QLA++LIG EE +Y E A GGWRG R F+V R+V ES+EITSFY P DG Sbjct: 121 EAWGAAYQQLADLLIGLEENVYVEKETATGGWRGTRAFVVARKVKESDEITSFYLRPADG 180 Query: 232 GALLDFEPGQYIGLRMVVDGLEQRRQYSLSAPLRQQGQPLQYRISVKREAEGKVSRHLHD 291 G LL+F PGQYIGL+++VDG E RR YSLSA + +YRISVKRE GK S +LHD Sbjct: 181 GELLEFHPGQYIGLKLIVDGEEIRRNYSLSAAANGR----EYRISVKREPNGKASNYLHD 236 Query: 292 EIHVGAVVELFPPAGDFTLTANAKPLALISGGVGITPMMTMLAAALPSGRPVHFIHAARH 351 ++ GA ++L P+GDFTL N KPL LISGGVGITP + ML AAL + RP+HFIHA RH Sbjct: 237 SVNEGATLDLLTPSGDFTLEHNDKPLVLISGGVGITPTLAMLNAALQTSRPIHFIHATRH 296 Query: 352 AGVHAFRRELEQLAAQHPQLQLHFCYEQARAGDPAAHANGFIDPARLQQWLPATRDVDAY 411 GVHAFR +++LAA+HPQL+ + YE+ R D A HA G+ID ARL +WLPATRDVD Y Sbjct: 297 GGVHAFRDHIDELAARHPQLKRFYVYEKPRHDDEAHHAEGYIDEARLIEWLPATRDVDVY 356 Query: 412 FVGPKPFMKAIKRALGALGVPAAQSRYEFFGPAAALE 448 F+GPK FM+A+KR L +GVP QSRYEFFGPA+AL+ Sbjct: 357 FLGPKSFMQAVKRHLKTIGVPEKQSRYEFFGPASALD 393 >ref|YP_001860195.1| oxidoreductase FAD-binding subunit [Burkholderia phymatum STM815] gb|ACC73149.1| Oxidoreductase FAD-binding domain protein [Burkholderia phymatum STM815] Length = 393 Score = 531 bits (1368), Expect = e-148, Method: Composition-based stats. Identities = 260/397 (65%), Positives = 315/397 (79%), Gaps = 4/397 (1%) Query: 52 MLTDAQLAIVKSTVPLLESGGEALTTHFYKMLMRDYPQVHPLFNRAHQASGDQPRALANG 111 ML+ AIVK+TVPLLESGGEALTTHFYK+++ +YP V PLFN+AHQ SGDQPRALAN Sbjct: 1 MLSAEHRAIVKATVPLLESGGEALTTHFYKVMLSEYPSVRPLFNQAHQQSGDQPRALANA 60 Query: 112 VLMYARHIDRLEEMGPLAAQIINKHVAVQVQPEHYPMVGDCLLRAIREVLGAEIATDPVI 171 VLMYARHI++LE++G L +QI+NKHVA+ + PEHYP+VG CLLRAIREVLG EIATD VI Sbjct: 61 VLMYARHIEQLEQLGGLVSQIVNKHVALNILPEHYPIVGTCLLRAIREVLGPEIATDAVI 120 Query: 172 DAWGAAYGQLAEILIGAEEGIYQATEKADGGWRGLRKFIVVRRVDESEEITSFYFMPEDG 231 +AWGAAYGQLA++LIG EE +Y E + GGWRG R F+V R+V ES+EITSFY P DG Sbjct: 121 EAWGAAYGQLADLLIGLEEKVYVEKETSKGGWRGTRPFVVARKVKESDEITSFYLRPADG 180 Query: 232 GALLDFEPGQYIGLRMVVDGLEQRRQYSLSAPLRQQGQPLQYRISVKREAEGKVSRHLHD 291 G +L+F+PGQYIGLR++VDG E RR YSLSA + +YRISVKRE GK S +LHD Sbjct: 181 GDVLEFQPGQYIGLRLIVDGEEIRRNYSLSAAANGR----EYRISVKREPNGKGSNYLHD 236 Query: 292 EIHVGAVVELFPPAGDFTLTANAKPLALISGGVGITPMMTMLAAALPSGRPVHFIHAARH 351 + G ++L+ P+GDFTL + KPL LISGGVGITP + ML AAL + RP+HFIHA RH Sbjct: 237 VVKEGDTLDLYAPSGDFTLEHSDKPLVLISGGVGITPTLAMLNAALQTSRPIHFIHATRH 296 Query: 352 AGVHAFRRELEQLAAQHPQLQLHFCYEQARAGDPAAHANGFIDPARLQQWLPATRDVDAY 411 GVHAFR +++LAA+HPQL+ + YE+ R D A HA GFID RL +W+PATRDVD Y Sbjct: 297 GGVHAFRDAIDELAARHPQLKRFYVYEKPRQQDDAHHAEGFIDEDRLIEWMPATRDVDVY 356 Query: 412 FVGPKPFMKAIKRALGALGVPAAQSRYEFFGPAAALE 448 F+GPKPFMKA+KR L A+GVP QSR+EFFGPAAAL+ Sbjct: 357 FLGPKPFMKAVKRHLKAIGVPEKQSRFEFFGPAAALD 393 >ref|ZP_03268644.1| Oxidoreductase FAD-binding domain protein [Burkholderia sp. H160] gb|EDZ99751.1| Oxidoreductase FAD-binding domain protein [Burkholderia sp. H160] Length = 393 Score = 531 bits (1367), Expect = e-148, Method: Composition-based stats. Identities = 263/397 (66%), Positives = 320/397 (80%), Gaps = 4/397 (1%) Query: 52 MLTDAQLAIVKSTVPLLESGGEALTTHFYKMLMRDYPQVHPLFNRAHQASGDQPRALANG 111 ML+ AI+K+TVPLLESGGEALTTHFYK+++ ++P+V P+FN+A+QASG QPRALANG Sbjct: 1 MLSAEHRAIIKATVPLLESGGEALTTHFYKLMLSEHPEVRPMFNQANQASGMQPRALANG 60 Query: 112 VLMYARHIDRLEEMGPLAAQIINKHVAVQVQPEHYPMVGDCLLRAIREVLGAEIATDPVI 171 VLMYARHID+L+++G L AQIINKHV++ VQPEHYP+VG CLLRAIREVLGAE+ATD VI Sbjct: 61 VLMYARHIDQLDQLGGLVAQIINKHVSLNVQPEHYPIVGKCLLRAIREVLGAEVATDAVI 120 Query: 172 DAWGAAYGQLAEILIGAEEGIYQATEKADGGWRGLRKFIVVRRVDESEEITSFYFMPEDG 231 +AW AAY QLA++LIG EE IY +E A GGWRG R+F V R+V ES+EITSFY P+DG Sbjct: 121 EAWAAAYQQLADLLIGLEEKIYADSEAAPGGWRGTRRFRVARKVRESDEITSFYLRPDDG 180 Query: 232 GALLDFEPGQYIGLRMVVDGLEQRRQYSLSAPLRQQGQPLQYRISVKREAEGKVSRHLHD 291 G LL F+PGQYIG+R++++G E RR YSLSA +YRISVKRE G VS++LH+ Sbjct: 181 GELLAFQPGQYIGVRLMINGEEVRRNYSLSA----MSDGREYRISVKREPNGTVSKYLHE 236 Query: 292 EIHVGAVVELFPPAGDFTLTANAKPLALISGGVGITPMMTMLAAALPSGRPVHFIHAARH 351 +I ++LF PAG+FTL KPL LISGGVGITP M ML AAL + RPVHFIHAARH Sbjct: 237 QIQENDTLDLFAPAGEFTLQPGDKPLVLISGGVGITPTMAMLQAALKTNRPVHFIHAARH 296 Query: 352 AGVHAFRRELEQLAAQHPQLQLHFCYEQARAGDPAAHANGFIDPARLQQWLPATRDVDAY 411 AGVHAFR ++ LAA+HPQL+ +CYEQ RAGD A+A G++D A L++WLP TRDVD Y Sbjct: 297 AGVHAFRDTIDALAARHPQLKRFYCYEQRRAGDADANAVGYVDEASLKKWLPETRDVDVY 356 Query: 412 FVGPKPFMKAIKRALGALGVPAAQSRYEFFGPAAALE 448 F+GP FMKAIK+ L A+GVP +QSRYEFFGPAAALE Sbjct: 357 FLGPVAFMKAIKKGLKAIGVPESQSRYEFFGPAAALE 393 >ref|ZP_08141815.1| bifunctional nitric oxide dioxygenase/dihydropteridine reductase 2 [Pseudomonas sp. TJI-51] gb|EGB96892.1| bifunctional nitric oxide dioxygenase/dihydropteridine reductase 2 [Pseudomonas sp. TJI-51] Length = 391 Score = 529 bits (1363), Expect = e-148, Method: Composition-based stats. Identities = 269/397 (67%), Positives = 315/397 (79%), Gaps = 6/397 (1%) Query: 52 MLTDAQLAIVKSTVPLLESGGEALTTHFYKMLMRDYPQVHPLFNRAHQASGDQPRALANG 111 ML Q AI+K+TVPLLESGGEALTTHFYKM++ +YP+V PLFN+AHQASGDQPRALANG Sbjct: 1 MLNADQRAIIKATVPLLESGGEALTTHFYKMMLSEYPEVRPLFNQAHQASGDQPRALANG 60 Query: 112 VLMYARHIDRLEEMGPLAAQIINKHVAVQVQPEHYPMVGDCLLRAIREVLGAEIATDPVI 171 VLMYARHID+LE++G L QIINKHVA+Q+ PEHYP+VG CLLRAI EVLG +IAT VI Sbjct: 61 VLMYARHIDQLEQLGGLVGQIINKHVALQILPEHYPIVGSCLLRAIEEVLGKDIATPAVI 120 Query: 172 DAWGAAYGQLAEILIGAEEGIYQATEKADGGWRGLRKFIVVRRVDESEEITSFYFMPEDG 231 +AWGAAYGQLA+ILIGAEE +YQ E A+GGWRG R+F +VRR ES EI SFYF P DG Sbjct: 121 EAWGAAYGQLADILIGAEENLYQQKEAAEGGWRGTREFRLVRREQESSEIVSFYFAPVDG 180 Query: 232 GALLDFEPGQYIGLRMVVDGLEQRRQYSLSAPLRQQGQPLQYRISVKREAEGKVSRHLHD 291 +L EPGQYIGL++ +DG EQRR YSLSA + +YRISVKREA GKVS +LHD Sbjct: 181 KPVLKAEPGQYIGLKLNIDGAEQRRNYSLSALCDGK----EYRISVKREAGGKVSNYLHD 236 Query: 292 EIHVGAVVELFPPAGDFTLTANAKPLALISGGVGITPMMTMLAAALPSGRPVHFIHAARH 351 ++ VG ++LFPPAGDFTLTA+AKPL LISGGVGITP + ML AAL +GR VHFIH AR+ Sbjct: 237 QLQVGDTLQLFPPAGDFTLTASAKPLVLISGGVGITPTLAMLQAALHTGRQVHFIHCARN 296 Query: 352 AGVHAFRRELEQLAAQHPQLQLHFCYEQARAGDPAAHANGFIDPARLQQWLPATRDVDAY 411 VHAFR ++ LAA+HPQL+ +CY +A G AA+A G + L +WLP RDVDAY Sbjct: 297 GAVHAFRDWIDGLAARHPQLKRFYCYAEADGG--AANAVGVLSEDLLAEWLPRERDVDAY 354 Query: 412 FVGPKPFMKAIKRALGALGVPAAQSRYEFFGPAAALE 448 F+GPK FM A+KR L LGVP QSRYEFFGPAAALE Sbjct: 355 FLGPKGFMAAVKRQLKGLGVPEQQSRYEFFGPAAALE 391