BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.4816.p (440 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775925.1| hypothetical protein Hsero_2518 [Herbaspiril... 810 0.0 ref|YP_002495097.1| hypothetical protein Mnod_8503 [Methylobacte... 632 e-179 ref|YP_004750847.1| phosphoserine phosphatase [Collimonas fungiv... 589 e-166 ref|YP_004227131.1| hypothetical protein BC1001_0615 [Burkholder... 462 e-128 ref|YP_001863109.1| hypothetical protein Bphy_7058 [Burkholderia... 462 e-128 >ref|YP_003775925.1| hypothetical protein Hsero_2518 [Herbaspirillum seropedicae SmR1] gb|ADJ64017.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1] Length = 440 Score = 810 bits (2092), Expect = 0.0, Method: Composition-based stats. Identities = 409/440 (92%), Positives = 425/440 (96%) Query: 1 MNNNHKPTTDTAAPVLKRRGFLGGLLAAAAGGALATIATPGQAAARAEVALDRAKWAARN 60 MNNNHKPTTDTAAP LKRRGFLGGLLAAAAGGALATIATPGQAAARAEVALDRAKWAARN Sbjct: 1 MNNNHKPTTDTAAPTLKRRGFLGGLLAAAAGGALATIATPGQAAARAEVALDRAKWAARN 60 Query: 61 HEMVAQMIAEHGKLAPGYQSGKRPYAVFDWDNTSIMNDCEEALLMYQINTLSFKLTPNEF 120 HEMVAQMIAEHGKLA GYQS KRPYAVFDWDNTSIMNDCEEALLM+QINTLSFKLTP EF Sbjct: 61 HEMVAQMIAEHGKLAAGYQSSKRPYAVFDWDNTSIMNDCEEALLMHQINTLSFKLTPAEF 120 Query: 121 AAITRQNVPPGPFSKDFKNAAGNIVDLEAICADLDADYAFLYANYKGMAGSKSLEEITAT 180 +AITRQNVPPGPFSKDFKNAAG +VDLEAICADLDADYAFLYANYKGMAGSKSLEE++AT Sbjct: 121 SAITRQNVPPGPFSKDFKNAAGEVVDLEAICADLDADYAFLYANYKGMAGSKSLEEVSAT 180 Query: 181 PEFQDFRTKLYYLYEAVNDTHGVAVGYPWVIYFFANMSVAEVSALAEASNDAALGAALTK 240 PEFQDFR KLYYLYEAVNDTHGVAVGYPWVIYFFANMSVAEVSALAEASNDAALGAALTK Sbjct: 181 PEFQDFRAKLYYLYEAVNDTHGVAVGYPWVIYFFANMSVAEVSALAEASNDAALGAALTK 240 Query: 241 VKYTSPADRAGKAGVVSVSHFHGIRLCTEIATLMDTLRRNGIDVYVCTASLEDVVAVFAT 300 VKYTSPA R G+AGVVSVSHFHGIRLCTEIATLMD LRRNGIDVYVCTASLE+VVAVFAT Sbjct: 241 VKYTSPAQRPGRAGVVSVSHFHGIRLCTEIATLMDALRRNGIDVYVCTASLEEVVAVFAT 300 Query: 301 HPKYGYHVTRENVIGLRLERSGHSFRNAYLKEWPLTWGPGKTVAIKQVLVAQKGYGPLFV 360 HPKYGYHV+R+N+IGLRLER+G RNAYLK+WPLTWGPGKTVAI+QVLVAQKGYGPLFV Sbjct: 301 HPKYGYHVSRDNIIGLRLERNGQVLRNAYLKDWPLTWGPGKTVAIRQVLVAQKGYGPLFV 360 Query: 361 AGDSDGDYDMLRDFPETRYGLIVNRMKNGKIGELSKLAADQISAAKPRFLLQGRQESTGN 420 AGDSDGDYDMLRDFPETRYG IVNRMKNGKIGELSKLAA+QI+A +PRFLLQGRQESTGN Sbjct: 361 AGDSDGDYDMLRDFPETRYGFIVNRMKNGKIGELSKLAAEQINAGRPRFLLQGRQESTGN 420 Query: 421 WLPAETSIKYGKTAPQLLTS 440 WLPAE SIKYGKTAPQLLTS Sbjct: 421 WLPAEASIKYGKTAPQLLTS 440 >ref|YP_002495097.1| hypothetical protein Mnod_8503 [Methylobacterium nodulans ORS 2060] gb|ACL62605.1| conserved hypothetical protein [Methylobacterium nodulans ORS 2060] Length = 433 Score = 632 bits (1629), Expect = e-179, Method: Composition-based stats. Identities = 302/423 (71%), Positives = 343/423 (81%) Query: 16 LKRRGFLGGLLAAAAGGALATIATPGQAAARAEVALDRAKWAARNHEMVAQMIAEHGKLA 75 ++RRGFLGGL+ A A A +V LDRAKWA RNH V+++IAEHG + Sbjct: 10 VRRRGFLGGLMLATTAAGAAMTTARATGQADEKVGLDRAKWAPRNHAAVSRLIAEHGNTS 69 Query: 76 PGYQSGKRPYAVFDWDNTSIMNDCEEALLMYQINTLSFKLTPNEFAAITRQNVPPGPFSK 135 P Y G+RPYAVFDWDNTSIMNDC+EALLMYQINTLSFKLTP EFA I RQNVPPG FS Sbjct: 70 PNYNPGRRPYAVFDWDNTSIMNDCQEALLMYQINTLSFKLTPAEFAEIIRQNVPPGKFSD 129 Query: 136 DFKNAAGNIVDLEAICADLDADYAFLYANYKGMAGSKSLEEITATPEFQDFRTKLYYLYE 195 D+KNAAG VDL+AICADLDADY +L+ YKG++GS+ L +I T F+DFR KLY+LYE Sbjct: 130 DYKNAAGTTVDLDAICADLDADYMWLHGAYKGLSGSQPLADIVKTAHFEDFRAKLYFLYE 189 Query: 196 AVNDTHGVAVGYPWVIYFFANMSVAEVSALAEASNDAALGAALTKVKYTSPADRAGKAGV 255 AVNDTHGV +GYPWVIY NM+V +VS LAEASNDAALGAAL + KYTSP DRAG+AGV Sbjct: 190 AVNDTHGVDIGYPWVIYLLTNMTVPDVSRLAEASNDAALGAALVRTKYTSPVDRAGRAGV 249 Query: 256 VSVSHFHGIRLCTEIATLMDTLRRNGIDVYVCTASLEDVVAVFATHPKYGYHVTRENVIG 315 VSVSHFHGIRLCTE+ LMDTL+RNGIDVYV TASLEDVVAVFAT PKYGY++ R +V+G Sbjct: 250 VSVSHFHGIRLCTEVGGLMDTLQRNGIDVYVSTASLEDVVAVFATFPKYGYNIQRSHVLG 309 Query: 316 LRLERSGHSFRNAYLKEWPLTWGPGKTVAIKQVLVAQKGYGPLFVAGDSDGDYDMLRDFP 375 LRLE+ G F+NAY K WPL WGPGKT IK+ LV++KGYGP+ VAGDSDGDYDMLRDF Sbjct: 310 LRLEQEGDVFKNAYRKGWPLNWGPGKTAVIKRELVSKKGYGPILVAGDSDGDYDMLRDFA 369 Query: 376 ETRYGLIVNRMKNGKIGELSKLAADQISAAKPRFLLQGRQESTGNWLPAETSIKYGKTAP 435 +TR GLIVNRMK GKIGELSK AAD + A PRFLLQGRQE+TGNW P E+SIKYGKT P Sbjct: 370 DTRVGLIVNRMKKGKIGELSKAAADTLHAEAPRFLLQGRQETTGNWRPQESSIKYGKTEP 429 Query: 436 QLL 438 QLL Sbjct: 430 QLL 432 >ref|YP_004750847.1| phosphoserine phosphatase [Collimonas fungivorans Ter331] gb|AEK60024.1| Phosphoserine phosphatase [Collimonas fungivorans Ter331] Length = 538 Score = 589 bits (1518), Expect = e-166, Method: Composition-based stats. Identities = 292/425 (68%), Positives = 335/425 (78%), Gaps = 6/425 (1%) Query: 17 KRRGFL-GGLLAAAAGGALAT--IATPGQAAARAEVALDRAKWAARNHEMVAQMIAEHGK 73 KRR L GGL+A A AL + +A +AA +ALDRAKW RNH+ + ++A +G Sbjct: 116 KRRTLLTGGLVAGLAATALPSELLAKDSKAAG---LALDRAKWGTRNHQQLQALLARNGN 172 Query: 74 LAPGYQSGKRPYAVFDWDNTSIMNDCEEALLMYQINTLSFKLTPNEFAAITRQNVPPGPF 133 + GY +RPYAVFDWDNTSIMND EEALLMYQINTLSFKL+P E AI RQNVP GPF Sbjct: 173 SSAGYNPKRRPYAVFDWDNTSIMNDTEEALLMYQINTLSFKLSPQEMGAIIRQNVPAGPF 232 Query: 134 SKDFKNAAGNIVDLEAICADLDADYAFLYANYKGMAGSKSLEEITATPEFQDFRTKLYYL 193 + DFKNAAG VDLEAIC+D+D DY +LY NY+ + GS+ LEEI T +FQDFR KLYYL Sbjct: 233 AADFKNAAGKAVDLEAICSDIDDDYQYLYDNYEKLNGSRKLEEIRETAQFQDFRAKLYYL 292 Query: 194 YEAVNDTHGVAVGYPWVIYFFANMSVAEVSALAEASNDAALGAALTKVKYTSPADRAGKA 253 YEAVN+T+GV VGYPWVIYFF NMSVAEV LAEASND LG L K KYTSPA + G+A Sbjct: 293 YEAVNETYGVNVGYPWVIYFFTNMSVAEVQQLAEASNDHNLGLGLVKTKYTSPAAQPGQA 352 Query: 254 GVVSVSHFHGIRLCTEIATLMDTLRRNGIDVYVCTASLEDVVAVFATHPKYGYHVTRENV 313 G+VSV+HFHGIRLCTEIATLMD L+++GIDVYV +ASLEDVVAVFAT PKYGY+V RE+V Sbjct: 353 GIVSVTHFHGIRLCTEIATLMDALQQSGIDVYVSSASLEDVVAVFATTPKYGYNVKREHV 412 Query: 314 IGLRLERSGHSFRNAYLKEWPLTWGPGKTVAIKQVLVAQKGYGPLFVAGDSDGDYDMLRD 373 +GLRLE + F N Y WPL WGPGKT IK+ LVA KGYGP+FVAGDSDGDYDMLRD Sbjct: 413 LGLRLETANGVFVNRYKAGWPLNWGPGKTEVIKKELVAAKGYGPVFVAGDSDGDYDMLRD 472 Query: 374 FPETRYGLIVNRMKNGKIGELSKLAADQISAAKPRFLLQGRQESTGNWLPAETSIKYGKT 433 F +T+ G+IVNRMK GKIG+LSKLAADQI A PRFLLQGR E TGNW+P+E SIKYGKT Sbjct: 473 FADTQLGMIVNRMKKGKIGDLSKLAADQIPAKSPRFLLQGRNELTGNWMPSEASIKYGKT 532 Query: 434 APQLL 438 LL Sbjct: 533 GETLL 537 >ref|YP_004227131.1| hypothetical protein BC1001_0615 [Burkholderia sp. CCGE1001] gb|ADX54071.1| hypothetical protein BC1001_0615 [Burkholderia sp. CCGE1001] Length = 424 Score = 462 bits (1190), Expect = e-128, Method: Composition-based stats. Identities = 230/423 (54%), Positives = 289/423 (68%) Query: 16 LKRRGFLGGLLAAAAGGALATIATPGQAAARAEVALDRAKWAARNHEMVAQMIAEHGKLA 75 ++RR FL L AAA G+L T A +A +LD +W+ N + ++ HG + Sbjct: 1 MQRRQFLNTLAVAAATGSLVTKAGAAEAGKPTADSLDPGRWSPLNAARLQSVLDHHGVKS 60 Query: 76 PGYQSGKRPYAVFDWDNTSIMNDCEEALLMYQINTLSFKLTPNEFAAITRQNVPPGPFSK 135 Y +RPYAVFDWDNT IMNDCEEAL+MYQIN L +K+TP+EF + ++VP GPF++ Sbjct: 61 RQYNPNRRPYAVFDWDNTCIMNDCEEALMMYQINHLQYKMTPDEFVQVMWKDVPKGPFTR 120 Query: 136 DFKNAAGNIVDLEAICADLDADYAFLYANYKGMAGSKSLEEITATPEFQDFRTKLYYLYE 195 D+ G V +E + AD+++DY +LYANYKG+AG KSLE I T +F+DFR KLY++Y Sbjct: 121 DYTTVEGKPVTMEDLAADVESDYRWLYANYKGLAGDKSLEAIQETDQFKDFRAKLYFMYG 180 Query: 196 AVNDTHGVAVGYPWVIYFFANMSVAEVSALAEASNDAALGAALTKVKYTSPADRAGKAGV 255 A+ DTH + VGY W+IYF+ NM+ E+ A+A ASND +G AL KV Y SP GKAGV Sbjct: 181 AICDTHPLEVGYKWIIYFYRNMTPVEMQAMAAASNDHGIGDALIKVAYESPHTLPGKAGV 240 Query: 256 VSVSHFHGIRLCTEIATLMDTLRRNGIDVYVCTASLEDVVAVFATHPKYGYHVTRENVIG 315 VS HFHGIR+ EI LM TLR NGIDVYV TASL+DVV VFA HP YGY V ENVIG Sbjct: 241 VSDKHFHGIRIHEEIRALMHTLRANGIDVYVSTASLDDVVRVFAGHPNYGYGVPPENVIG 300 Query: 316 LRLERSGHSFRNAYLKEWPLTWGPGKTVAIKQVLVAQKGYGPLFVAGDSDGDYDMLRDFP 375 +RLE + + Y W +GPGKTV I+ L ++KGYGPL V GDSDGD MLRDF Sbjct: 301 MRLEMKDGKYTSDYKSGWHFNYGPGKTVGIRGELESKKGYGPLLVFGDSDGDAWMLRDFK 360 Query: 376 ETRYGLIVNRMKNGKIGELSKLAADQISAAKPRFLLQGRQESTGNWLPAETSIKYGKTAP 435 +T G+IVNRMK G+IG SKLAA+Q+ RF+LQGR E TG +P E S+KYGKT Sbjct: 361 DTAAGVIVNRMKKGEIGVDSKLAAEQLGNPNARFILQGRDEHTGLMIPDEKSVKYGKTER 420 Query: 436 QLL 438 +LL Sbjct: 421 KLL 423 >ref|YP_001863109.1| hypothetical protein Bphy_7058 [Burkholderia phymatum STM815] gb|ACC76063.1| conserved hypothetical protein [Burkholderia phymatum STM815] Length = 424 Score = 462 bits (1188), Expect = e-128, Method: Composition-based stats. Identities = 228/423 (53%), Positives = 291/423 (68%) Query: 16 LKRRGFLGGLLAAAAGGALATIATPGQAAARAEVALDRAKWAARNHEMVAQMIAEHGKLA 75 ++RR FL L A A G+L + A +A +LD +W+ N + ++ +HG + Sbjct: 1 MQRRQFLNTLAVATAAGSLVSKAGATEAGKPTADSLDPGRWSPLNAARLQSVLDQHGVRS 60 Query: 76 PGYQSGKRPYAVFDWDNTSIMNDCEEALLMYQINTLSFKLTPNEFAAITRQNVPPGPFSK 135 Y +RPYAVFDWDNT IMNDCEEALLMYQI+ L +K+TP+EF + ++VP GPF K Sbjct: 61 RQYNPSRRPYAVFDWDNTCIMNDCEEALLMYQIHHLQYKMTPDEFVQVMWKDVPKGPFMK 120 Query: 136 DFKNAAGNIVDLEAICADLDADYAFLYANYKGMAGSKSLEEITATPEFQDFRTKLYYLYE 195 D+ G V +E + AD+++DY +LYANYKG+AG KSLE I T +F+DFR KLY++Y+ Sbjct: 121 DYTTVEGKPVTMEDLAADVESDYRWLYANYKGLAGDKSLEAIQETDQFKDFRAKLYFMYD 180 Query: 196 AVNDTHGVAVGYPWVIYFFANMSVAEVSALAEASNDAALGAALTKVKYTSPADRAGKAGV 255 A+ DTH + VGY W+IYF+ NM+ E+ A+A+ASND +G AL KV Y SP+ GKAGV Sbjct: 181 AICDTHPLEVGYKWIIYFYRNMTPVEMQAMAKASNDHGIGDALRKVAYQSPSTLPGKAGV 240 Query: 256 VSVSHFHGIRLCTEIATLMDTLRRNGIDVYVCTASLEDVVAVFATHPKYGYHVTRENVIG 315 VS HFHGIR+ EI +M TLR NGIDVYV TASL+DVV VFA HP YGY V ENVIG Sbjct: 241 VSDKHFHGIRIHEEIRAVMHTLRANGIDVYVSTASLDDVVRVFAGHPNYGYGVPPENVIG 300 Query: 316 LRLERSGHSFRNAYLKEWPLTWGPGKTVAIKQVLVAQKGYGPLFVAGDSDGDYDMLRDFP 375 +RLE + + Y W +GPGKTV I+ L ++KGYGPL V GDSDGD MLRDF Sbjct: 301 MRLEMKDGKYTSDYKNGWHFNYGPGKTVGIRGELESKKGYGPLLVFGDSDGDAWMLRDFK 360 Query: 376 ETRYGLIVNRMKNGKIGELSKLAADQISAAKPRFLLQGRQESTGNWLPAETSIKYGKTAP 435 +T G+IVNRMK G+IG SKLAA+Q+ RF+LQGR E TG +P E S+KYGKT Sbjct: 361 DTAAGVIVNRMKKGEIGADSKLAAEQLGDPNARFILQGRDEHTGLMIPDEKSVKYGKTER 420 Query: 436 QLL 438 +LL Sbjct: 421 KLL 423