BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.4796.p (292 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775938.1| pirin-like protein [Herbaspirillum seropedic... 510 e-142 ref|YP_004848814.1| pirin domain containing protein [Pseudogulbe... 315 7e-84 ref|ZP_03696827.1| Pirin domain protein [Lutiella nitroferrum 20... 311 1e-82 ref|ZP_02361890.1| Uncharacterized BCR, YhhW family COG1741 fami... 302 4e-80 ref|ZP_02504928.1| pirin domain protein [Burkholderia pseudomall... 292 5e-77 >ref|YP_003775938.1| pirin-like protein [Herbaspirillum seropedicae SmR1] gb|ADJ64030.1| pirin-like protein [Herbaspirillum seropedicae SmR1] Length = 292 Score = 510 bits (1314), Expect = e-142, Method: Composition-based stats. Identities = 259/292 (88%), Positives = 276/292 (94%) Query: 1 MSNILHQIHGLTRDIGFPVRRLLPAAAARTVGPFVFFDHMGPVEFDAGTTEGDVRPHPHI 60 MSNI H+IHGLTRDIGFPVRRLLPAAAARTVGPFVFFDHMGPVEFDAGTTEGDVRPHPHI Sbjct: 1 MSNIRHKIHGLTRDIGFPVRRLLPAAAARTVGPFVFFDHMGPVEFDAGTTEGDVRPHPHI 60 Query: 61 GLATVTYLFSGAMMHRDSLGVVQRITPGAVNWMASGRGIVHSERIPDDIREQKVPVHGLQ 120 GLATVTYLFSGAMMHRDSLGVVQRITPGAVNWMA+GRGIVHSERIPDDIREQKVPVHGLQ Sbjct: 61 GLATVTYLFSGAMMHRDSLGVVQRITPGAVNWMAAGRGIVHSERIPDDIREQKVPVHGLQ 120 Query: 121 MWVALPAEQEESEPLFRHYASEDMPEAQIGGARLHVLAGSAFGVSSPVATASPTLYVAGS 180 MWVALPA+QE+ PLF HYA+++MP+ +GGARLHVLAGSAFGVSSPV TASPTLYVAGS Sbjct: 121 MWVALPADQEDGAPLFHHYAADEMPDTVVGGARLHVLAGSAFGVSSPVQTASPTLYVAGS 180 Query: 181 TTQGAELEIAADVQERAVYVVRGDVTLDGERMEPGTLAILAPGAAVALKAVGETVFMILG 240 TT GA LEIAA+VQERAVYVVRG+V+LDGER+E GTLAIL PGAAV L+A GETVFMILG Sbjct: 181 TTDGATLEIAAEVQERAVYVVRGEVSLDGERLEAGTLAILEPGAAVTLQAEGETVFMILG 240 Query: 241 GAPLDGPRFVWWNFVATSREKIEAAKLAWNGRDKSVFPDIPGETEWIPLPAH 292 GAPLDGPRFVWWNFV+TSR+KIEAAK AWN RDKSVFPDIPGE+EWIPLP H Sbjct: 241 GAPLDGPRFVWWNFVSTSRDKIEAAKQAWNARDKSVFPDIPGESEWIPLPTH 292 >ref|YP_004848814.1| pirin domain containing protein [Pseudogulbenkiania sp. NH8B] dbj|BAK78400.1| pirin domain protein [Pseudogulbenkiania sp. NH8B] Length = 293 Score = 315 bits (806), Expect = 7e-84, Method: Composition-based stats. Identities = 172/290 (59%), Positives = 204/290 (70%), Gaps = 3/290 (1%) Query: 1 MSNILHQIHGLTRDIGFPVRRLLPAAAARTVGPFVFFDHMGPVEFDAGTTEGDVRPHPHI 60 MS I + I DIGFPV+RLLPA + VGPFVF DHMGP F A TT GDVRPHPHI Sbjct: 1 MSAIRYLIDPAVADIGFPVQRLLPAPVTQAVGPFVFLDHMGPAHFAAATTAGDVRPHPHI 60 Query: 61 GLATVTYLFSGAMMHRDSLGVVQRITPGAVNWMASGRGIVHSERIPDDIREQKVPVHGLQ 120 GLATVTYLFSGAMMHRDSLG VQRI PGAVN MA+GRGIVHSER+P+DIR + V V G+Q Sbjct: 61 GLATVTYLFSGAMMHRDSLGSVQRIEPGAVNLMAAGRGIVHSERVPEDIRAEGVAVEGMQ 120 Query: 121 MWVALPAEQEESEPLFRHYASEDMPEAQIGGARLHVLAGSAFGVSSPVATASPTLYVAGS 180 MW+ALP E+ P FRHY +P+ + G LH+L G AFG+ SPV S TL+ A Sbjct: 121 MWLALPKALEDMAPEFRHYPEPQLPQQEADGVWLHLLMGEAFGLRSPVHCYSGTLFAAAR 180 Query: 181 TTQGAELEIAADVQERAVYVVRGDVTLDGERMEPGTLAILAPGAAVALKAVGETVFMILG 240 GA + A +ERAVYVV G +TLDG R+E G LA+L PG V L+A E M+LG Sbjct: 181 LAAGAAWSLDAVAEERAVYVVSGGLTLDGTRVEAGQLAVLEPGVTVRLQAGEEARLMLLG 240 Query: 241 GAPLDGPRFVWWNFVATSREKIEAAKLAWNGRDKSVFPDIPGETEWIPLP 290 G PLDGPR++ WNFV++ RE I AA+ W ++ FP +PGETE+IPLP Sbjct: 241 GEPLDGPRYLHWNFVSSRREAIIAARDDW---EQGRFPAVPGETEFIPLP 287 >ref|ZP_03696827.1| Pirin domain protein [Lutiella nitroferrum 2002] gb|EEG10347.1| Pirin domain protein [Lutiella nitroferrum 2002] Length = 293 Score = 311 bits (796), Expect = 1e-82, Method: Composition-based stats. Identities = 172/290 (59%), Positives = 202/290 (69%), Gaps = 3/290 (1%) Query: 1 MSNILHQIHGLTRDIGFPVRRLLPAAAARTVGPFVFFDHMGPVEFDAGTTEGDVRPHPHI 60 MS I + I DIGFPV+RLLPA + VGPFVF DHMGP F A TT GDVRPHPHI Sbjct: 1 MSAIRYLIDPAVADIGFPVQRLLPAPVTQAVGPFVFLDHMGPAHFAAATTAGDVRPHPHI 60 Query: 61 GLATVTYLFSGAMMHRDSLGVVQRITPGAVNWMASGRGIVHSERIPDDIREQKVPVHGLQ 120 GLATVTYLFSGAMMHRDSLG VQRI PGAVN MA+GRGIVHSER P+DIR V V G+Q Sbjct: 61 GLATVTYLFSGAMMHRDSLGSVQRIEPGAVNLMAAGRGIVHSERAPEDIRAGGVAVEGMQ 120 Query: 121 MWVALPAEQEESEPLFRHYASEDMPEAQIGGARLHVLAGSAFGVSSPVATASPTLYVAGS 180 MW+ALP E+ P FRHY +P+ + G LH+L G AFG+ SPV S TL+ A Sbjct: 121 MWLALPKALEDMAPEFRHYPEPQLPQQEADGVWLHLLMGEAFGLRSPVHCYSGTLFAAAR 180 Query: 181 TTQGAELEIAADVQERAVYVVRGDVTLDGERMEPGTLAILAPGAAVALKAVGETVFMILG 240 GA + A +ERAVYVV G +TLDG R+E G LA+L P V L+A ET M+LG Sbjct: 181 LAAGAAWSLDAVAEERAVYVVSGGLTLDGTRVEAGQLAVLEPEVTVRLQAGEETRLMLLG 240 Query: 241 GAPLDGPRFVWWNFVATSREKIEAAKLAWNGRDKSVFPDIPGETEWIPLP 290 G PLDGPR++ WNFV++ RE I AA+ W ++ FP +PGETE+IPLP Sbjct: 241 GEPLDGPRYLHWNFVSSRREAIIAARDDW---EQGRFPAVPGETEFIPLP 287 >ref|ZP_02361890.1| Uncharacterized BCR, YhhW family COG1741 family protein [Burkholderia oklahomensis C6786] Length = 293 Score = 302 bits (773), Expect = 4e-80, Method: Composition-based stats. Identities = 165/279 (59%), Positives = 196/279 (70%), Gaps = 5/279 (1%) Query: 13 RDIG-FPVRRLLPAAAARTVGPFVFFDHMGPVEFDAGTTEGDVRPHPHIGLATVTYLFSG 71 RDIG VRR LPA AARTVGPF+FFDHMGP E AG DVRPHPHIGLATVTYLF G Sbjct: 14 RDIGNLTVRRTLPALAARTVGPFIFFDHMGPAEQPAGAGL-DVRPHPHIGLATVTYLFDG 72 Query: 72 AMMHRDSLGVVQRITPGAVNWMASGRGIVHSERIPDDIREQKVPVHGLQMWVALPAEQEE 131 A+MHRDSLG VQ+I PG VNWM +GRGIVHSER PDD R + VHG+Q WVALP E Sbjct: 73 AIMHRDSLGSVQKIVPGDVNWMTAGRGIVHSERTPDDARARGQTVHGIQTWVALPLAHET 132 Query: 132 SEPLFRHYASEDMPEAQIGGARLHVLAGSAFGVSSPVATASPTLYVAGSTTQGAELEIAA 191 EP F H+A+ +P+ + G + V+AG AFGV SPV T S TLYVA G L + A Sbjct: 133 REPSFEHHAAATLPKLERDGVAMTVIAGDAFGVRSPVTTFSRTLYVAAVLAPGGALALDA 192 Query: 192 DVQERAVYVVRGDVTLDGERMEPGTLAILAPGAAVALKAVGETVFMILGGAPLDGPRFVW 251 + +ERAVY+V GD+T+DG +E +A+LAPGA AL + G M+LGG LDG RF+ Sbjct: 193 EHEERAVYLVDGDLTVDGTPLEAAQMAVLAPGARAALASAGGARAMLLGGDKLDGERFIE 252 Query: 252 WNFVATSREKIEAAKLAWNGRDKSVFPDIPGETEWIPLP 290 WNFVA+SR+ IE AK AW ++ +PGET+WIPLP Sbjct: 253 WNFVASSRDAIERAKRAWAAQEMGT---VPGETDWIPLP 288 >ref|ZP_02504928.1| pirin domain protein [Burkholderia pseudomallei BCC215] Length = 293 Score = 292 bits (747), Expect = 5e-77, Method: Composition-based stats. Identities = 166/281 (59%), Positives = 192/281 (68%), Gaps = 5/281 (1%) Query: 13 RDIG-FPVRRLLPAAAARTVGPFVFFDHMGPVEFDAGTTEGDVRPHPHIGLATVTYLFSG 71 RDIG VRR LPA AARTVGPF+FFDHMGP AG DVR HPHIGLATVTYLF G Sbjct: 14 RDIGNLTVRRTLPALAARTVGPFIFFDHMGPAAQPAGAGL-DVRAHPHIGLATVTYLFDG 72 Query: 72 AMMHRDSLGVVQRITPGAVNWMASGRGIVHSERIPDDIREQKVPVHGLQMWVALPAEQEE 131 A+MHRDSLG Q+I PG VNWM +GRGIVHSER PD+ R + VHG+Q WVALP E E Sbjct: 73 AIMHRDSLGCAQKIVPGDVNWMTAGRGIVHSERTPDEERARGQTVHGIQTWVALPREHEA 132 Query: 132 SEPLFRHYASEDMPEAQIGGARLHVLAGSAFGVSSPVATASPTLYVAGSTTQGAELEIAA 191 EP F H+A +P+ + G L V+AG AFG SPV T S TLYVA G L + A Sbjct: 133 REPSFEHHAGATLPKLERDGVALTVIAGDAFGARSPVTTFSRTLYVAAVFAAGGALALDA 192 Query: 192 DVQERAVYVVRGDVTLDGERMEPGTLAILAPGAAVALKAVGETVFMILGGAPLDGPRFVW 251 D ERAVY+V GD+T+DG +EP +A+LAPGA VAL + G M+LGG LDG RF+ Sbjct: 193 DHDERAVYLVDGDLTIDGAPLEPAQMAVLAPGARVALASAGGARAMLLGGDKLDGERFIE 252 Query: 252 WNFVATSREKIEAAKLAWNGRDKSVFPDIPGETEWIPLPAH 292 WNFVA+SR+ IE AK AW + +PGETEWIP P H Sbjct: 253 WNFVASSRDTIERAKRAWAAQQMGT---VPGETEWIPFPEH 290