BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.4784.p (279 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775948.1| 3',5'-cyclic-nucleotide phosphodiesterase [H... 479 e-133 ref|YP_001619946.1| hypothetical protein sce9293 [Sorangium cell... 292 4e-77 ref|NP_109524.1| 3',5'-cyclic-nucleotide phosphodiesterase CpdA-... 270 2e-70 ref|NP_108257.1| 3',5'-cyclic-nucleotide phosphodiesterase [Meso... 267 1e-69 ref|YP_003448586.1| 3',5'-cyclic-nucleotide phosphodiesterase [A... 215 5e-54 >ref|YP_003775948.1| 3',5'-cyclic-nucleotide phosphodiesterase [Herbaspirillum seropedicae SmR1] gb|ADJ64040.1| 3',5'-cyclic-nucleotide phosphodiesterase protein [Herbaspirillum seropedicae SmR1] Length = 279 Score = 479 bits (1233), Expect = e-133, Method: Composition-based stats. Identities = 257/279 (92%), Positives = 266/279 (95%) Query: 1 MRTLIHLSDLHFGRTDPEIIEPLIAQIHELKPDLVVVSGDLTQRARSIQFKQAREFLNAL 60 MR +IHLSDLHFGRTDP IIEPLIAQIHEL+PDLVVVSGDLTQRARS QF+QAR+FL+AL Sbjct: 1 MRRVIHLSDLHFGRTDPAIIEPLIAQIHELQPDLVVVSGDLTQRARSSQFRQARQFLDAL 60 Query: 61 PQPQLVVPGNHDVPLFNVAARLLQPLRKYKRHITADLQPRYVDEEIAVVGINTARSLTIQ 120 P PQLVVPGNHDVPLFNVAARLLQPLRKYKRHIT DLQP YVD+EIAVVGINTARSLTIQ Sbjct: 61 PTPQLVVPGNHDVPLFNVAARLLQPLRKYKRHITPDLQPLYVDDEIAVVGINTARSLTIQ 120 Query: 121 DGRVNDRQIEHARRELAGVGDHLVKIIVTHHPFDLPPGPQHHGLVGQAVPAMRAFALCGA 180 DGRVNDRQIE ARRELA VGDHLVKIIVTHHPFDLPPGPQHHGLVGQA+PAMRAFALCGA Sbjct: 121 DGRVNDRQIELARRELAAVGDHLVKIIVTHHPFDLPPGPQHHGLVGQALPAMRAFALCGA 180 Query: 181 DLLLAGHVHTSSAVSSAGRYHIPGYSALVVQAGTATSTRGRGESNSFNVLQVEAHQIVVH 240 DLLLAGHVH SSAVSSA RY I GYSALVVQAGTATSTRGRGE+NSFNVLQ+EAHQIVVH Sbjct: 181 DLLLAGHVHASSAVSSAARYRIAGYSALVVQAGTATSTRGRGEANSFNVLQIEAHQIVVH 240 Query: 241 RLGWRAEERAFGLDASQTFVQRGSEWFEQTADGQIATDP 279 RLGWRAEERAFGLDASQTFVQRGSEWFEQ ADGQIATDP Sbjct: 241 RLGWRAEERAFGLDASQTFVQRGSEWFEQLADGQIATDP 279 >ref|YP_001619946.1| hypothetical protein sce9293 [Sorangium cellulosum 'So ce 56'] emb|CAN99466.1| unnamed protein product [Sorangium cellulosum 'So ce 56'] Length = 269 Score = 292 bits (747), Expect = 4e-77, Method: Composition-based stats. Identities = 145/266 (54%), Positives = 194/266 (72%), Gaps = 1/266 (0%) Query: 1 MRTLIHLSDLHFGRTDPEIIEPLIAQIHELKPDLVVVSGDLTQRARSIQFKQAREFLNAL 60 MRTL+HLSDLHFGR D I+ PLI +I L+P +VV+SGDLTQRAR +F +AR FL+AL Sbjct: 1 MRTLVHLSDLHFGRVDKAILRPLIERIGGLEPHVVVISGDLTQRARDAEFAEARAFLDAL 60 Query: 61 PQPQLVVPGNHDVPLFNVAARLLQPLRKYKRHITADLQPRYVDEEIAVVGINTARSLTIQ 120 P P++VVPGNHDVPL+N+ R +PL +Y+ HIT DL P ++D EIAV+GINTARSLTI+ Sbjct: 61 PSPRIVVPGNHDVPLYNLFDRFFRPLDRYRSHITDDLSPFHLDAEIAVLGINTARSLTIK 120 Query: 121 DGRVNDRQIEHARRELAGVGDHLVKIIVTHHPFDLPPGPQHHGLVGQAVPAMRAFALCGA 180 DGR+N RQ+E + + +G + KI+VTHHPFDLP H +VG+A AM A A CG Sbjct: 121 DGRINARQVEGIKARMCDLGPEITKIVVTHHPFDLPENSP-HAIVGRARQAMAAIAGCGV 179 Query: 181 DLLLAGHVHTSSAVSSAGRYHIPGYSALVVQAGTATSTRGRGESNSFNVLQVEAHQIVVH 240 D++L+GH+H S SA R+ G+S+L+VQAGTATSTRGRGE N+FNV++V+ +I + Sbjct: 180 DVILSGHLHMSHTGHSAERFDAGGHSSLIVQAGTATSTRGRGEQNAFNVIRVDGRKIHIE 239 Query: 241 RLGWRAEERAFGLDASQTFVQRGSEW 266 R W+ E+ FG+ ++ F + W Sbjct: 240 RYFWQPEDGLFGIAITEHFEETSRGW 265 >ref|NP_109524.1| 3',5'-cyclic-nucleotide phosphodiesterase CpdA-like protein [Mesorhizobium loti MAFF303099] dbj|BAB54863.1| 3',5'-cyclic-nucleotide phosphodiesterase CpdA homolog [Mesorhizobium loti MAFF303099] Length = 269 Score = 270 bits (690), Expect = 2e-70, Method: Composition-based stats. Identities = 136/266 (51%), Positives = 189/266 (71%) Query: 1 MRTLIHLSDLHFGRTDPEIIEPLIAQIHELKPDLVVVSGDLTQRARSIQFKQAREFLNAL 60 M+TL+HLSDLHFG+T+ ++++ + A++ + DL+VVSGDLTQRAR +F QAR FL++L Sbjct: 1 MKTLVHLSDLHFGKTESQLVDAIAAEVRAVDSDLLVVSGDLTQRARKDEFLQARAFLDSL 60 Query: 61 PQPQLVVPGNHDVPLFNVAARLLQPLRKYKRHITADLQPRYVDEEIAVVGINTARSLTIQ 120 P P++VVPGNHDVPL+NV AR + PL +Y+R+I AD P Y D E+AVVGINTARSLTI+ Sbjct: 61 PGPRIVVPGNHDVPLWNVFARAMTPLSRYRRYIEADTDPFYADSEVAVVGINTARSLTIK 120 Query: 121 DGRVNDRQIEHARRELAGVGDHLVKIIVTHHPFDLPPGPQHHGLVGQAVPAMRAFALCGA 180 DGR+N RQ++ A + A + D + +I+VTHHPF+ G+VG+A AM AF+ G Sbjct: 121 DGRINVRQLKAATEKFAHMSDDITRIVVTHHPFEGRDLESDDGIVGRADLAMHAFSRSGV 180 Query: 181 DLLLAGHVHTSSAVSSAGRYHIPGYSALVVQAGTATSTRGRGESNSFNVLQVEAHQIVVH 240 D++L+GH H A SSA RY I GY+AL++QAGTA S+R R +NSFN++++E +I V Sbjct: 181 DIILSGHQHLHRAGSSARRYLIDGYAALLIQAGTAVSSRLRRAANSFNIIRIEHPRISVE 240 Query: 241 RLGWRAEERAFGLDASQTFVQRGSEW 266 W+ + F AS +F Q W Sbjct: 241 CRAWQPSQSGFETSASYSFRQGPGGW 266 >ref|NP_108257.1| 3',5'-cyclic-nucleotide phosphodiesterase [Mesorhizobium loti MAFF303099] dbj|BAB53718.1| 3',5'-cyclic-nucleotide phosphodiesterase [Mesorhizobium loti MAFF303099] Length = 269 Score = 267 bits (683), Expect = 1e-69, Method: Composition-based stats. Identities = 134/266 (50%), Positives = 188/266 (70%) Query: 1 MRTLIHLSDLHFGRTDPEIIEPLIAQIHELKPDLVVVSGDLTQRARSIQFKQAREFLNAL 60 M+TL+HLSDLHFG+T+ +++ + A++ + DL+VVSGDLTQRAR +F QAR FL++L Sbjct: 1 MKTLVHLSDLHFGKTESHLVDAIAAEVRAVDSDLLVVSGDLTQRARKDEFLQARAFLDSL 60 Query: 61 PQPQLVVPGNHDVPLFNVAARLLQPLRKYKRHITADLQPRYVDEEIAVVGINTARSLTIQ 120 P P++VVPGNHDVPL+NV AR + PL +Y+R+I AD P Y D E+AVVGINTARSLTI+ Sbjct: 61 PGPRIVVPGNHDVPLWNVFARAMTPLSRYRRYIEADTDPFYADSEVAVVGINTARSLTIK 120 Query: 121 DGRVNDRQIEHARRELAGVGDHLVKIIVTHHPFDLPPGPQHHGLVGQAVPAMRAFALCGA 180 +GR+N RQ++ A + A + D + +I+VTHHPF+ G+V +A AM AF+ G Sbjct: 121 NGRINVRQLKAATEKFAYMSDDITRIVVTHHPFEGLDLESDDGIVARADLAMDAFSRSGV 180 Query: 181 DLLLAGHVHTSSAVSSAGRYHIPGYSALVVQAGTATSTRGRGESNSFNVLQVEAHQIVVH 240 D++L+GH H A SSA RY I GY+AL+VQAGTA S+R R +NSFN++++E +I + Sbjct: 181 DIILSGHQHLHRAGSSARRYLIDGYAALLVQAGTAVSSRVRQAANSFNIIRIEHPRISIE 240 Query: 241 RLGWRAEERAFGLDASQTFVQRGSEW 266 W++ + F AS +F Q W Sbjct: 241 CRAWQSLQSGFETSASYSFRQGSGGW 266 >ref|YP_003448586.1| 3',5'-cyclic-nucleotide phosphodiesterase [Azospirillum sp. B510] dbj|BAI72042.1| 3',5'-cyclic-nucleotide phosphodiesterase [Azospirillum sp. B510] Length = 291 Score = 215 bits (548), Expect = 5e-54, Method: Composition-based stats. Identities = 117/289 (40%), Positives = 167/289 (57%), Gaps = 12/289 (4%) Query: 1 MRTLIHLSDLHFGRTDPEIIEPLIAQIHELKPDLVVVSGDLTQRARSIQFKQAREFLNAL 60 M+ L H+SDLHFGR DP +++ L++ + PDL+V+SGD QRA+ F++AR FL L Sbjct: 1 MKRLAHISDLHFGRIDPRVVDGLLSDLTAQAPDLIVISGDFVQRAKPRHFEEARAFLRKL 60 Query: 61 PQPQLVVPGNHDVPLFNVAARLLQPLRKYKRHITADLQPRYVDEEIAVVGINTARSLTI- 119 P P + VPGNHD+P++NV R P Y+ +IT DL P ++D+E+AV+GINTAR + + Sbjct: 61 PFPYMAVPGNHDIPVYNVFRRFTDPFGHYRTYITNDLSPLHIDDELAVLGINTARPVIMD 120 Query: 120 -QDGRVNDRQIEHARRELAGVGDHLVKIIVTHHPFDLPPGPQHHGLVGQAVPAMRAFALC 178 +GR+N RQI R G+ + + K++ THHPF PP LVG+ + A C Sbjct: 121 FSEGRMNRRQITRVREVFCGMPETVFKVLFTHHPFLPPPDLPRTQLVGRHKLVLPALESC 180 Query: 179 GADLLLAGHVHTSSAVSSAGRYHIPGYSALVVQAGTATSTRGRGESNSFNVLQVEAHQIV 238 G DLLLAGH+H + + + S LV QA TATSTR R E+N++N++ V + Sbjct: 181 GVDLLLAGHLHKAYSGDIMSFHTQVARSILVAQASTATSTRLRNEANAYNLITVAHPTVT 240 Query: 239 VHRLGWRAEERAFGLDASQTFVQRGSEW--------FEQTADGQIATDP 279 W A GL +S + + G+ W F DGQ + DP Sbjct: 241 FEVRSWEGAAFAGGLVSS--YRKAGNRWTLQAQDTGFRPVGDGQASGDP 287