BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.4799.p         (95 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003775937.1| hypothetical protein Hsero_2530 [Herbaspiril...   143   1e-32

>ref|YP_003775937.1| hypothetical protein Hsero_2530 [Herbaspirillum seropedicae SmR1]
 gb|ADJ64029.1| hypothetical protein Hsero_2530 [Herbaspirillum seropedicae SmR1]
          Length = 124

 Score =  143 bits (360), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 77/95 (81%), Positives = 84/95 (88%)

Query: 1   MSEPMQTSAFDHQRLLDMVGQFEAELQKLPAGSTEADQLREDIARLRQHLSEPQPHAGQV 60
           MSEP QT  FDHQRLLDMVGQFE EL+KLPAGS EA+QLREDIARLRQHLS  QPH   V
Sbjct: 30  MSEPAQTPRFDHQRLLDMVGQFETELEKLPAGSAEAEQLREDIARLRQHLSHAQPHEESV 89

Query: 61  GDTWHSLRRAADSLENQVLKDSPYITEMGRIIGLI 95
            D+WH+LRRAADS+ENQVL+DSPYITEMGRIIGL+
Sbjct: 90  RDSWHALRRAADSIENQVLRDSPYITEMGRIIGLL 124