BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.4771.p (386 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775957.1| acyl-CoA dehydrogenase [Herbaspirillum serop... 685 0.0 ref|YP_004751208.1| branched-chain acyl-CoA dehydrogenase [Colli... 628 e-178 ref|ZP_04764370.1| acyl-CoA dehydrogenase domain protein [Acidov... 562 e-158 ref|YP_001564710.1| acyl-CoA dehydrogenase domain-containing pro... 562 e-158 ref|YP_004154702.1| acyL-CoA dehydrogenase domain-containing pro... 560 e-157 >ref|YP_003775957.1| acyl-CoA dehydrogenase [Herbaspirillum seropedicae SmR1] gb|ADJ64049.1| acyl-CoA dehydrogenase protein [Herbaspirillum seropedicae SmR1] Length = 386 Score = 685 bits (1768), Expect = 0.0, Method: Composition-based stats. Identities = 345/386 (89%), Positives = 365/386 (94%) Query: 1 MDFELNEDQLAFQASARDFAAGEMAPHAARWDEESHFPVDVIAKAGELGFCALYTPEEVG 60 MDFELN+DQLAFQ SARDFAAGEMAP AA+WDEE+HFP+DVIAKAGELGFC LYTPE G Sbjct: 1 MDFELNQDQLAFQQSARDFAAGEMAPFAAKWDEEAHFPLDVIAKAGELGFCGLYTPEADG 60 Query: 61 GLGLSRLDATVVFEELAYACPSTAAFLTIHNMVSWMIASWATPEVKATWCGDLAAGKKIG 120 GLGLSRLDATVVFEELA AC STAA+LTIHNMVSWMIASW P +KA WC LAAG+KIG Sbjct: 61 GLGLSRLDATVVFEELARACTSTAAYLTIHNMVSWMIASWGQPSLKAQWCEQLAAGRKIG 120 Query: 121 SYCLTEPGSGSDAASLKTTAKLVDGHYLINGSKAFISGAGATDVLVLMARTGGDGAKGVS 180 SYCLTEPGSGSDAASLKTTA+L DGHY++NGSKAFISGAG+TDVLV+MARTGG+GA+GVS Sbjct: 121 SYCLTEPGSGSDAASLKTTARLEDGHYVLNGSKAFISGAGSTDVLVVMARTGGEGARGVS 180 Query: 181 AIVVPGDTPGISYGKKESKMGWNSQPTRTISFDNVKVPVGNLLGEEGEGFVFAMKGLDGG 240 AIVVPG+ PG+SYGKKESKMGWNSQPTRTISFDNVKVP +LLG+EG+GF+FAMKGLDGG Sbjct: 181 AIVVPGNAPGVSYGKKESKMGWNSQPTRTISFDNVKVPADHLLGQEGQGFIFAMKGLDGG 240 Query: 241 RINIATCSVGAAQAALDAAHAYMKERKQFGRPIADFQALQFKLADMQTELVAARQMVRLA 300 RINIATCSVGAAQAALDAAHAYMKERKQFGRPIADFQALQFKLADMQTELVAARQMVRLA Sbjct: 241 RINIATCSVGAAQAALDAAHAYMKERKQFGRPIADFQALQFKLADMQTELVAARQMVRLA 300 Query: 301 AAKLDAGSPEATTYCAMAKRLATDLGFRVCNEALQLHGGYGYIREYPLERYFRDVRVHQI 360 A KLDAGSPEATTYCAMAKRLATDLGFRVCNEALQLHGGYGYIREYPLERYFRDVRVHQI Sbjct: 301 ATKLDAGSPEATTYCAMAKRLATDLGFRVCNEALQLHGGYGYIREYPLERYFRDVRVHQI 360 Query: 361 LEGTNEIMRVIISRNLLGRDTLDDIR 386 LEGTNEIMRVIISR LL RD LDDIR Sbjct: 361 LEGTNEIMRVIISRKLLDRDNLDDIR 386 >ref|YP_004751208.1| branched-chain acyl-CoA dehydrogenase [Collimonas fungivorans Ter331] gb|AEK60385.1| Branched-chain acyl-CoA dehydrogenase [Collimonas fungivorans Ter331] Length = 403 Score = 628 bits (1620), Expect = e-178, Method: Composition-based stats. Identities = 312/386 (80%), Positives = 344/386 (89%) Query: 1 MDFELNEDQLAFQASARDFAAGEMAPHAARWDEESHFPVDVIAKAGELGFCALYTPEEVG 60 MDFEL+E+Q AFQ +ARDFA GE+APHAA+WD E+ FP DVIAKAGELGFC LYTPEEVG Sbjct: 18 MDFELSEEQRAFQQTARDFATGELAPHAAKWDAEAIFPTDVIAKAGELGFCGLYTPEEVG 77 Query: 61 GLGLSRLDATVVFEELAYACPSTAAFLTIHNMVSWMIASWATPEVKATWCGDLAAGKKIG 120 GLGLSRLDAT+VFEELA C ST A+LTIHNMVSWMIA+WATP VK WCG LA G+K+G Sbjct: 78 GLGLSRLDATIVFEELARGCTSTTAYLTIHNMVSWMIANWATPAVKDAWCGKLALGQKLG 137 Query: 121 SYCLTEPGSGSDAASLKTTAKLVDGHYLINGSKAFISGAGATDVLVLMARTGGDGAKGVS 180 SYCLTEPGSGSDAASLKT+A L DGHY+INGSKAFISGAG+T+VLVLMARTG GA GVS Sbjct: 138 SYCLTEPGSGSDAASLKTSAVLTDGHYVINGSKAFISGAGSTNVLVLMARTGAGGAHGVS 197 Query: 181 AIVVPGDTPGISYGKKESKMGWNSQPTRTISFDNVKVPVGNLLGEEGEGFVFAMKGLDGG 240 A VVP D GISYG+KE KMGWNSQPTRTISFDNV++P +LLG+EGEGF AM+GLDGG Sbjct: 198 AFVVPADAAGISYGRKEEKMGWNSQPTRTISFDNVRIPADHLLGQEGEGFRLAMRGLDGG 257 Query: 241 RINIATCSVGAAQAALDAAHAYMKERKQFGRPIADFQALQFKLADMQTELVAARQMVRLA 300 RINIATCSVG AQAALDAAHAYM ER+QF RP++DFQALQFKLADMQTELVAARQMVRLA Sbjct: 258 RINIATCSVGTAQAALDAAHAYMSERRQFNRPLSDFQALQFKLADMQTELVAARQMVRLA 317 Query: 301 AAKLDAGSPEATTYCAMAKRLATDLGFRVCNEALQLHGGYGYIREYPLERYFRDVRVHQI 360 A KLDA P ATTYCAMAKR ATD+GF++CNEALQ+HGGYGYIREYPLER+FRDVRVHQI Sbjct: 318 ACKLDAKDPNATTYCAMAKRFATDIGFQICNEALQIHGGYGYIREYPLERHFRDVRVHQI 377 Query: 361 LEGTNEIMRVIISRNLLGRDTLDDIR 386 LEGTNEIMRVII+R LLG + +DIR Sbjct: 378 LEGTNEIMRVIIARQLLGNASNEDIR 403 >ref|ZP_04764370.1| acyl-CoA dehydrogenase domain protein [Acidovorax delafieldii 2AN] gb|EER58824.1| acyl-CoA dehydrogenase domain protein [Acidovorax delafieldii 2AN] Length = 388 Score = 562 bits (1449), Expect = e-158, Method: Composition-based stats. Identities = 285/388 (73%), Positives = 316/388 (81%), Gaps = 2/388 (0%) Query: 1 MDFELNEDQLAFQASARDFAAGEMAPHAARWDEESHFPVDVIAKAGELGFCALYTPEEVG 60 MDFEL E+Q AF +AR+FA G++APHAA WDEE FP + IAKAGELGFC LY PE G Sbjct: 1 MDFELTEEQRAFAQTAREFAEGQLAPHAAHWDEEGIFPREAIAKAGELGFCGLYAPEAAG 60 Query: 61 GLGLSRLDATVVFEELAYACPSTAAFLTIHNMVSWMIASWATPEVKATWCGDLAAGKKIG 120 GL L RLDAT+VFEE+A PST AF+TIHNM +WM+ +WATP V+ W L G+K+ Sbjct: 61 GLALPRLDATLVFEEMAAVDPSTTAFITIHNMATWMLGTWATPAVRDHWGPLLTTGEKLA 120 Query: 121 SYCLTEPGSGSDAASLKTTAKLVDGHYLINGSKAFISGAGATDVLVLMARTG--GDGAKG 178 SYCLTEPG+GSDAASLKT A+LV Y+INGSKAFISGAG+TDVLVLMARTG GA G Sbjct: 121 SYCLTEPGAGSDAASLKTRAELVGHEYVINGSKAFISGAGSTDVLVLMARTGDASSGAAG 180 Query: 179 VSAIVVPGDTPGISYGKKESKMGWNSQPTRTISFDNVKVPVGNLLGEEGEGFVFAMKGLD 238 +SA VVP D PGISYGKKE KMGWNSQPTRTISFDNV++P +LLG EGEGF AMKGLD Sbjct: 181 ISAFVVPADAPGISYGKKEQKMGWNSQPTRTISFDNVRIPADHLLGREGEGFKIAMKGLD 240 Query: 239 GGRINIATCSVGAAQAALDAAHAYMKERKQFGRPIADFQALQFKLADMQTELVAARQMVR 298 GGRINIATCSVGAAQ AL A YM++RKQFG+PIA FQALQFKLADM TELVAARQMVR Sbjct: 241 GGRINIATCSVGAAQGALQHAQRYMQDRKQFGKPIASFQALQFKLADMATELVAARQMVR 300 Query: 299 LAAAKLDAGSPEATTYCAMAKRLATDLGFRVCNEALQLHGGYGYIREYPLERYFRDVRVH 358 LAA+KLDAG+ +A+TYCAMAKR ATD GF V NEALQLHGGYGYIREYPLER RD RVH Sbjct: 301 LAASKLDAGARDASTYCAMAKRFATDAGFNVVNEALQLHGGYGYIREYPLERLLRDARVH 360 Query: 359 QILEGTNEIMRVIISRNLLGRDTLDDIR 386 QILEGTNEIMRVII R +L D IR Sbjct: 361 QILEGTNEIMRVIIGRRMLDGDAPQTIR 388 >ref|YP_001564710.1| acyl-CoA dehydrogenase domain-containing protein [Delftia acidovorans SPH-1] gb|ABX36325.1| acyl-CoA dehydrogenase domain protein [Delftia acidovorans SPH-1] Length = 388 Score = 562 bits (1448), Expect = e-158, Method: Composition-based stats. Identities = 286/388 (73%), Positives = 314/388 (80%), Gaps = 2/388 (0%) Query: 1 MDFELNEDQLAFQASARDFAAGEMAPHAARWDEESHFPVDVIAKAGELGFCALYTPEEVG 60 MDFELN+DQ AF SAR FA E+APHAA WD ES FP + IAKAGELGFC LY PE G Sbjct: 1 MDFELNDDQRAFAESARAFAQAELAPHAAHWDRESIFPREAIAKAGELGFCGLYAPENAG 60 Query: 61 GLGLSRLDATVVFEELAYACPSTAAFLTIHNMVSWMIASWATPEVKATWCGDLAAGKKIG 120 GL L RLDAT+VFEELA PST AF+TIHNM +WM+ +WAT V+A W L +G+K+ Sbjct: 61 GLQLPRLDATMVFEELAAVDPSTTAFITIHNMATWMLGTWATDAVRAEWGEALTSGRKLA 120 Query: 121 SYCLTEPGSGSDAASLKTTAKLVDGHYLINGSKAFISGAGATDVLVLMARTG--GDGAKG 178 SYCLTEPG+GSDA SLKT A+L Y+ING+KAFISGAG+TD+LVLMARTG G GA G Sbjct: 121 SYCLTEPGAGSDAGSLKTRAELAGHEYIINGAKAFISGAGSTDMLVLMARTGDAGSGASG 180 Query: 179 VSAIVVPGDTPGISYGKKESKMGWNSQPTRTISFDNVKVPVGNLLGEEGEGFVFAMKGLD 238 +SA VP D PGISYGKKE KMGWNSQPTR ISFDNV++P NLLG EGEGF AMKGLD Sbjct: 181 ISAFAVPADLPGISYGKKEEKMGWNSQPTRVISFDNVRIPAQNLLGREGEGFKIAMKGLD 240 Query: 239 GGRINIATCSVGAAQAALDAAHAYMKERKQFGRPIADFQALQFKLADMQTELVAARQMVR 298 GGRINIATCSVGAAQ AL A YM ERKQFG+PIA FQALQFKLADM TELVAARQMVR Sbjct: 241 GGRINIATCSVGAAQGALTQAQQYMHERKQFGKPIASFQALQFKLADMATELVAARQMVR 300 Query: 299 LAAAKLDAGSPEATTYCAMAKRLATDLGFRVCNEALQLHGGYGYIREYPLERYFRDVRVH 358 LAA+KLDAG+ +A+TYCAMAKR TD GF VCNEALQLHGGYGYIREYPLER RD RVH Sbjct: 301 LAASKLDAGARDASTYCAMAKRFVTDAGFMVCNEALQLHGGYGYIREYPLERLMRDARVH 360 Query: 359 QILEGTNEIMRVIISRNLLGRDTLDDIR 386 QILEGTNEIMRVII+R +L D D IR Sbjct: 361 QILEGTNEIMRVIIARRMLEGDAPDMIR 388 >ref|YP_004154702.1| acyL-CoA dehydrogenase domain-containing protein [Variovorax paradoxus EPS] gb|ADU36591.1| acyl-CoA dehydrogenase domain-containing protein [Variovorax paradoxus EPS] Length = 384 Score = 560 bits (1442), Expect = e-157, Method: Composition-based stats. Identities = 280/386 (72%), Positives = 319/386 (82%), Gaps = 2/386 (0%) Query: 1 MDFELNEDQLAFQASARDFAAGEMAPHAARWDEESHFPVDVIAKAGELGFCALYTPEEVG 60 M+FEL+E+Q AF +ARDFA E APHAA+WD E+ FP + IAKAGELGFC LY PE VG Sbjct: 1 MNFELSEEQNAFAQTARDFAQAEFAPHAAQWDAEAIFPKEAIAKAGELGFCGLYAPERVG 60 Query: 61 GLGLSRLDATVVFEELAYACPSTAAFLTIHNMVSWMIASWATPEVKATWCGDLAAGKKIG 120 GLGL RLD+ +VFEE+A PST AF+TIHNM +WM+ +WAT V A W DL +G+K+ Sbjct: 61 GLGLPRLDSALVFEEMAAVDPSTTAFITIHNMATWMLGTWATDAVAAQWGEDLTSGRKLA 120 Query: 121 SYCLTEPGSGSDAASLKTTAKLVDGHYLINGSKAFISGAGATDVLVLMARTGGDGAKGVS 180 SYCLTEPG+GSDA SLKT A+L Y+ING KAFISGAG+TDVLVLMARTGG GA G+S Sbjct: 121 SYCLTEPGAGSDAGSLKTRAELQGAEYVINGGKAFISGAGSTDVLVLMARTGGAGASGIS 180 Query: 181 AIVVPGDTPGISYGKKESKMGWNSQPTRTISFDNVKVPVGNLLGEEGEGFVFAMKGLDGG 240 A VP D PG+SYGKKE KMGWNSQPTRTI+FDNV++P NLLG+EGEGF AMKGLDGG Sbjct: 181 AFAVPADAPGVSYGKKEHKMGWNSQPTRTINFDNVRIPAENLLGKEGEGFRIAMKGLDGG 240 Query: 241 RINIATCSVGAAQAALDAAHAYMKERKQFGRPIADFQALQFKLADMQTELVAARQMVRLA 300 RINIATCSVGAAQ ALDAA Y+ ER+QFG+PIA FQALQFKLADM TELVAARQMVRLA Sbjct: 241 RINIATCSVGAAQGALDAARRYLHERQQFGKPIASFQALQFKLADMATELVAARQMVRLA 300 Query: 301 AAKLDAGSPEATTYCAMAKRLATDLGFRVCNEALQLHGGYGYIREYPLERYFRDVRVHQI 360 A+KLDAG +A+TYCAMAKR ATD GF VCN+ALQLHGGYGY+ E+PLER RD RVHQI Sbjct: 301 ASKLDAGHADASTYCAMAKRFATDAGFNVCNDALQLHGGYGYLSEFPLERLVRDTRVHQI 360 Query: 361 LEGTNEIMRVIISRNLLGRDTLDDIR 386 LEGTNEIMRVI++R LL D+ DIR Sbjct: 361 LEGTNEIMRVIVARKLLEGDS--DIR 384