BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.4761.p (195 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775962.1| hypothetical protein Hsero_2555 [Herbaspiril... 352 2e-95 ref|YP_001890386.1| hypothetical protein Bphyt_6720 [Burkholderi... 305 2e-81 ref|YP_524491.1| hypothetical protein Rfer_3251 [Rhodoferax ferr... 302 2e-80 ref|YP_001859972.1| hypothetical protein Bphy_3795 [Burkholderia... 292 1e-77 ref|YP_557996.1| hypothetical protein Bxe_A3035 [Burkholderia xe... 292 2e-77 >ref|YP_003775962.1| hypothetical protein Hsero_2555 [Herbaspirillum seropedicae SmR1] gb|ADJ64054.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1] Length = 285 Score = 352 bits (902), Expect = 2e-95, Method: Composition-based stats. Identities = 168/195 (86%), Positives = 186/195 (95%) Query: 1 MSRARIWQLIESGALDFSLSGITNPERDKFAAFAWYFSNKYYLLVRKDAGITQLADVARN 60 MSRARIWQLIESGALDFSLSGITN +RD+FA+FAWYFSNKYYLLVRKDAG+ QLADV RN Sbjct: 91 MSRARIWQLIESGALDFSLSGITNAQRDQFASFAWYFSNKYYLLVRKDAGVMQLADVTRN 150 Query: 61 DRFQLGVIRGFRYSSNANRMVDQLTAANRVTLAGGLEPLYEALLQNRIQGMIMEPFDYPV 120 +RF LGVIRGFRYS+NANRMVDQLTA+NRV+ AGGLEPLY+ALL +RIQGMIMEPFDYPV Sbjct: 151 ERFHLGVIRGFRYSANANRMVDQLTASNRVSQAGGLEPLYDALLLDRIQGMIMEPFDYPV 210 Query: 121 VEEKRIREATTIISFEDPSVPHGLIMSRKALAPAELDKWRALVNGMLADGTVLRIFRKYF 180 V+EKRIR+ATTIISF+DPSVPHGLIMSRKAL+PAE DKWRALV+GM ADGTVLRIF+KYF Sbjct: 211 VQEKRIRDATTIISFDDPSVPHGLIMSRKALSPAEQDKWRALVDGMRADGTVLRIFQKYF 270 Query: 181 NPELAAAMVEFQSKP 195 N ELAA+MV+FQSKP Sbjct: 271 NAELAASMVQFQSKP 285 >ref|YP_001890386.1| hypothetical protein Bphyt_6720 [Burkholderia phytofirmans PsJN] gb|ACD21015.1| conserved hypothetical protein [Burkholderia phytofirmans PsJN] Length = 264 Score = 305 bits (782), Expect = 2e-81, Method: Composition-based stats. Identities = 142/195 (72%), Positives = 171/195 (87%) Query: 1 MSRARIWQLIESGALDFSLSGITNPERDKFAAFAWYFSNKYYLLVRKDAGITQLADVARN 60 MSRARIW+LIESG LDFSLSGITN ER+++A FAWYFSNKYYLLVRKDAGI +LAD N Sbjct: 70 MSRARIWKLIESGGLDFSLSGITNDERNEYADFAWYFSNKYYLLVRKDAGIHRLADFEHN 129 Query: 61 DRFQLGVIRGFRYSSNANRMVDQLTAANRVTLAGGLEPLYEALLQNRIQGMIMEPFDYPV 120 DRFQLGVIR FRYS +ANR+VD+L+A NRV+ AGGLEPLY+AL+ RIQGMI+EPFDYP Sbjct: 130 DRFQLGVIRSFRYSDSANRLVDKLSAENRVSQAGGLEPLYQALILRRIQGMIIEPFDYPA 189 Query: 121 VEEKRIREATTIISFEDPSVPHGLIMSRKALAPAELDKWRALVNGMLADGTVLRIFRKYF 180 ++EK+IR+ TTI+ F+DP+V HGLIMS+KAL+PAE +KWRALVN M ADGTV RIF KYF Sbjct: 190 IDEKKIRDVTTIVEFDDPAVRHGLIMSKKALSPAEREKWRALVNEMRADGTVRRIFEKYF 249 Query: 181 NPELAAAMVEFQSKP 195 P+LA +MV+F+++P Sbjct: 250 KPDLADSMVDFKTQP 264 >ref|YP_524491.1| hypothetical protein Rfer_3251 [Rhodoferax ferrireducens T118] gb|ABD70960.1| conserved hypothetical protein [Rhodoferax ferrireducens T118] Length = 264 Score = 302 bits (773), Expect = 2e-80, Method: Composition-based stats. Identities = 144/195 (73%), Positives = 169/195 (86%) Query: 1 MSRARIWQLIESGALDFSLSGITNPERDKFAAFAWYFSNKYYLLVRKDAGITQLADVARN 60 MSRARIWQLIESGALDFSLSGITN ER++FA FAWYFSNKYYLLVR+D+G+ QLAD R+ Sbjct: 70 MSRARIWQLIESGALDFSLSGITNAERNRFAGFAWYFSNKYYLLVRRDSGVRQLADFERS 129 Query: 61 DRFQLGVIRGFRYSSNANRMVDQLTAANRVTLAGGLEPLYEALLQNRIQGMIMEPFDYPV 120 D F+LGVIR FRYS +ANR+VD+LT ANRV+ A GL PLYE LL NRIQGMI+EPFDYP Sbjct: 130 DPFRLGVIRSFRYSESANRLVDKLTLANRVSQANGLAPLYETLLLNRIQGMIIEPFDYPA 189 Query: 121 VEEKRIREATTIISFEDPSVPHGLIMSRKALAPAELDKWRALVNGMLADGTVLRIFRKYF 180 +++K+IR+ T++I F+DP+VPHGLIMS+KAL+PAE DKWRALVN M ADGTV RIF KYF Sbjct: 190 LDQKKIRDITSVIEFDDPAVPHGLIMSKKALSPAEQDKWRALVNDMRADGTVRRIFEKYF 249 Query: 181 NPELAAAMVEFQSKP 195 +P LAAA+V FQ P Sbjct: 250 DPGLAAALVAFQPPP 264 >ref|YP_001859972.1| hypothetical protein Bphy_3795 [Burkholderia phymatum STM815] gb|ACC72926.1| conserved hypothetical protein [Burkholderia phymatum STM815] Length = 267 Score = 292 bits (748), Expect = 1e-77, Method: Composition-based stats. Identities = 137/191 (71%), Positives = 163/191 (85%) Query: 1 MSRARIWQLIESGALDFSLSGITNPERDKFAAFAWYFSNKYYLLVRKDAGITQLADVARN 60 MSRARIW++IESGALDFSLSGITN ERD++A+FAWYFS+++YLLVRKDAGI QL+D N Sbjct: 73 MSRARIWKVIESGALDFSLSGITNEERDRYASFAWYFSDRFYLLVRKDAGIRQLSDFEHN 132 Query: 61 DRFQLGVIRGFRYSSNANRMVDQLTAANRVTLAGGLEPLYEALLQNRIQGMIMEPFDYPV 120 D FQLGVIR FRY +AN +VD L AANRV+ AGGL+PLY+AL++ IQGMI+EPFDYP Sbjct: 133 DNFQLGVIRSFRYGQSANELVDTLAAANRVSQAGGLDPLYQALMRGSIQGMIIEPFDYPA 192 Query: 121 VEEKRIREATTIISFEDPSVPHGLIMSRKALAPAELDKWRALVNGMLADGTVLRIFRKYF 180 ++EKRIR+ TTI+ F DP+ PHGLIMS+KAL+P E DKWRALV M ADGTV RIFRKYF Sbjct: 193 LDEKRIRDITTIVEFNDPATPHGLIMSKKALSPEERDKWRALVEEMRADGTVRRIFRKYF 252 Query: 181 NPELAAAMVEF 191 PELA +MV+F Sbjct: 253 KPELADSMVDF 263 >ref|YP_557996.1| hypothetical protein Bxe_A3035 [Burkholderia xenovorans LB400] gb|ABE29944.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia xenovorans LB400] Length = 264 Score = 292 bits (748), Expect = 2e-77, Method: Composition-based stats. Identities = 139/195 (71%), Positives = 165/195 (84%) Query: 1 MSRARIWQLIESGALDFSLSGITNPERDKFAAFAWYFSNKYYLLVRKDAGITQLADVARN 60 MSRARIW+LIESGALDFSLSGI N ER+++A+FAWYFS+KYYLLVRKDAGI +A+ ++ Sbjct: 70 MSRARIWKLIESGALDFSLSGIANDERNQYASFAWYFSDKYYLLVRKDAGIHDVAEFEQD 129 Query: 61 DRFQLGVIRGFRYSSNANRMVDQLTAANRVTLAGGLEPLYEALLQNRIQGMIMEPFDYPV 120 D QLGVIR FRYS +AN++VD+LTA NR++ AGGLEPLY+AL+ IQGMI+EPFDYP Sbjct: 130 DHAQLGVIRSFRYSDSANQLVDKLTAENRISQAGGLEPLYQALILRHIQGMIVEPFDYPA 189 Query: 121 VEEKRIREATTIISFEDPSVPHGLIMSRKALAPAELDKWRALVNGMLADGTVLRIFRKYF 180 +EEK+IREATTII F DPSVPHGLIMS+KAL AE KW+ALV+ M ADGTV RIF KYF Sbjct: 190 LEEKKIREATTIIEFNDPSVPHGLIMSKKALPEAERKKWQALVDEMRADGTVRRIFEKYF 249 Query: 181 NPELAAAMVEFQSKP 195 PELA AMV F++ P Sbjct: 250 RPELADAMVNFKASP 264