BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.4798.p         (95 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|ZP_06244740.1| transcriptional regulator, XRE family [Victiv...    54   7e-06
ref|ZP_08274665.1| hypothetical protein IMCC9480_3292 [Oxalobact...    54   9e-06

>ref|ZP_06244740.1| transcriptional regulator, XRE family [Victivallis vadensis ATCC
          BAA-548]
 gb|EFA99377.1| transcriptional regulator, XRE family [Victivallis vadensis ATCC
          BAA-548]
          Length = 76

 Score = 54.3 bits (129), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 24/64 (37%), Positives = 40/64 (62%)

Query: 9  KINEAAGFGAAIRAARKAAGMRIADVCALANVSIQTLSDIESGKPTVSIGKMLDVADCLG 68
          K+  A   GA IR  RK  G+  A++  +AN  ++ +SD+E+GK T+ I K+L+V + LG
Sbjct: 5  KLQSAEAIGALIRTTRKTQGLSQAELAGVANTGVRFISDLENGKGTIQIRKLLNVLNALG 64

Query: 69 VSFF 72
          +  +
Sbjct: 65 LGLY 68


>ref|ZP_08274665.1| hypothetical protein IMCC9480_3292 [Oxalobacteraceae bacterium
          IMCC9480]
 gb|EGF31863.1| hypothetical protein IMCC9480_3292 [Oxalobacteraceae bacterium
          IMCC9480]
          Length = 86

 Score = 53.5 bits (127), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 26/56 (46%), Positives = 35/56 (62%)

Query: 16 FGAAIRAARKAAGMRIADVCALANVSIQTLSDIESGKPTVSIGKMLDVADCLGVSF 71
           GA +R ARKA G+  AD+  LAN   + L D+E+GKPT+ + K LDV   LG+  
Sbjct: 22 LGALVRQARKAQGLTQADIAGLANTGTRFLVDLENGKPTIQLQKTLDVMALLGLEL 77