BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.4767.p (296 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775959.1| phenazine biosynthesis epimerase [Herbaspiri... 479 e-133 ref|YP_004686467.1| isomerase [Cupriavidus necator N-1] >gi|3381... 413 e-113 ref|YP_004751723.1| phenazine biosynthesis phzC/phzF protein [Co... 410 e-112 ref|YP_727228.1| epimerase, PhzC/PhzF-like protein [Ralstonia eu... 408 e-112 ref|YP_582976.1| Phenazine biosynthesis PhzC/PhzF protein [Cupri... 406 e-111 >ref|YP_003775959.1| phenazine biosynthesis epimerase [Herbaspirillum seropedicae SmR1] gb|ADJ64051.1| phenazine biosynthesis epimerase protein [Herbaspirillum seropedicae SmR1] Length = 296 Score = 479 bits (1232), Expect = e-133, Method: Composition-based stats. Identities = 248/296 (83%), Positives = 269/296 (90%) Query: 1 MPATYAYRLLNVFAESTFGGNPLCVFEDARGLDEATMLALALQFNLSETTFILPSAVADA 60 MPATYAYRLLNVFAESTFGGNPLCVFEDARGLD+ATMLALALQFNLSETTFILPS VADA Sbjct: 1 MPATYAYRLLNVFAESTFGGNPLCVFEDARGLDDATMLALALQFNLSETTFILPSTVADA 60 Query: 61 RVRIFTTGYEMPFAGHPTLGTAQVVRDLLGTGDALRLEFKAGVVPVHAEGDVWTFTAPCP 120 RVRIFTTGYEMPFAGHPTLG+A VVRDLLG GDAL LEFKAGVVPV A GD+WTFTAPCP Sbjct: 61 RVRIFTTGYEMPFAGHPTLGSAHVVRDLLGCGDALTLEFKAGVVPVQARGDIWTFTAPCP 120 Query: 121 GGPRTAPSPLSRAEVAALLALDESDLAADPVWVDTGADQFLIPLRSPAAVRRARPDSGLL 180 GGPR P+ LSRA+ AALL L ESDLA DPVWVDTGADQFL+PL++P AVRRA+PDS L Sbjct: 121 GGPRITPAALSRAQTAALLGLQESDLAGDPVWVDTGADQFLVPLKTPEAVRRAQPDSSRL 180 Query: 181 ERWPASSLGRKTAYVFAFDEDAPGQVLARYFFTKQGGGVAEDPGTGSACANLGGWLMATG 240 ++WP SSLGRKTAY+FAFD PGQVL+RYFFTKQGGGVAEDPGTGSACANLG WL+A G Sbjct: 181 DQWPVSSLGRKTAYLFAFDPAEPGQVLSRYFFTKQGGGVAEDPGTGSACANLGAWLLANG 240 Query: 241 HALPARYAISQGAAVDRPSLLYLDVSAAGAIQVGGRVIEIGRGTVTIDPVGQTMLA 296 H LPAR+AI QGAAV+RPS LYLDVS GAI+VGGRVIEIGRGTV+I+PVG+T+LA Sbjct: 241 HPLPARHAIDQGAAVERPSRLYLDVSEEGAIRVGGRVIEIGRGTVSIEPVGRTLLA 296 >ref|YP_004686467.1| isomerase [Cupriavidus necator N-1] gb|AEI77986.1| isomerase [Cupriavidus necator N-1] Length = 286 Score = 413 bits (1062), Expect = e-113, Method: Composition-based stats. Identities = 220/284 (77%), Positives = 240/284 (84%) Query: 4 TYAYRLLNVFAESTFGGNPLCVFEDARGLDEATMLALALQFNLSETTFILPSAVADARVR 63 TYA+RLLNVFAESTFGGNPLCVFEDARG+D ATM ALALQFNLSETTFILPS A ARVR Sbjct: 3 TYAFRLLNVFAESTFGGNPLCVFEDARGMDNATMQALALQFNLSETTFILPSERASARVR 62 Query: 64 IFTTGYEMPFAGHPTLGTAQVVRDLLGTGDALRLEFKAGVVPVHAEGDVWTFTAPCPGGP 123 IFT GYEM FAGHPTLGTA VVR+L GTGDAL LEF AGVVPV A+GDVWTFTAP G P Sbjct: 63 IFTPGYEMRFAGHPTLGTAHVVRELTGTGDALTLEFPAGVVPVTAQGDVWTFTAPHNGKP 122 Query: 124 RTAPSPLSRAEVAALLALDESDLAADPVWVDTGADQFLIPLRSPAAVRRARPDSGLLERW 183 +TAP+ L A++A+LL L E DL P+WVDTGADQ L+ +RS AVRRA PDS L+ W Sbjct: 123 KTAPAGLPDADMASLLGLQERDLLVSPMWVDTGADQLLVAVRSTDAVRRANPDSARLQIW 182 Query: 184 PASSLGRKTAYVFAFDEDAPGQVLARYFFTKQGGGVAEDPGTGSACANLGGWLMATGHAL 243 P SSLGRKTAYVFAFD + PG+VL+RYFFTKQGGGVAEDPGTGSACANLGGWL+ATGHAL Sbjct: 183 PQSSLGRKTAYVFAFDPERPGRVLSRYFFTKQGGGVAEDPGTGSACANLGGWLLATGHAL 242 Query: 244 PARYAISQGAAVDRPSLLYLDVSAAGAIQVGGRVIEIGRGTVTI 287 PA YAI QG AV RP L+L VSA GAI VGGRV+EIGRGTVT+ Sbjct: 243 PAEYAIDQGEAVGRPCRLHLAVSADGAIHVGGRVLEIGRGTVTV 286 >ref|YP_004751723.1| phenazine biosynthesis phzC/phzF protein [Collimonas fungivorans Ter331] gb|AEK60900.1| Phenazine biosynthesis PhzC/PhzF protein [Collimonas fungivorans Ter331] Length = 286 Score = 410 bits (1053), Expect = e-112, Method: Composition-based stats. Identities = 212/285 (74%), Positives = 238/285 (83%) Query: 3 ATYAYRLLNVFAESTFGGNPLCVFEDARGLDEATMLALALQFNLSETTFILPSAVADARV 62 A+YA+RLLNVFAESTFGGN LCVFEDARG+D+ATM ALALQFNLSETTFILPS A ARV Sbjct: 2 ASYAFRLLNVFAESTFGGNQLCVFEDARGMDDATMQALALQFNLSETTFILPSEHATARV 61 Query: 63 RIFTTGYEMPFAGHPTLGTAQVVRDLLGTGDALRLEFKAGVVPVHAEGDVWTFTAPCPGG 122 R+FT GYEM FAGHPTLGTA VVRDL TGD L LEF AG+VPV AEGDVWT TAP GG Sbjct: 62 RVFTPGYEMRFAGHPTLGTAHVVRDLFNTGDTLSLEFTAGLVPVSAEGDVWTLTAPQNGG 121 Query: 123 PRTAPSPLSRAEVAALLALDESDLAADPVWVDTGADQFLIPLRSPAAVRRARPDSGLLER 182 +TAP+ L++AE+AALL L+E+DL A PVW+DTGADQ L+ LRS AVRR PD+ L+ Sbjct: 122 LKTAPANLTQAEMAALLGLNENDLLAAPVWIDTGADQLLVALRSTDAVRRTSPDTAHLDA 181 Query: 183 WPASSLGRKTAYVFAFDEDAPGQVLARYFFTKQGGGVAEDPGTGSACANLGGWLMATGHA 242 WP SSL RKT YVFAFD D PG+VL+RYFF+KQGGGVAEDPGTGSACANLGGWL+A GHA Sbjct: 182 WPESSLERKTVYVFAFDPDRPGRVLSRYFFSKQGGGVAEDPGTGSACANLGGWLVANGHA 241 Query: 243 LPARYAISQGAAVDRPSLLYLDVSAAGAIQVGGRVIEIGRGTVTI 287 LPA+Y I QG AV RP LL L VSA AIQVGG+VIEIGRG +++ Sbjct: 242 LPAQYEIEQGEAVQRPCLLRLKVSADRAIQVGGKVIEIGRGRISL 286 >ref|YP_727228.1| epimerase, PhzC/PhzF-like protein [Ralstonia eutropha H16] emb|CAJ93860.1| predicted epimerase, PhzC/PhzF homolog [Ralstonia eutropha H16] Length = 286 Score = 408 bits (1048), Expect = e-112, Method: Composition-based stats. Identities = 216/284 (76%), Positives = 236/284 (83%) Query: 4 TYAYRLLNVFAESTFGGNPLCVFEDARGLDEATMLALALQFNLSETTFILPSAVADARVR 63 TYA+RLLNVFAE+TFGGNPLCVFEDARG+DEATM ALALQFNLSETTFILPS A ARVR Sbjct: 3 TYAFRLLNVFAEATFGGNPLCVFEDARGMDEATMQALALQFNLSETTFILPSERASARVR 62 Query: 64 IFTTGYEMPFAGHPTLGTAQVVRDLLGTGDALRLEFKAGVVPVHAEGDVWTFTAPCPGGP 123 IFT GYEM FAGHPTLGTA VRDL GTGDAL LEF AGVVPV A+GDVWTFTAP G P Sbjct: 63 IFTPGYEMRFAGHPTLGTAHAVRDLAGTGDALTLEFAAGVVPVTAQGDVWTFTAPHSGKP 122 Query: 124 RTAPSPLSRAEVAALLALDESDLAADPVWVDTGADQFLIPLRSPAAVRRARPDSGLLERW 183 +TAP+ LS A++A+LL L E DL P+WVDTGADQ L+ +R AVRRA PDS L+ W Sbjct: 123 KTAPAGLSDADIASLLGLREHDLLVSPMWVDTGADQLLVAVRGTDAVRRANPDSARLQIW 182 Query: 184 PASSLGRKTAYVFAFDEDAPGQVLARYFFTKQGGGVAEDPGTGSACANLGGWLMATGHAL 243 P SSLGRKT YVFAFD + PG+VL+RYFFTKQGGGVAEDPGTGSACANLGGWL+ATGHAL Sbjct: 183 PQSSLGRKTVYVFAFDPEQPGRVLSRYFFTKQGGGVAEDPGTGSACANLGGWLLATGHAL 242 Query: 244 PARYAISQGAAVDRPSLLYLDVSAAGAIQVGGRVIEIGRGTVTI 287 PA YAI QG AV RP L L A G I+VGGRV+EIGRGTVT+ Sbjct: 243 PAEYAIDQGEAVGRPCRLRLKADAEGTIRVGGRVLEIGRGTVTV 286 >ref|YP_582976.1| Phenazine biosynthesis PhzC/PhzF protein [Cupriavidus metallidurans CH34] gb|ABF07707.1| Phenazine biosynthesis PhzC/PhzF protein [Cupriavidus metallidurans CH34] Length = 305 Score = 406 bits (1044), Expect = e-111, Method: Composition-based stats. Identities = 213/287 (74%), Positives = 241/287 (83%), Gaps = 1/287 (0%) Query: 1 MPATYAYRLLNVFAESTFGGNPLCVFEDARGLDEATMLALALQFNLSETTFILPSAVADA 60 MP T+AYR++NVFAESTFGGNPLCVFEDARGLD+ATM ALALQFNLSETTF+LPS A+A Sbjct: 20 MP-TFAYRIVNVFAESTFGGNPLCVFEDARGLDDATMQALALQFNLSETTFVLPSDNANA 78 Query: 61 RVRIFTTGYEMPFAGHPTLGTAQVVRDLLGTGDALRLEFKAGVVPVHAEGDVWTFTAPCP 120 VRIFT GYEM FAGHPTLGTA VVRDL+ TGDAL LEFKAGVVPV A+GD WT TAP Sbjct: 79 AVRIFTPGYEMRFAGHPTLGTAHVVRDLMKTGDALSLEFKAGVVPVTAKGDRWTLTAPHT 138 Query: 121 GGPRTAPSPLSRAEVAALLALDESDLAADPVWVDTGADQFLIPLRSPAAVRRARPDSGLL 180 G P+TAP+ L AE+A+LL L DLA P+WVDTGADQ L+P+++P AVRRA+PDS L Sbjct: 139 GAPKTAPAGLPDAEMASLLGLTMDDLAGSPMWVDTGADQLLVPVKTPDAVRRAQPDSSRL 198 Query: 181 ERWPASSLGRKTAYVFAFDEDAPGQVLARYFFTKQGGGVAEDPGTGSACANLGGWLMATG 240 +RWP SSLGRKTAYVFAFD + PG+ L RYFFTKQGGGVAEDPGTGSACANLGGWL+ATG Sbjct: 199 DRWPQSSLGRKTAYVFAFDPEQPGKALVRYFFTKQGGGVAEDPGTGSACANLGGWLVATG 258 Query: 241 HALPARYAISQGAAVDRPSLLYLDVSAAGAIQVGGRVIEIGRGTVTI 287 H LPA Y + QG VDR L L+V+ GAI+VGGRVIE+GRGTVT+ Sbjct: 259 HQLPASYEVDQGEFVDRRCRLDLNVTTEGAIRVGGRVIELGRGTVTL 305