BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.4779.p (308 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775952.1| hypothetical protein Hsero_2545 [Herbaspiril... 365 4e-99 ref|ZP_03399398.1| conserved hypothetical protein [Pseudomonas s... 275 5e-72 gb|EGH94572.1| putative GTP cyclohydrolase [Pseudomonas syringae... 273 2e-71 gb|EGH46098.1| putative GTP cyclohydrolase [Pseudomonas syringae... 271 1e-70 ref|YP_001564667.1| putative GTP cyclohydrolase [Delftia acidovo... 271 1e-70 >ref|YP_003775952.1| hypothetical protein Hsero_2545 [Herbaspirillum seropedicae SmR1] gb|ADJ64044.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1] Length = 303 Score = 365 bits (938), Expect = 4e-99, Method: Composition-based stats. Identities = 220/300 (73%), Positives = 246/300 (82%) Query: 9 SLPDVARDEPASIALPLQWVGMCGIALPLRLADGTQLPASAEVAVDLPDPQAKGIHMSRL 68 +LPDVAR+E ASIALPL WVGMCGIALP+RL +G +PASAE+AVDLP QAKGIHMSRL Sbjct: 4 ALPDVAREERASIALPLDWVGMCGIALPVRLDNGQIVPASAEIAVDLPHAQAKGIHMSRL 63 Query: 69 YLLLDAFASRSRLTPTAAHELLRQMRESHADCQSRAALLRLDFALLQQRAALVTPELAGW 128 YLLLD FA+++ L P A H LL QMR SHADC SRAA LRLDFALL QRAALVTP LAGW Sbjct: 64 YLLLDRFAAQATLNPAALHALLDQMRASHADCGSRAASLRLDFALLHQRAALVTPALAGW 123 Query: 129 KSYPVTLTAQLRDSTLEIRLQVRIAYSSTCPCSAALSRQALQDAFAQAFAGQPAIEREAA 188 KSYP TL A+L+ L + LQVRIAYSSTCPCSAALSRQALQDAFA F ++ + A Sbjct: 124 KSYPFTLAAELQQDRLHLTLQVRIAYSSTCPCSAALSRQALQDAFASEFGPHTSVAQPAV 183 Query: 189 LAWLQRNASLATPHSQRSEAELSINVSPKAEQLPIAALIDTAEAALGTAVQTAVRRADEQ 248 L WL R+ S ATPHSQRS A+L + V+ +A +LP+ ALIDTAE ALGTAVQTAVRRADEQ Sbjct: 184 LDWLARHGSRATPHSQRSYADLGVTVAQEAAELPLLALIDTAEQALGTAVQTAVRRADEQ 243 Query: 249 AFALANGANLMYVEDAARRLRQALEARFAACSVRVSHFESLHAHDAVATAMTPGWQELLR 308 AFALANGANLMYVEDAARRLRQA+EARF AC++RVSH ESLHAHDAVA +PGW LR Sbjct: 244 AFALANGANLMYVEDAARRLRQAVEARFGACAIRVSHVESLHAHDAVAATASPGWSGQLR 303 >ref|ZP_03399398.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1] ref|ZP_07233470.1| putative GTP cyclohydrolase [Pseudomonas syringae pv. tomato Max13] ref|ZP_07250672.1| putative GTP cyclohydrolase [Pseudomonas syringae pv. tomato K40] ref|ZP_07257443.1| putative GTP cyclohydrolase [Pseudomonas syringae pv. tomato NCPPB 1108] gb|EEB57506.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1] Length = 301 Score = 275 bits (704), Expect = 5e-72, Method: Composition-based stats. Identities = 164/290 (56%), Positives = 194/290 (66%), Gaps = 3/290 (1%) Query: 10 LPDVARDEPASIALPLQWVGMCGIALPLRLAD-GTQLP--ASAEVAVDLPDPQAKGIHMS 66 LPDVA E +S + L WVGM G+ +PL L + G P A A++ VDL DP KGIHMS Sbjct: 5 LPDVALTEVSSALIALDWVGMQGVEVPLTLGEPGATHPVHAYADLQVDLTDPSVKGIHMS 64 Query: 67 RLYLLLDAFASRSRLTPTAAHELLRQMRESHADCQSRAALLRLDFALLQQRAALVTPELA 126 RLY LLD FA LTP LL M ESH DC S A + L F LL +R ALVT L+ Sbjct: 65 RLYRLLDGFAEHQVLTPETLSALLEAMVESHVDCHSSGARITLTFNLLCRRPALVTEGLS 124 Query: 127 GWKSYPVTLTAQLRDSTLEIRLQVRIAYSSTCPCSAALSRQALQDAFAQAFAGQPAIERE 186 GWKSYPV L A R L + + I YSSTCPCSAALSRQ L++AF +F Q ++ Sbjct: 125 GWKSYPVKLEAVWRAGRLCLDVSADITYSSTCPCSAALSRQLLEEAFVASFGRQSFVDPM 184 Query: 187 AALAWLQRNASLATPHSQRSEAELSINVSPKAEQLPIAALIDTAEAALGTAVQTAVRRAD 246 AWL+ NAS ATPHSQRS A + + V+ +A ++ + ALIDT E ALGT VQTAV+RAD Sbjct: 185 QVAAWLRENASYATPHSQRSVATVQVRVAEQATEMGLMALIDTVEQALGTPVQTAVKRAD 244 Query: 247 EQAFALANGANLMYVEDAARRLRQALEARFAACSVRVSHFESLHAHDAVA 296 EQAFA NG NLMYVEDAAR+++QALE R+ A SV V HFESLH HDA A Sbjct: 245 EQAFARLNGQNLMYVEDAARKIQQALEGRYPASSVSVRHFESLHPHDAAA 294 >gb|EGH94572.1| putative GTP cyclohydrolase [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 301 Score = 273 bits (699), Expect = 2e-71, Method: Composition-based stats. Identities = 164/290 (56%), Positives = 193/290 (66%), Gaps = 3/290 (1%) Query: 10 LPDVARDEPASIALPLQWVGMCGIALPLRLAD-GTQLP--ASAEVAVDLPDPQAKGIHMS 66 LPDVA E +S + L WVGM G+ +PL L + G P A A++ VDL DP KGIHMS Sbjct: 5 LPDVALTEVSSALIALDWVGMQGVEVPLTLGEPGATHPVHAYADLQVDLTDPSVKGIHMS 64 Query: 67 RLYLLLDAFASRSRLTPTAAHELLRQMRESHADCQSRAALLRLDFALLQQRAALVTPELA 126 RLY LLD FA LTP LL M ESH DC S A + L F LL +R ALVT L+ Sbjct: 65 RLYRLLDGFAEHQVLTPETLSALLEAMVESHVDCHSSGARITLTFNLLCRRPALVTEGLS 124 Query: 127 GWKSYPVTLTAQLRDSTLEIRLQVRIAYSSTCPCSAALSRQALQDAFAQAFAGQPAIERE 186 GWKSYPV L A R L + + I YSSTCPCSAALSRQ L++AF F Q ++ Sbjct: 125 GWKSYPVKLEAVWRAGRLCLDVSADITYSSTCPCSAALSRQLLEEAFVARFGRQSFVDPM 184 Query: 187 AALAWLQRNASLATPHSQRSEAELSINVSPKAEQLPIAALIDTAEAALGTAVQTAVRRAD 246 AWL+ NAS ATPHSQRS A + + V+ +A ++ + ALIDT E ALGT VQTAV+RAD Sbjct: 185 QVAAWLRENASYATPHSQRSVATVQVRVAEQATEMGLMALIDTVEQALGTPVQTAVKRAD 244 Query: 247 EQAFALANGANLMYVEDAARRLRQALEARFAACSVRVSHFESLHAHDAVA 296 EQAFA NG NLMYVEDAAR+++QALE R+ A SV V HFESLH HDA A Sbjct: 245 EQAFARLNGQNLMYVEDAARKIQQALEGRYPASSVSVRHFESLHPHDAAA 294 >gb|EGH46098.1| putative GTP cyclohydrolase [Pseudomonas syringae pv. pisi str. 1704B] Length = 301 Score = 271 bits (693), Expect = 1e-70, Method: Composition-based stats. Identities = 161/290 (55%), Positives = 196/290 (67%), Gaps = 3/290 (1%) Query: 10 LPDVARDEPASIALPLQWVGMCGIALPLRLADGT---QLPASAEVAVDLPDPQAKGIHMS 66 LPDVA E + + L WVGM G+ +P+RLA+ + + A ++ VDL DP KGIHMS Sbjct: 5 LPDVALTEISPALVSLDWVGMQGVEVPIRLAEASIRHPVHAHVDLQVDLADPSVKGIHMS 64 Query: 67 RLYLLLDAFASRSRLTPTAAHELLRQMRESHADCQSRAALLRLDFALLQQRAALVTPELA 126 RLY LLD +A R ++P LL M ESH DC S A L+L F LL +R AL+T L+ Sbjct: 65 RLYRLLDGYAERQIVSPDTLAALLEAMVESHLDCHSSHARLKLSFNLLCRRPALITEGLS 124 Query: 127 GWKSYPVTLTAQLRDSTLEIRLQVRIAYSSTCPCSAALSRQALQDAFAQAFAGQPAIERE 186 GWKSYPVTL A L + V + YSSTCPCSAALSRQ L++AFA F Q ++ Sbjct: 125 GWKSYPVTLDATWHAGRLCLDSSVDVTYSSTCPCSAALSRQLLEEAFAARFGRQSFVDPM 184 Query: 187 AALAWLQRNASLATPHSQRSEAELSINVSPKAEQLPIAALIDTAEAALGTAVQTAVRRAD 246 AWL+ NASLATPHSQRS A + + V+ +A +L + LID E ALGT VQTAV+RAD Sbjct: 185 QVAAWLRENASLATPHSQRSVATVQVRVAEQATELGLMTLIDLVEQALGTPVQTAVKRAD 244 Query: 247 EQAFALANGANLMYVEDAARRLRQALEARFAACSVRVSHFESLHAHDAVA 296 EQAFA NG NLMYVEDAAR+++QALE R+AA SV V HFESLH HDA A Sbjct: 245 EQAFARLNGQNLMYVEDAARKVQQALEGRYAASSVSVRHFESLHPHDAAA 294 >ref|YP_001564667.1| putative GTP cyclohydrolase [Delftia acidovorans SPH-1] sp|A9C020|GCH4_DELAS RecName: Full=GTP cyclohydrolase folE2 gb|ABX36282.1| protein of unknown function DUF198 [Delftia acidovorans SPH-1] Length = 296 Score = 271 bits (692), Expect = 1e-70, Method: Composition-based stats. Identities = 165/292 (56%), Positives = 202/292 (69%), Gaps = 3/292 (1%) Query: 10 LPDVARDEPASIALPLQWVGMCGIALPLRLADG---TQLPASAEVAVDLPDPQAKGIHMS 66 LPDV+ +PA PLQWVGM GI LP+ +A+ +L A A+V VDLP KGIHMS Sbjct: 5 LPDVSLTDPAPSLSPLQWVGMQGIDLPVTVAEPGYWRELHARADVQVDLPAAHVKGIHMS 64 Query: 67 RLYLLLDAFASRSRLTPTAAHELLRQMRESHADCQSRAALLRLDFALLQQRAALVTPELA 126 RLY LD+ A S L+ A L+ M +SH DCQSR+A +RL LL QR ALVT +L+ Sbjct: 65 RLYRQLDSLAEESALSALALRHALQAMIDSHLDCQSRSARMRLSLDLLAQRPALVTHDLS 124 Query: 127 GWKSYPVTLTAQLRDSTLEIRLQVRIAYSSTCPCSAALSRQALQDAFAQAFAGQPAIERE 186 GWKSYPV L A L ++RLQV + YSSTCPCSAALSRQ L+ F QAFAG+P +E + Sbjct: 125 GWKSYPVRLDATLAQGVFQLRLQVGVGYSSTCPCSAALSRQLLEQGFLQAFAGEPLVEPD 184 Query: 187 AALAWLQRNASLATPHSQRSEAELSINVSPKAEQLPIAALIDTAEAALGTAVQTAVRRAD 246 +WL+R+ +LAT HSQRSEA++S++++ A L I LI E ALGT VQTAV+RAD Sbjct: 185 QVASWLRRHGTLATAHSQRSEAQVSVDLACDAPDLGILPLIARVEQALGTPVQTAVKRAD 244 Query: 247 EQAFALANGANLMYVEDAARRLRQALEARFAACSVRVSHFESLHAHDAVATA 298 EQAFA NG NLM+VEDAARR++ ALE +A V V H ESLH HDAVA A Sbjct: 245 EQAFAALNGRNLMFVEDAARRIQAALEGIYARPRVHVRHMESLHPHDAVAWA 296