BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.4756.p         (140 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001352891.1| hypothetical protein mma_1201 [Janthinobacte...   109   1e-22
ref|ZP_08273246.1| putative signal peptide protein [Oxalobactera...   106   1e-21
ref|ZP_08275608.1| hypothetical protein IMCC9480_615 [Oxalobacte...   105   2e-21
ref|YP_584390.1| hypothetical protein Rmet_2242 [Cupriavidus met...    96   2e-18
ref|YP_004752725.1| putative signal peptide protein [Collimonas ...    95   3e-18

>ref|YP_001352891.1| hypothetical protein mma_1201 [Janthinobacterium sp. Marseille]
 gb|ABR91253.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille]
          Length = 134

 Score =  109 bits (273), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 68/141 (48%), Positives = 87/141 (61%), Gaps = 9/141 (6%)

Query: 2   MKKIIFASLVALAASSAVLPV-AQAQVSVNINIG-APPPPREEILPPPRHGYVWAPGFWD 59
           MK+++ A       SS VLP+ A AQVSV++NIG APPP R E +PPPR+GYVWAPG+W+
Sbjct: 1   MKRLVLALAAVAITSSVVLPLQASAQVSVSVNIGTAPPPLRYERVPPPRNGYVWAPGYWN 60

Query: 60  WDGYRHIWREGHWVRERPGYVYAQPVWRQGPRGWELDRGGWRGGPPPGRGPRHDDFDDDH 119
           W+GY+H+W +GHW++ RPGY Y +P WRQ    W LD   W+  P       HD    D 
Sbjct: 61  WNGYQHVWAQGHWIQARPGYSYHRPEWRQDHGRWYLDNERWQPSP-------HDRHYKDK 113

Query: 120 RGPGRGRDRDCPPGPARKGEC 140
                     CPPG A+KG C
Sbjct: 114 HHKKDHHGYHCPPGQAKKGNC 134


>ref|ZP_08273246.1| putative signal peptide protein [Oxalobacteraceae bacterium
           IMCC9480]
 gb|EGF33284.1| putative signal peptide protein [Oxalobacteraceae bacterium
           IMCC9480]
          Length = 157

 Score =  106 bits (264), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 68/135 (50%), Positives = 87/135 (64%), Gaps = 7/135 (5%)

Query: 2   MKKIIFASLVALAASSAVLP-VAQAQVSVNINIG-APPPPREEILPPPRHGYVWAPGFWD 59
           +K+I+FA+   + +++A+LP  A AQV VNI IG APPP R E+ P PR GY WAPG+W+
Sbjct: 5   VKRILFAAAALIFSTAALLPGTASAQVGVNIIIGNAPPPLRYEVRPGPRRGYDWAPGYWN 64

Query: 60  WDGYRHIWREGHWVRERPGYVYAQPVWRQGPRGWELDRGGWRGGPPP-----GRGPRHDD 114
           W+G  HIW  GHW R RPGY+Y+QP W++  + W L+RGGW  G  P     GRG    D
Sbjct: 65  WNGRNHIWAGGHWERSRPGYLYSQPQWQRDGQRWRLNRGGWHQGGGPRAEHHGRGHGGRD 124

Query: 115 FDDDHRGPGRGRDRD 129
            D D R     RDRD
Sbjct: 125 RDHDGRYNRHDRDRD 139


>ref|ZP_08275608.1| hypothetical protein IMCC9480_615 [Oxalobacteraceae bacterium
           IMCC9480]
 gb|EGF30919.1| hypothetical protein IMCC9480_615 [Oxalobacteraceae bacterium
           IMCC9480]
          Length = 146

 Score =  105 bits (263), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 62/102 (60%), Positives = 74/102 (72%), Gaps = 3/102 (2%)

Query: 2   MKKIIFASLVALAASSAV-LPV-AQAQVSVNINIG-APPPPREEILPPPRHGYVWAPGFW 58
           MKKI+ A+ V LA SSA  LP  A AQVSVNI +G APPP R E++PPPR+GY+WAPG+W
Sbjct: 1   MKKILCAAAVMLAFSSAAFLPTQAMAQVSVNIILGDAPPPVRYEVVPPPRNGYLWAPGYW 60

Query: 59  DWDGYRHIWREGHWVRERPGYVYAQPVWRQGPRGWELDRGGW 100
           +W+  +H+W  GHW R R  Y Y QP WRQ   GW LDRGGW
Sbjct: 61  NWNNNQHVWSSGHWERNRVDYRYDQPQWRQEDNGWRLDRGGW 102


>ref|YP_584390.1| hypothetical protein Rmet_2242 [Cupriavidus metallidurans CH34]
 gb|ABF09121.1| conserved hypothetical protein (secreted) [Cupriavidus
           metallidurans CH34]
          Length = 143

 Score = 95.5 bits (236), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 66/118 (55%), Positives = 76/118 (64%), Gaps = 6/118 (5%)

Query: 26  QVSVNINIGAPPP-PREEILPPPRHGYVWAPGFWDWD--GYRHIWREGHWVRERPGYVYA 82
           QVS+NI IG PPP P  E++PPPR GYVWAPG+WDWD  G++H W++GHWV ERPGYVY 
Sbjct: 29  QVSINIGIGVPPPAPVYEVVPPPRAGYVWAPGYWDWDDHGHKHAWKKGHWVGERPGYVYE 88

Query: 83  QPVWRQGPRGWELDRGGWRGGPPPGRGPRHDDFDDDHRGPGRGRDRDCPPGPARKGEC 140
           QP W +   GW L    W  G  PGRG   D         GRG    CPPG A+KGEC
Sbjct: 89  QPRWVRASNGWVLQPERWNRG--PGRGDDDDQGHGHDHDRGRG-GYHCPPGHAKKGEC 143


>ref|YP_004752725.1| putative signal peptide protein [Collimonas fungivorans Ter331]
 gb|AEK61902.1| putative signal peptide protein [Collimonas fungivorans Ter331]
          Length = 144

 Score = 95.1 bits (235), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 69/119 (57%), Positives = 79/119 (66%), Gaps = 2/119 (1%)

Query: 23  AQAQVSVNINIGAPPP-PREEILPPPRHGYVWAPGFWDWDGYRHIWREGHWVRERPGYVY 81
           A AQ+ VNI IG PPP PR E +PPPR GYVWAPG+W+W+G RH+W  GHW R R GY Y
Sbjct: 27  AMAQIGVNITIGTPPPAPRYERVPPPRVGYVWAPGYWNWNGSRHVWAGGHWERARSGYQY 86

Query: 82  AQPVWRQGPRGWELDRGGWRGGPPPGRGPRHDDFDDDHRGPGRGRDRDCPPGPARKGEC 140
           ++P WRQG  GWEL+RGGWR G         D   DD R  G GR   CPPG A+KG C
Sbjct: 87  SRPEWRQGNNGWELNRGGWRRGDDRRDDRHDDRRGDDWRDDGNGR-YHCPPGQAKKGNC 144