BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.4780.p (404 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775951.1| CobW/P47K family protein [Herbaspirillum ser... 740 0.0 ref|YP_001564666.1| cobalamin synthesis protein P47K [Delftia ac... 623 e-176 ref|YP_371076.1| cobalamin synthesis protein/P47K [Burkholderia ... 621 e-176 ref|YP_004488511.1| cobalamin synthesis protein P47K [Delftia sp... 620 e-175 ref|YP_622903.1| cobalamin synthesis protein, P47K [Burkholderia... 617 e-174 >ref|YP_003775951.1| CobW/P47K family protein [Herbaspirillum seropedicae SmR1] gb|ADJ64043.1| CobW/P47K family protein [Herbaspirillum seropedicae SmR1] Length = 404 Score = 740 bits (1910), Expect = 0.0, Method: Composition-based stats. Identities = 362/403 (89%), Positives = 386/403 (95%) Query: 1 MTSLQRQPGDRRLPVTVLSGFLGAGKTTLLNHILHNREGRRVAVIVNDMSEVNIDAALVR 60 MTS QRQ DRRLPVTVLSGFLGAGKTTLLNHILHNREGRRVAVIVNDMSEVNIDAALVR Sbjct: 1 MTSSQRQAADRRLPVTVLSGFLGAGKTTLLNHILHNREGRRVAVIVNDMSEVNIDAALVR 60 Query: 61 DGGADLSRTEEKLVEMSNGCICCTLREDLLMEVRKLARERRFDQLVIESTGISEPLPVAE 120 DGGADL+RTEEKLVEMSNGCICCTLREDLLMEVRKLARERRFDQLVIESTGISEPLPVAE Sbjct: 61 DGGADLARTEEKLVEMSNGCICCTLREDLLMEVRKLARERRFDQLVIESTGISEPLPVAE 120 Query: 121 TFTFTDEEGASLADVARLDTMVTVVDAFNFLKDYSSQDSLQERGESMGEEDSRTVVDLLI 180 TFTFTDE+GASL+DVARLDTMVTVVDAFNFLKDYSSQDSL +RG+SMGEED+RTVVDLLI Sbjct: 121 TFTFTDEDGASLSDVARLDTMVTVVDAFNFLKDYSSQDSLDQRGQSMGEEDNRTVVDLLI 180 Query: 181 EQIEFCDVIVLNKLDLVSPLDLERLHAILHKLNPRARIVTSEFGKVALDQVLNTGLFDFE 240 EQIEFCDVIVLNKLDLV+ DLERLHAILHKLNPRARIV +EFGKVAL+QVL+TGLFDFE Sbjct: 181 EQIEFCDVIVLNKLDLVAADDLERLHAILHKLNPRARIVRAEFGKVALEQVLDTGLFDFE 240 Query: 241 QASQAPGWLQELRGEHVPETEQYGITSFAWRARRPMHPQRFFDLVNSEWPGVVRSKGFFW 300 QASQAP WLQELRGEHVPETEQYGI+SFAW+ARRP+HPQRFFDL+N+EWPGVVRSKGFFW Sbjct: 241 QASQAPSWLQELRGEHVPETEQYGISSFAWQARRPLHPQRFFDLINTEWPGVVRSKGFFW 300 Query: 301 LATRPAHAGSWSQAGAVCRHGLAGKWWAAVPREKWPQDQESIDFILEQWDDNVGDARQEL 360 LA+RP AGSWSQAGAVCRHGLAGKWWAAVPRE+WPQDQES+DFIL WD+NVGDARQEL Sbjct: 301 LASRPTQAGSWSQAGAVCRHGLAGKWWAAVPREQWPQDQESVDFILAHWDENVGDARQEL 360 Query: 361 VLIGMEMNQAALTAKLEACLLTDAEMAQGPMGWARMADPFPGW 403 VLIGM M+Q AL A+L+ACLL+DAEMAQGP+GWARM DPFP W Sbjct: 361 VLIGMAMDQEALRARLDACLLSDAEMAQGPLGWARMRDPFPLW 403 >ref|YP_001564666.1| cobalamin synthesis protein P47K [Delftia acidovorans SPH-1] gb|ABX36281.1| cobalamin synthesis protein P47K [Delftia acidovorans SPH-1] Length = 423 Score = 623 bits (1607), Expect = e-176, Method: Composition-based stats. Identities = 307/397 (77%), Positives = 342/397 (86%) Query: 7 QPGDRRLPVTVLSGFLGAGKTTLLNHILHNREGRRVAVIVNDMSEVNIDAALVRDGGADL 66 QP RLPVTVLSGFLGAGKTTLLNHILHNREGRRVAVIVNDMSEVNIDAALVRDGGA L Sbjct: 26 QPPHARLPVTVLSGFLGAGKTTLLNHILHNREGRRVAVIVNDMSEVNIDAALVRDGGAGL 85 Query: 67 SRTEEKLVEMSNGCICCTLREDLLMEVRKLARERRFDQLVIESTGISEPLPVAETFTFTD 126 SRT+EKLVEMSNGCICCTLREDLL+EV +LA E RFDQLVIESTGISEPLPVAETFTF Sbjct: 86 SRTDEKLVEMSNGCICCTLREDLLLEVARLAGEGRFDQLVIESTGISEPLPVAETFTFAG 145 Query: 127 EEGASLADVARLDTMVTVVDAFNFLKDYSSQDSLQERGESMGEEDSRTVVDLLIEQIEFC 186 E+G SL DVARLDTMVTVVDAFNFL DY S+DSL+ RGES+GEED RTVVDLLIEQ+EFC Sbjct: 146 EDGRSLGDVARLDTMVTVVDAFNFLHDYGSRDSLRSRGESLGEEDRRTVVDLLIEQVEFC 205 Query: 187 DVIVLNKLDLVSPLDLERLHAILHKLNPRARIVTSEFGKVALDQVLNTGLFDFEQASQAP 246 DVIVLNK+DLV+ D RL AIL LNPRAR+ + FG++ LD+VL+TGLFDFE+AS+AP Sbjct: 206 DVIVLNKIDLVTDEDCSRLMAILRGLNPRARLEAASFGQLPLDRVLDTGLFDFEEASRAP 265 Query: 247 GWLQELRGEHVPETEQYGITSFAWRARRPMHPQRFFDLVNSEWPGVVRSKGFFWLATRPA 306 GWLQ+LRG H PETE YG+ SF +RARRP HP+RFF LV SEWPGVVRSKGFFWLA+ PA Sbjct: 266 GWLQQLRGTHQPETEAYGVASFVYRARRPFHPRRFFGLVQSEWPGVVRSKGFFWLASHPA 325 Query: 307 HAGSWSQAGAVCRHGLAGKWWAAVPREKWPQDQESIDFILEQWDDNVGDARQELVLIGME 366 AGSWSQAGAV RHG AG WWAAV E+WP+D ES++ IL++W D VGDARQELVLIGM Sbjct: 326 LAGSWSQAGAVARHGPAGHWWAAVEAERWPRDPESVERILDKWVDGVGDARQELVLIGMG 385 Query: 367 MNQAALTAKLEACLLTDAEMAQGPMGWARMADPFPGW 403 M++ AL A+L+ CLLTDAEMA GP W + +PFPGW Sbjct: 386 MDEQALRARLDECLLTDAEMAMGPQAWTQWDNPFPGW 422 >ref|YP_371076.1| cobalamin synthesis protein/P47K [Burkholderia sp. 383] gb|ABB10432.1| Cobalamin synthesis protein/P47K [Burkholderia sp. 383] Length = 423 Score = 621 bits (1602), Expect = e-176, Method: Composition-based stats. Identities = 307/396 (77%), Positives = 343/396 (86%) Query: 8 PGDRRLPVTVLSGFLGAGKTTLLNHILHNREGRRVAVIVNDMSEVNIDAALVRDGGADLS 67 P RLPVTVLSGFLGAGKTTLLNHIL+NREGRRVAVIVNDMSEVNIDAALVRDGGA LS Sbjct: 27 PPSTRLPVTVLSGFLGAGKTTLLNHILNNREGRRVAVIVNDMSEVNIDAALVRDGGAGLS 86 Query: 68 RTEEKLVEMSNGCICCTLREDLLMEVRKLARERRFDQLVIESTGISEPLPVAETFTFTDE 127 RT+EKLVEMSNGCICCTLREDLL+EV +LARE RFDQLVIESTGISEPLPVAETFTF E Sbjct: 87 RTDEKLVEMSNGCICCTLREDLLIEVDRLAREGRFDQLVIESTGISEPLPVAETFTFEGE 146 Query: 128 EGASLADVARLDTMVTVVDAFNFLKDYSSQDSLQERGESMGEEDSRTVVDLLIEQIEFCD 187 +G SL +VARLDTMVTVVDAFNFL+DY+S+DSLQ RGESMGEED+RTVVDLLI+QIEFCD Sbjct: 147 DGRSLGEVARLDTMVTVVDAFNFLRDYASRDSLQSRGESMGEEDARTVVDLLIDQIEFCD 206 Query: 188 VIVLNKLDLVSPLDLERLHAILHKLNPRARIVTSEFGKVALDQVLNTGLFDFEQASQAPG 247 VIV+NK+DL+ ERL A+L LNPRARI +EFGKV L++VL+TGLFDFE AS+APG Sbjct: 207 VIVINKIDLIDASARERLVALLRGLNPRARIEIAEFGKVPLERVLDTGLFDFEAASRAPG 266 Query: 248 WLQELRGEHVPETEQYGITSFAWRARRPMHPQRFFDLVNSEWPGVVRSKGFFWLATRPAH 307 WLQE+RG H PET++YGI SF +RARRP HPQRFFDLV SEWPGVVRSKGFFWLAT P Sbjct: 267 WLQEMRGTHTPETDEYGIRSFVYRARRPFHPQRFFDLVESEWPGVVRSKGFFWLATHPTV 326 Query: 308 AGSWSQAGAVCRHGLAGKWWAAVPREKWPQDQESIDFILEQWDDNVGDARQELVLIGMEM 367 AGSWSQAGAV RHG AG WWAAVP E+WPQD E++ I +WD++VGDARQELVLIGM+M Sbjct: 327 AGSWSQAGAVARHGPAGHWWAAVPPERWPQDAEAVAQIRARWDEHVGDARQELVLIGMDM 386 Query: 368 NQAALTAKLEACLLTDAEMAQGPMGWARMADPFPGW 403 ++ AL A+ +ACLLTDAEMA GP W +PF W Sbjct: 387 DEPALRARFDACLLTDAEMATGPEHWTTWDNPFRDW 422 >ref|YP_004488511.1| cobalamin synthesis protein P47K [Delftia sp. Cs1-4] gb|AEF90156.1| cobalamin synthesis protein P47K [Delftia sp. Cs1-4] Length = 406 Score = 620 bits (1598), Expect = e-175, Method: Composition-based stats. Identities = 307/397 (77%), Positives = 342/397 (86%) Query: 7 QPGDRRLPVTVLSGFLGAGKTTLLNHILHNREGRRVAVIVNDMSEVNIDAALVRDGGADL 66 QP RLPVTVLSGFLGAGKTTLLNHILHNREGRRVAVIVNDMSEVNIDAALVRDGGA L Sbjct: 9 QPPHARLPVTVLSGFLGAGKTTLLNHILHNREGRRVAVIVNDMSEVNIDAALVRDGGAGL 68 Query: 67 SRTEEKLVEMSNGCICCTLREDLLMEVRKLARERRFDQLVIESTGISEPLPVAETFTFTD 126 SRT+EKLVEMSNGCICCTLREDLL+EV +LA E RFDQLVIESTGISEPLPVAETFTF Sbjct: 69 SRTDEKLVEMSNGCICCTLREDLLLEVARLAGEGRFDQLVIESTGISEPLPVAETFTFAG 128 Query: 127 EEGASLADVARLDTMVTVVDAFNFLKDYSSQDSLQERGESMGEEDSRTVVDLLIEQIEFC 186 E+G SL DVARLDTMVTVVDAFNFL DY S+DSL+ RGES+GEED RTVVDLLIEQ+EFC Sbjct: 129 EDGRSLGDVARLDTMVTVVDAFNFLHDYGSRDSLRSRGESLGEEDRRTVVDLLIEQVEFC 188 Query: 187 DVIVLNKLDLVSPLDLERLHAILHKLNPRARIVTSEFGKVALDQVLNTGLFDFEQASQAP 246 DVIVLNK+DLV+ D RL AIL LNPRAR+ + FG++ LD+VL+TGLFDFE+AS+AP Sbjct: 189 DVIVLNKIDLVTEEDCTRLMAILRGLNPRARLEIASFGQLPLDRVLDTGLFDFEEASRAP 248 Query: 247 GWLQELRGEHVPETEQYGITSFAWRARRPMHPQRFFDLVNSEWPGVVRSKGFFWLATRPA 306 GWLQ+LRG H PETE YG+ SF +RARRP HP+RFF LV SEWPGVVRSKGFFWLA+ PA Sbjct: 249 GWLQQLRGTHQPETEAYGVASFVYRARRPFHPRRFFGLVQSEWPGVVRSKGFFWLASHPA 308 Query: 307 HAGSWSQAGAVCRHGLAGKWWAAVPREKWPQDQESIDFILEQWDDNVGDARQELVLIGME 366 AGSWSQAGAV RHG AG WWAAV E+WP+D ES++ IL++W D VGDARQELVLIGM Sbjct: 309 LAGSWSQAGAVARHGPAGHWWAAVEAERWPRDPESVERILDKWVDGVGDARQELVLIGMG 368 Query: 367 MNQAALTAKLEACLLTDAEMAQGPMGWARMADPFPGW 403 M++ AL A+L+ CLLTDAEMA GP WA+ +PFP W Sbjct: 369 MDEDALRARLDECLLTDAEMALGPQAWAQWDNPFPDW 405 >ref|YP_622903.1| cobalamin synthesis protein, P47K [Burkholderia cenocepacia AU 1054] ref|YP_838958.1| cobalamin synthesis protein, P47K [Burkholderia cenocepacia HI2424] gb|ABF77930.1| cobalamin synthesis protein, P47K [Burkholderia cenocepacia AU 1054] gb|ABK12065.1| cobalamin synthesis protein, P47K [Burkholderia cenocepacia HI2424] Length = 423 Score = 617 bits (1590), Expect = e-174, Method: Composition-based stats. Identities = 303/392 (77%), Positives = 342/392 (87%) Query: 12 RLPVTVLSGFLGAGKTTLLNHILHNREGRRVAVIVNDMSEVNIDAALVRDGGADLSRTEE 71 RLPVTVLSGFLGAGKTTLLNHIL+NREGRRVAVIVNDMSEVNIDAALVRDGGA LSRT+E Sbjct: 31 RLPVTVLSGFLGAGKTTLLNHILNNREGRRVAVIVNDMSEVNIDAALVRDGGAGLSRTDE 90 Query: 72 KLVEMSNGCICCTLREDLLMEVRKLARERRFDQLVIESTGISEPLPVAETFTFTDEEGAS 131 KLVEMSNGCICCTLREDLL+EV +LARE RFDQLVIESTGISEPLPVAETFTF E+G S Sbjct: 91 KLVEMSNGCICCTLREDLLIEVDRLAREGRFDQLVIESTGISEPLPVAETFTFEGEDGRS 150 Query: 132 LADVARLDTMVTVVDAFNFLKDYSSQDSLQERGESMGEEDSRTVVDLLIEQIEFCDVIVL 191 L +VARLDTMVTVVDAFNFL+DY+S+DSLQ RGESMG+ED+RTVVDLLI+QIEFCDV+V+ Sbjct: 151 LGEVARLDTMVTVVDAFNFLRDYASRDSLQARGESMGDEDARTVVDLLIDQIEFCDVLVI 210 Query: 192 NKLDLVSPLDLERLHAILHKLNPRARIVTSEFGKVALDQVLNTGLFDFEQASQAPGWLQE 251 NK+DL+ ERL A+L LNPRARI +EFGKV L++VL+TGLFDF+ AS+APGWLQE Sbjct: 211 NKIDLIDASARERLIALLRGLNPRARIEIAEFGKVPLERVLDTGLFDFDAASRAPGWLQE 270 Query: 252 LRGEHVPETEQYGITSFAWRARRPMHPQRFFDLVNSEWPGVVRSKGFFWLATRPAHAGSW 311 LRG H PET++YGI SF +RARRP HPQRFFDLV SEWPGVVRSKGFFWLAT P AGSW Sbjct: 271 LRGTHTPETDEYGIRSFVYRARRPFHPQRFFDLVESEWPGVVRSKGFFWLATHPTVAGSW 330 Query: 312 SQAGAVCRHGLAGKWWAAVPREKWPQDQESIDFILEQWDDNVGDARQELVLIGMEMNQAA 371 SQAGAV RHG AG WWAAVP E+WP+D E++ I +WD++VGDARQELVLIGM+M++ A Sbjct: 331 SQAGAVARHGPAGHWWAAVPPERWPRDAEAVAQIRARWDEHVGDARQELVLIGMDMDEPA 390 Query: 372 LTAKLEACLLTDAEMAQGPMGWARMADPFPGW 403 L A+ +ACLLTDAEMA GP W +PF W Sbjct: 391 LRARFDACLLTDAEMAAGPEHWTTWDNPFRDW 422