BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.4823.p         (118 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002538413.1| conserved hypothetical protein [Ricinus comm...   185   2e-45
gb|AEG71864.1| conserved hypothetical protein [Ralstonia solanac...   137   4e-31
ref|YP_002257682.1| hypothetical protein RSIPO_03991 [Ralstonia ...   136   9e-31
emb|CAQ36815.1| conserved hypothetical protein [Ralstonia solana...   136   1e-30
ref|NP_522517.1| hypothetical protein RS02287 [Ralstonia solanac...   136   1e-30

>ref|XP_002538413.1| conserved hypothetical protein [Ricinus communis]
 ref|YP_003775917.1| hypothetical protein Hsero_2510 [Herbaspirillum seropedicae SmR1]
 gb|EEF23971.1| conserved hypothetical protein [Ricinus communis]
 gb|ADJ64009.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1]
          Length = 118

 Score =  185 bits (469), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 95/112 (84%), Positives = 105/112 (93%)

Query: 1   MSEKLSAERHTPDELTQELEALDLEIVRCAVICQVRLFDPGVLNQVMDNNEQVCGQAHPT 60
           M+EKLSA+RHTPDEL+QELEALD+EIVR AVICQVRLFDPG+LNQVMDNNEQVCG+ HPT
Sbjct: 1   MTEKLSAQRHTPDELSQELEALDMEIVRHAVICQVRLFDPGILNQVMDNNEQVCGEPHPT 60

Query: 61  AFQSLRGLLYLHFDMHRQLAQTYGADDAEHIIQRVHEHLRPRIGEQLGSLFD 112
           AFQSLRGLLYLHFDMHRQLA+TYG  DAE II+RVH HL+PRIGEQL SLF+
Sbjct: 61  AFQSLRGLLYLHFDMHRQLAETYGPADAEVIIERVHAHLKPRIGEQLHSLFE 112


>gb|AEG71864.1| conserved hypothetical protein [Ralstonia solanacearum Po82]
          Length = 119

 Score =  137 bits (346), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 68/114 (59%), Positives = 86/114 (75%)

Query: 1   MSEKLSAERHTPDELTQELEALDLEIVRCAVICQVRLFDPGVLNQVMDNNEQVCGQAHPT 60
           MSEKL AER  P+E   +LEALDLEIVR AVICQV+L +PGV+ +V+DN+ + C   H T
Sbjct: 1   MSEKLGAERLMPEEWKDDLEALDLEIVRLAVICQVKLLEPGVIQRVLDNDARDCVNDHKT 60

Query: 61  AFQSLRGLLYLHFDMHRQLAQTYGADDAEHIIQRVHEHLRPRIGEQLGSLFDTG 114
           AF SLRGLL+LHF M + LA+ YG  +A  I++RV  HL+PRIG+QLGSL + G
Sbjct: 61  AFASLRGLLFLHFQMQKDLAEAYGPSNAMEIVRRVWAHLQPRIGDQLGSLPNPG 114


>ref|YP_002257682.1| hypothetical protein RSIPO_03991 [Ralstonia solanacearum IPO1609]
 emb|CAQ59569.1| conserved hypothetical protein [Ralstonia solanacearum IPO1609]
          Length = 119

 Score =  136 bits (343), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 68/114 (59%), Positives = 85/114 (74%)

Query: 1   MSEKLSAERHTPDELTQELEALDLEIVRCAVICQVRLFDPGVLNQVMDNNEQVCGQAHPT 60
           MSEKL AER  P+E   +LEALDLEIVR AVICQV+L +PGV+  V+DN+ + C   H T
Sbjct: 1   MSEKLGAERLMPEEWKDDLEALDLEIVRLAVICQVKLLEPGVIQHVLDNDARDCLNDHKT 60

Query: 61  AFQSLRGLLYLHFDMHRQLAQTYGADDAEHIIQRVHEHLRPRIGEQLGSLFDTG 114
           AF SLRGLL+LHF M + LA+ YG  +A  I++RV  HL+PRIG+QLGSL + G
Sbjct: 61  AFASLRGLLFLHFQMQKDLAEAYGPSNAMEIVRRVWSHLQPRIGDQLGSLPNPG 114


>emb|CAQ36815.1| conserved hypothetical protein [Ralstonia solanacearum MolK2]
          Length = 119

 Score =  136 bits (342), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 68/114 (59%), Positives = 85/114 (74%)

Query: 1   MSEKLSAERHTPDELTQELEALDLEIVRCAVICQVRLFDPGVLNQVMDNNEQVCGQAHPT 60
           MSEKL AER  P+E   +LEALDLEIVR AVICQV+L +PGV+  V+DN+ + C   H T
Sbjct: 1   MSEKLGAERLMPEEWKDDLEALDLEIVRLAVICQVKLLEPGVIQHVLDNDARDCLNDHKT 60

Query: 61  AFQSLRGLLYLHFDMHRQLAQTYGADDAEHIIQRVHEHLRPRIGEQLGSLFDTG 114
           AF SLRGLL+LHF M + LA+ YG  +A  I++RV  HL+PRIG+QLGSL + G
Sbjct: 61  AFASLRGLLFLHFQMQKDLAEAYGPSNAMEIVRRVWAHLQPRIGDQLGSLPNPG 114


>ref|NP_522517.1| hypothetical protein RS02287 [Ralstonia solanacearum GMI1000]
 emb|CAD18107.1| hypothetical protein RSp0956 [Ralstonia solanacearum GMI1000]
          Length = 119

 Score =  136 bits (342), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 66/114 (57%), Positives = 86/114 (75%)

Query: 1   MSEKLSAERHTPDELTQELEALDLEIVRCAVICQVRLFDPGVLNQVMDNNEQVCGQAHPT 60
           MSEKL AER  P+E   +LEALDLEIVR A+ICQV+L +PGV+ +V+DN+ + C   + T
Sbjct: 1   MSEKLGAERLMPNEWRDDLEALDLEIVRFAIICQVKLLEPGVIQRVLDNDARDCIHGNQT 60

Query: 61  AFQSLRGLLYLHFDMHRQLAQTYGADDAEHIIQRVHEHLRPRIGEQLGSLFDTG 114
           AF SLRGLL+LHF M + LA+ YG  DA  I++RV  HL+PR+G+QLGSL + G
Sbjct: 61  AFASLRGLLFLHFQMQKDLAEAYGPSDATEIVRRVWAHLQPRVGDQLGSLPNPG 114