BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.4797.p (457 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_08272704.1| HipA-like protein [Oxalobacteraceae bacterium... 575 e-162 ref|ZP_02906037.1| HipA N-terminal domain protein [Burkholderia ... 284 3e-74 ref|YP_001628607.1| HipA protein [Bordetella petrii DSM 12804] >... 281 1e-73 ref|YP_776424.1| HipA domain-containing protein [Burkholderia am... 278 2e-72 ref|YP_001857303.1| HipA domain-containing protein [Burkholderia... 277 3e-72 >ref|ZP_08272704.1| HipA-like protein [Oxalobacteraceae bacterium IMCC9480] gb|EGF33825.1| HipA-like protein [Oxalobacteraceae bacterium IMCC9480] Length = 450 Score = 575 bits (1482), Expect = e-162, Method: Composition-based stats. Identities = 286/455 (62%), Positives = 349/455 (76%), Gaps = 9/455 (1%) Query: 1 MSMFLNIWMGGVRVGELWHHTDENLFSLRYDDDWTQSG-HALSPALPLIRPEAESRERHS 59 M++ L +W VGEL H +D N FS Y W ++G + LSPALPL + S ERH Sbjct: 1 MNLKLKVWDASKLVGELVHDSDLNRFSFAYSRQWVEAGGYPLSPALPLFPAKDRSAERHG 60 Query: 60 MEVRNFFQNLLPEGKALDDAVANYHLSKANLAGLLHALGRESAGALVFTANAVTPHDKDE 119 + RN+FQNLLPEG+ALDDA + +++SKANLAGLLHALGRESAGAL+FT++ P++K E Sbjct: 61 ADARNYFQNLLPEGRALDDAASMHNISKANLAGLLHALGRESAGALMFTSDTTAPYEKSE 120 Query: 120 RQARRLSSEELSQRIRARPEHPFTVWDGRVRLSIAGYQDKLAVLQQGDAWFLPETLQQSS 179 R L+++ELS+RI+ARP FTVWDGR+RLSIAGYQDKLA+LQ WFLPE+ Q SS Sbjct: 121 VPPRLLANDELSKRIQARPHDSFTVWDGRLRLSIAGYQDKLAILQLNGTWFLPESAQHSS 180 Query: 180 THILKPEPVSRQLAGMTTNELMCMLLADAVGVRAAAVRLAHVPEPVLVVERFDRVPARGD 239 THILKPEPV+ QLAGMTTNEL CMLLA AV + AA RL HVPEPVLV+ERFDR A Sbjct: 181 THILKPEPVNPQLAGMTTNELTCMLLAAAVKLNVAAARLDHVPEPVLVIERFDREFA--- 237 Query: 240 MQAAQADGTQVLRRQCIDGCQALGLPVDFKYERPFGDGDDVKEIRDGASLKRFFRLLGDR 299 + V R QCIDGCQ LGLPVDFKYE+P+G+G +VK IR GAS++RFF LL ++ Sbjct: 238 -----SPTHHVRRLQCIDGCQLLGLPVDFKYEQPYGNGPEVKNIRGGASVQRFFELLDNK 292 Query: 300 DLMHSTGPAKLAFLRWLIFQVLIGNTDAHAKNLSFFSDTNRLVLAPAYDMVSGLALIDAQ 359 +LM +TGPAKL FLRW+IFQVLIGNTDAHAKN+SFFSD+ RL LAPAYD+VS LALIDA Sbjct: 293 ELMRATGPAKLGFLRWVIFQVLIGNTDAHAKNVSFFSDSTRLALAPAYDLVSDLALIDAH 352 Query: 360 VADQLAMAVGDNFDPRTIRAFDWALMAHECALAPRLIVNALKELATLSLKKLPDICHEVL 419 V+D LAMA+GDNFDPR++ A+DWALMAHE +AP+L+ + L+ LA LK+LPDI +VL Sbjct: 353 VSDHLAMAIGDNFDPRSVHAYDWALMAHESKIAPKLVASELRSLANQCLKQLPDIRRQVL 412 Query: 420 AQGGDPRMTQRVASVVQSQCEAALACAKDILAVNP 454 QGGD RM +RV+ VVQ QC+ AL+CA I + P Sbjct: 413 EQGGDARMVERVSDVVQDQCKTALSCADQITVIGP 447 >ref|ZP_02906037.1| HipA N-terminal domain protein [Burkholderia ambifaria MEX-5] gb|EDT42814.1| HipA N-terminal domain protein [Burkholderia ambifaria MEX-5] Length = 450 Score = 284 bits (726), Expect = 3e-74, Method: Composition-based stats. Identities = 182/456 (39%), Positives = 247/456 (54%), Gaps = 21/456 (4%) Query: 5 LNIWMGGVRVGELWHHTDENLFSLRYDDDWTQSGHA--LSPALPLIRPEAESRERHSMEV 62 L + G VG+L + + + YD W G A LSP +PL + + V Sbjct: 5 LRVSTDGSPVGQLTYDAGRDDYGFSYDPAWLARGDAFALSPCIPL-----DGGTPPAGAV 59 Query: 63 RNFFQNLLPEGKALDDAVANYHLSKANLAGLLHALGRESAGALVFTAN---AVTPHDKDE 119 + F NLLPEG+ALD A + Y +SK N+ GL+ LG+E GAL F + A + E Sbjct: 60 QRFVGNLLPEGRALDVAASMYQISKDNVFGLIRMLGKEPVGALSFVPDDDSAAEVPESPE 119 Query: 120 RQARRLSSEELSQRIRARPEHPFTVWDGRVRLSIAGYQDKLAVLQQGDAWFLPETLQQSS 179 R +S EEL+ RIR R PF VWD RVRLSIAG+QDKL VL +G+ + L + SS Sbjct: 120 PVRRPISVEELTDRIRKRDAIPFAVWDDRVRLSIAGHQDKLQVLVEGEQFSLVDG-ALSS 178 Query: 180 THILKPEPVSRQLAGMTTNELMCMLLADAVGVRAAAVRLAHVPEPVLVVERFDRVPAR-- 237 +HILKPE S+ M NE CM LA +G+ A V + +PEP+L++ERFDR+ Sbjct: 179 SHILKPESRSQNAPFMVANEHFCMTLAARMGLPVAHVEIRRIPEPILLIERFDRIVTTEP 238 Query: 238 GDMQAAQADGTQVLRRQCIDGCQALGLPVDFKYERPFGDGDDVKEIRDGASLKRFFRLLG 297 GD A V R IDGCQAL LP KYER G+ +DV+ IR+G S +R F L Sbjct: 239 GDPHRVSA----VRRLHIIDGCQALDLPATLKYERNLGNNEDVRNIREGVSFERLFSLTP 294 Query: 298 DRDLMHSTGPAKLAFLRWLIFQVLIGNTDAHAKNLSFFSDTNRLVLAPAYDMVSGLALID 357 + + A+ A LRW + Q+LIGN+DAH KN+SFF + L AP YD+V D Sbjct: 295 S---LETPAAARSAMLRWALLQLLIGNSDAHGKNISFFVSSGGLDPAPLYDLVCVNVYGD 351 Query: 358 AQVADQLAMAVGDNFDPRTIRAFDWALMAHECALAPRLIVNALKELATLSLKKLPDICHE 417 A V D +AMA GD F + AF A AH + P L+ + +ATL+ K P++ Sbjct: 352 AYVQD-MAMAYGDVFRTEELTAFALADFAHRAQIRPALVAREMTRMATLAAKLAPELARS 410 Query: 418 VLAQGGDPRMTQRVASVVQSQCEAALACAKDILAVN 453 + G + R++ V++Q + L A + VN Sbjct: 411 DVYAGDEHAWMHRISEYVRNQADGVLRIAPMVPKVN 446 >ref|YP_001628607.1| HipA protein [Bordetella petrii DSM 12804] emb|CAP40336.1| HipA protein [Bordetella petrii] Length = 447 Score = 281 bits (720), Expect = 1e-73, Method: Composition-based stats. Identities = 185/449 (41%), Positives = 240/449 (53%), Gaps = 19/449 (4%) Query: 13 RVGELWHHTDENLFSLRYDDDWTQSGHA--LSPALPLIRPEAESRERHSMEVRNFFQNLL 70 RVG L + E+ + YD W A LSP +PL P A S V F QNLL Sbjct: 14 RVGTLVFESTEDRYEFIYDPAWPGIAQAFPLSPHIPLAGPPAASGV-----VARFLQNLL 68 Query: 71 PEGKALDDAVANYHLSKANLAGLLHALGRESAGALVFTANAVTPHDKDERQARRLSSEEL 130 PEG+ALD A + + +SK N+ GL++ LGRE GAL F A R +S EL Sbjct: 69 PEGRALDVASSFHRVSKGNIFGLINLLGREPVGALSFLAEDADASQAAAEPRRPISDAEL 128 Query: 131 SQRIRARPEHPFTVWDGRVRLSIAGYQDKLAVLQQGDAWFLPETLQQSSTHILKPEPVSR 190 S+RIRAR PF VWDG+VRLS+AG+QDKL VL +GD L E +STHILKPE + Sbjct: 129 SERIRARDSVPFPVWDGKVRLSVAGFQDKLQVLLEGDQVSLVEA-PLASTHILKPESPNP 187 Query: 191 QLAGMTTNELMCMLLADAVGVRAAAVRLAHVPEPVLVVERFDRVPARGDMQAAQADGTQV 250 M NE CM LA +G+ A VR+ +PEPVL++ERFDR ++ AQ T V Sbjct: 188 ATPFMVANEHFCMTLALHMGLPVAPVRIRRIPEPVLLIERFDRT-----VEWAQDGPTAV 242 Query: 251 L--RRQCIDGCQALGLPVDFKYERPFGDGDDVKEIRDGASLKRFFRLLGDRDLMHSTGPA 308 RR ID CQAL +PV KYER G + V+ IRDG S +R F L D + A Sbjct: 243 AVHRRHVIDACQALDMPVALKYERNMGSAEHVRHIRDGVSFERLFALADD---FENPAVA 299 Query: 309 KLAFLRWLIFQVLIGNTDAHAKNLSFFSDTNRLVLAPAYDMVSGLALIDAQVADQLAMAV 368 + LRW I Q+LIGN+DAH KN+SFF L A YD+V A A + ++AM Sbjct: 300 RQFLLRWAILQLLIGNSDAHGKNVSFFLSGAGLAPANLYDLVCVHAYGQA-IEQEMAMGY 358 Query: 369 GDNFDPRTIRAFDWALMAHECALAPRLIVNALKELATLSLKKLPDICHEVLAQGGDPRMT 428 GD F + AFD A AH L L+ L +A + K++ + + + + Sbjct: 359 GDEFRCNAVTAFDLADFAHRAGLPATLVARELASMAKQAQKRVAALAQHEVYTPNERQHV 418 Query: 429 QRVASVVQSQCEAALACAKDILAVNPAYL 457 Q +A+ V +Q E L A + V+P L Sbjct: 419 QGIAAFVLAQAERLLRIAPQVPKVDPELL 447 >ref|YP_776424.1| HipA domain-containing protein [Burkholderia ambifaria AMMD] gb|ABI90090.1| HipA domain protein [Burkholderia ambifaria AMMD] Length = 450 Score = 278 bits (710), Expect = 2e-72, Method: Composition-based stats. Identities = 179/456 (39%), Positives = 246/456 (53%), Gaps = 21/456 (4%) Query: 5 LNIWMGGVRVGELWHHTDENLFSLRYDDDWTQSGHA--LSPALPLI--RPEAESRERHSM 60 L + G VG+L + + + YD W G A LSP +PL +P A + +R Sbjct: 5 LRVSTDGSPVGQLTYDAGRDDYGFSYDPAWLARGDAFALSPCIPLDGGKPPAGAVQR--- 61 Query: 61 EVRNFFQNLLPEGKALDDAVANYHLSKANLAGLLHALGRESAGALVFTAN---AVTPHDK 117 F NLLPEG+ALD A + Y +SK N+ GL+ LG+E GAL F + A + Sbjct: 62 ----FVGNLLPEGRALDVAASMYQISKDNVFGLIRMLGKEPVGALSFIPDDDSAARAPES 117 Query: 118 DERQARRLSSEELSQRIRARPEHPFTVWDGRVRLSIAGYQDKLAVLQQGDAWFLPETLQQ 177 E R +S EEL+ RIR R PF VWD +VRLSIAG+QDKL VL +G+ + L + Sbjct: 118 PEPVRRPISVEELTDRIRKRDAIPFAVWDDQVRLSIAGHQDKLQVLVEGEQFSLVDG-AL 176 Query: 178 SSTHILKPEPVSRQLAGMTTNELMCMLLADAVGVRAAAVRLAHVPEPVLVVERFDRVPAR 237 SS+HILKPE S M NE CM LA +G+ A V + +PEP+L++ERFDR+ Sbjct: 177 SSSHILKPESRSPNAPFMVANEHFCMTLAARMGLPVAHVEIRRIPEPILLIERFDRIVTT 236 Query: 238 GDMQAAQADGTQVLRRQCIDGCQALGLPVDFKYERPFGDGDDVKEIRDGASLKRFFRLLG 297 + + V R IDGCQAL LP KYER G+ +DV+ IR+G S +R F L Sbjct: 237 DPADPHRV--SAVRRLHIIDGCQALDLPATLKYERNLGNNEDVRNIREGVSFERLFSLTP 294 Query: 298 DRDLMHSTGPAKLAFLRWLIFQVLIGNTDAHAKNLSFFSDTNRLVLAPAYDMVSGLALID 357 + + A+ A LRW + Q+LIGN+DAH KN+SFF + L AP YD+V D Sbjct: 295 S---LETPAAARSAMLRWALLQLLIGNSDAHGKNISFFVSSGGLDPAPLYDLVCVNVYGD 351 Query: 358 AQVADQLAMAVGDNFDPRTIRAFDWALMAHECALAPRLIVNALKELATLSLKKLPDICHE 417 A V D +AMA GD F + AF A AH + P L+ + +ATL+ K ++ Sbjct: 352 AYVQD-MAMAYGDVFRTEELTAFALADFAHRAQIRPALVAREMTRMATLAAKLASELAQS 410 Query: 418 VLAQGGDPRMTQRVASVVQSQCEAALACAKDILAVN 453 + G + +R++ V+ Q + L A + VN Sbjct: 411 DIYAGDEQAWVRRISEYVRDQADRVLRIAPMVPKVN 446 >ref|YP_001857303.1| HipA domain-containing protein [Burkholderia phymatum STM815] gb|ACC70257.1| HipA N-terminal domain protein [Burkholderia phymatum STM815] Length = 453 Score = 277 bits (708), Expect = 3e-72, Method: Composition-based stats. Identities = 181/442 (40%), Positives = 242/442 (54%), Gaps = 22/442 (4%) Query: 14 VGELWHHTDENLFSLRYDDDWTQSGHA--LSPALPLIRPEAESRERHSMEVRNFFQNLLP 71 VG L + L+ YD +WT +A LSP +PL E H F NLLP Sbjct: 14 VGRLDFDARQTLYRFAYDGNWTARRNAFPLSPHIPLSGAEPAGGAVH-----RFIANLLP 68 Query: 72 EGKALDDAVANYHLSKANLAGLLHALGRESAGALVFTAN--AVTPHDK---DERQARR-L 125 EG+ALD A Y +SK N+ GL+ LG+E GAL F A+ A P ++ ++ ARR + Sbjct: 69 EGRALDVASVVYQVSKDNIYGLIRMLGKEPVGALSFLASGEAGEPIERGAGEQPPARRAI 128 Query: 126 SSEELSQRIRARPEHPFTVWDGRVRLSIAGYQDKLAVLQQGDAWFLPETLQQSSTHILKP 185 S +ELSQRIR R PF VWDG+VRLS+AGYQDKL VL +GD L + SSTHILKP Sbjct: 129 SPDELSQRIRERDAIPFPVWDGKVRLSVAGYQDKLQVLLEGDRIALADG-PLSSTHILKP 187 Query: 186 EPVSRQLAGMTTNELMCMLLADAVGVRAAAVRLAHVPEPVLVVERFDRVPARGDMQAAQA 245 E S M NE CM LA +G++ A V + +PEP+L+++RFDR + AA Sbjct: 188 ESRSPVTPCMVANEHYCMTLASRMGLQTAPVAIRRIPEPILLIQRFDRSVV---LDAADG 244 Query: 246 DGTQ-VLRRQCIDGCQALGLPVDFKYERPFGDGDDVKEIRDGASLKRFFRLLGDRDLMHS 304 + + V RR IDGCQAL LPV FKYER FG+ DV+ IR+G S ++ F L D + Sbjct: 245 ESVEAVRRRHVIDGCQALDLPVSFKYERNFGNTQDVRNIREGVSFEKLFSLQRHLD---N 301 Query: 305 TGPAKLAFLRWLIFQVLIGNTDAHAKNLSFFSDTNRLVLAPAYDMVSGLALIDAQVADQL 364 A+ +RW +FQ+LIGN+DAH KNLSFF L AP YD+VS + QV + Sbjct: 302 PAAARTFMIRWALFQLLIGNSDAHGKNLSFFVHGGGLDPAPLYDLVS-VNAYGEQVEQDM 360 Query: 365 AMAVGDNFDPRTIRAFDWALMAHECALAPRLIVNALKELATLSLKKLPDICHEVLAQGGD 424 AM G+ F I F A A APR + + +A + P++ + + Sbjct: 361 AMGYGEAFRLEEITPFALADFAQRTGTAPRFLAREMARMAQAAKALAPELARSHVYIADE 420 Query: 425 PRMTQRVASVVQSQCEAALACA 446 + Q +A + +Q + L A Sbjct: 421 RALVQTIARFIGAQADRLLQFA 442