BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.4752.p (440 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775970.1| amino acid ABC transporter periplasmic prote... 807 0.0 ref|YP_004753208.1| ABC transporter periplasmic protein [Collimo... 758 0.0 ref|YP_997481.1| putative branched-chain amino acid transport sy... 754 0.0 ref|YP_582373.1| HAAT family ABC transporter periplasmic protein... 740 0.0 ref|ZP_08274238.1| Leucine-, isoleucine-, valine-, threonine-, a... 735 0.0 >ref|YP_003775970.1| amino acid ABC transporter periplasmic protein [Herbaspirillum seropedicae SmR1] gb|ADJ64062.1| ABC-type amino acid transport system, periplasmic component protein [Herbaspirillum seropedicae SmR1] Length = 443 Score = 807 bits (2085), Expect = 0.0, Method: Composition-based stats. Identities = 421/440 (95%), Positives = 432/440 (98%) Query: 1 MKNIKQLVLAATVAASLLAPALPAMAQASDQFIAIPSYRVGPYGTNGQSYYGGYVDYLNY 60 +K+++QL+LA AASLL+ A PA+AQASDQFIAIPSYRVGPYGTNGQSYYGGYVDYLNY Sbjct: 4 IKHLRQLLLATACAASLLSAAAPALAQASDQFIAIPSYRVGPYGTNGQSYYGGYVDYLNY 63 Query: 61 VNLKEGGVNGVKLSWEECETEYNNAKGVECYERMKNKNQVTHGTAINPMATGISYALIDK 120 +N+KEGGVNGVKLSWEECETEYNNAKGVECYERMKNKN VTHGTAINPMATGISYALIDK Sbjct: 64 INIKEGGVNGVKLSWEECETEYNNAKGVECYERMKNKNPVTHGTAINPMATGISYALIDK 123 Query: 121 TAEDKVPLVMIGYGRTDAVDGSVFPYAFPLVTTYQMQVSAIVKYLAGKNNGSLAGKKIVF 180 TAEDKVPLVMIGYGRTDAVDGSVFPYAFPLVTTYQMQVSAIVKYLAGKNNGSLAGKKIVF Sbjct: 124 TAEDKVPLVMIGYGRTDAVDGSVFPYAFPLVTTYQMQVSAIVKYLAGKNNGSLAGKKIVF 183 Query: 181 LYHDSAYGKEPIVALQAESSIGKFKLVEIPVAHPGNEQGAQWLRIRQENPDYVIFWGWGV 240 LYHDSAYGKEPIVALQAE+SIGKFKLVEIPVAHPGNEQGAQWLRIRQENPDYVIFWGWGV Sbjct: 184 LYHDSAYGKEPIVALQAEASIGKFKLVEIPVAHPGNEQGAQWLRIRQENPDYVIFWGWGV 243 Query: 241 MNQTALKAAQKVGYPRDKIVGSWWAGSEEDTIPAGDAAKGYLSATWNVAGKDVPVIADID 300 MNQTALKAAQKVGY RDKIVGSWWAGSEEDTIPAGDAAKGYLSATWNVAGKDVPVIADID Sbjct: 244 MNQTALKAAQKVGYARDKIVGSWWAGSEEDTIPAGDAAKGYLSATWNVAGKDVPVIADID 303 Query: 301 KVVYGAGKGNMQDKNKLGSILYNRGVSAAIATVEAVRTAQDKYGKGKVMSGEQVRWGFEN 360 KVVYGAGKGNMQDKNKLGSILYNRGVSAAIATVEAVRTAQ KYGKGKVMSGEQVRWGFEN Sbjct: 304 KVVYGAGKGNMQDKNKLGSILYNRGVSAAIATVEAVRTAQGKYGKGKVMSGEQVRWGFEN 363 Query: 361 LNITDARLKALGATGLLPEIKTSCDNHEGSGKVKIQQWDGTKWVLVSDWIEGNKNLIHPL 420 LNITDARLKALGATGLLPEIKTSCDNHEGSGKVKIQQWDG+KWVLVSDWIEGNKNLIHPL Sbjct: 364 LNITDARLKALGATGLLPEIKTSCDNHEGSGKVKIQQWDGSKWVLVSDWIEGNKNLIHPL 423 Query: 421 FKASAAKYAKEKGITPACMK 440 FKASAAKYAKEKGITPACMK Sbjct: 424 FKASAAKYAKEKGITPACMK 443 >ref|YP_004753208.1| ABC transporter periplasmic protein [Collimonas fungivorans Ter331] gb|AEK62385.1| ABC-type transporter, periplasmic component: HAAT family [Collimonas fungivorans Ter331] Length = 440 Score = 758 bits (1958), Expect = 0.0, Method: Composition-based stats. Identities = 391/440 (88%), Positives = 422/440 (95%) Query: 1 MKNIKQLVLAATVAASLLAPALPAMAQASDQFIAIPSYRVGPYGTNGQSYYGGYVDYLNY 60 MKN+K+++LA AASLLAPALPAMAQASDQFIAIPSYRVGPYGTNGQSYYGGY+DYL+Y Sbjct: 1 MKNLKRIMLAVAAAASLLAPALPAMAQASDQFIAIPSYRVGPYGTNGQSYYGGYIDYLSY 60 Query: 61 VNLKEGGVNGVKLSWEECETEYNNAKGVECYERMKNKNQVTHGTAINPMATGISYALIDK 120 VNLKEGG+NGVKLSWEECETEYNNAKGVECYER+K KN VT GTAIN MATGI+YALIDK Sbjct: 61 VNLKEGGINGVKLSWEECETEYNNAKGVECYERLKGKNPVTKGTAINAMATGIAYALIDK 120 Query: 121 TAEDKVPLVMIGYGRTDAVDGSVFPYAFPLVTTYQMQVSAIVKYLAGKNNGSLAGKKIVF 180 TAEDKVPL+M+GYGRTDAVDGSVFPYAFPLVTTYQMQVSAIVKYLA KN GSL+GKKIVF Sbjct: 121 TAEDKVPLLMVGYGRTDAVDGSVFPYAFPLVTTYQMQVSAIVKYLASKNGGSLSGKKIVF 180 Query: 181 LYHDSAYGKEPIVALQAESSIGKFKLVEIPVAHPGNEQGAQWLRIRQENPDYVIFWGWGV 240 LYHDSAYGKEPIVAL+AE+++GKFKLV+IPVAHPGNEQGAQWL+IRQENPDYVIFWGWGV Sbjct: 181 LYHDSAYGKEPIVALEAEATLGKFKLVQIPVAHPGNEQGAQWLKIRQENPDYVIFWGWGV 240 Query: 241 MNQTALKAAQKVGYPRDKIVGSWWAGSEEDTIPAGDAAKGYLSATWNVAGKDVPVIADID 300 MNQTALKAAQKVG+ RDKI+GSWWAGSEEDT+PAGDAAKGYLSATWNV+GK VP+IADI+ Sbjct: 241 MNQTALKAAQKVGFARDKIIGSWWAGSEEDTVPAGDAAKGYLSATWNVSGKSVPLIADIE 300 Query: 301 KVVYGAGKGNMQDKNKLGSILYNRGVSAAIATVEAVRTAQDKYGKGKVMSGEQVRWGFEN 360 KVVYGAGKGNMQDK K+GSILYNRGVSAA+ATVEA+R AQ KYGKGKVMSGE VRWG EN Sbjct: 301 KVVYGAGKGNMQDKAKIGSILYNRGVSAALATVEAIRAAQAKYGKGKVMSGEDVRWGLEN 360 Query: 361 LNITDARLKALGATGLLPEIKTSCDNHEGSGKVKIQQWDGTKWVLVSDWIEGNKNLIHPL 420 LNIT+ARL+ LGA+GLLPEIKTSCDNHEGSGK+KIQQWDG KWVLVSDWIEGNKNLIHPL Sbjct: 361 LNITNARLQQLGASGLLPEIKTSCDNHEGSGKIKIQQWDGGKWVLVSDWIEGNKNLIHPL 420 Query: 421 FKASAAKYAKEKGITPACMK 440 FKASAAKYAKEKGITPACMK Sbjct: 421 FKASAAKYAKEKGITPACMK 440 >ref|YP_997481.1| putative branched-chain amino acid transport system substrate-binding protein [Verminephrobacter eiseniae EF01-2] gb|ABM58463.1| putative branched-chain amino acid transport system substrate-binding protein [Verminephrobacter eiseniae EF01-2] Length = 441 Score = 754 bits (1947), Expect = 0.0, Method: Composition-based stats. Identities = 383/440 (87%), Positives = 417/440 (94%) Query: 1 MKNIKQLVLAATVAASLLAPALPAMAQASDQFIAIPSYRVGPYGTNGQSYYGGYVDYLNY 60 MK+IK LAA +AASLL PA AMAQA+DQFIAIPSYRVGPYGTNGQSYYGGYVDYLNY Sbjct: 1 MKSIKHPGLAAILAASLLLPAQSAMAQANDQFIAIPSYRVGPYGTNGQSYYGGYVDYLNY 60 Query: 61 VNLKEGGVNGVKLSWEECETEYNNAKGVECYERMKNKNQVTHGTAINPMATGISYALIDK 120 VN+KEGG++GVK+SWEECETEYNNAKGVECYERMK++N VT GTAIN MATGISYALIDK Sbjct: 61 VNMKEGGIDGVKISWEECETEYNNAKGVECYERMKSRNPVTRGTAINTMATGISYALIDK 120 Query: 121 TAEDKVPLVMIGYGRTDAVDGSVFPYAFPLVTTYQMQVSAIVKYLAGKNNGSLAGKKIVF 180 TAEDKVPL+M+GYGRTDAVDGSVFPYAFPLVTTYQMQ SA+VK++A +N GSLAGKKIVF Sbjct: 121 TAEDKVPLLMLGYGRTDAVDGSVFPYAFPLVTTYQMQASAVVKFIASRNGGSLAGKKIVF 180 Query: 181 LYHDSAYGKEPIVALQAESSIGKFKLVEIPVAHPGNEQGAQWLRIRQENPDYVIFWGWGV 240 LYHDSAYGKEPIVALQAE+S+GKF LVEIPVAHPGNEQGAQWLRIRQENPDYVIFWGWGV Sbjct: 181 LYHDSAYGKEPIVALQAEASLGKFTLVEIPVAHPGNEQGAQWLRIRQENPDYVIFWGWGV 240 Query: 241 MNQTALKAAQKVGYPRDKIVGSWWAGSEEDTIPAGDAAKGYLSATWNVAGKDVPVIADID 300 MNQTALKAAQKVGY R+K+VGSWWAGSEEDTIPAGDAAKGY+SATWNV GKDVP+IADI+ Sbjct: 241 MNQTALKAAQKVGYSREKMVGSWWAGSEEDTIPAGDAAKGYMSATWNVTGKDVPLIADIE 300 Query: 301 KVVYGAGKGNMQDKNKLGSILYNRGVSAAIATVEAVRTAQDKYGKGKVMSGEQVRWGFEN 360 KVVYGAGKGNMQDK K+GS LYNRGVS A+AT+EAVRTAQ K+GKGKVMSGE +RWG EN Sbjct: 301 KVVYGAGKGNMQDKGKIGSALYNRGVSGALATIEAVRTAQGKFGKGKVMSGEHMRWGLEN 360 Query: 361 LNITDARLKALGATGLLPEIKTSCDNHEGSGKVKIQQWDGTKWVLVSDWIEGNKNLIHPL 420 LNIT+ARL+ LGATGLLPEIKTSC+NHEGSGK+KIQQWDG+KWVLVSDWIEGNKNLIHPL Sbjct: 361 LNITNARLQQLGATGLLPEIKTSCENHEGSGKIKIQQWDGSKWVLVSDWIEGNKNLIHPL 420 Query: 421 FKASAAKYAKEKGITPACMK 440 FKASAA+YAKEKGITPACM+ Sbjct: 421 FKASAARYAKEKGITPACMQ 440 >ref|YP_582373.1| HAAT family ABC transporter periplasmic protein [Cupriavidus metallidurans CH34] gb|ABF07104.1| ABC-type transporter, periplasmic component: HAAT family [Cupriavidus metallidurans CH34] Length = 445 Score = 740 bits (1910), Expect = 0.0, Method: Composition-based stats. Identities = 362/439 (82%), Positives = 412/439 (93%) Query: 2 KNIKQLVLAATVAASLLAPALPAMAQASDQFIAIPSYRVGPYGTNGQSYYGGYVDYLNYV 61 +N+++ L +VAA++L PALPA+AQ +DQF+A+PSYRVGPYG NGQS+YGG+VDYLNYV Sbjct: 6 RNVQRAALVVSVAAAMLVPALPALAQTNDQFVALPSYRVGPYGANGQSFYGGFVDYLNYV 65 Query: 62 NLKEGGVNGVKLSWEECETEYNNAKGVECYERMKNKNQVTHGTAINPMATGISYALIDKT 121 NLKEGGVNGVKL WEECETEYNNAKGVECYER+K K+ + GTA + M+TGISYAL+DKT Sbjct: 66 NLKEGGVNGVKLGWEECETEYNNAKGVECYERLKAKSSASKGTAYHTMSTGISYALVDKT 125 Query: 122 AEDKVPLVMIGYGRTDAVDGSVFPYAFPLVTTYQMQVSAIVKYLAGKNNGSLAGKKIVFL 181 A DKVPLVM+GYGRTDAVDGSVFPYAFPLVTTYQMQVSAIVK+LA KN GSLAGKKIV+L Sbjct: 126 AADKVPLVMMGYGRTDAVDGSVFPYAFPLVTTYQMQVSAIVKFLASKNGGSLAGKKIVYL 185 Query: 182 YHDSAYGKEPIVALQAESSIGKFKLVEIPVAHPGNEQGAQWLRIRQENPDYVIFWGWGVM 241 YHDSAYGKEPIVAL+AE+ +GKF LVEIPVAHPGNEQGAQWL+IRQENPDYVIFWGWGVM Sbjct: 186 YHDSAYGKEPIVALEAEAKLGKFNLVEIPVAHPGNEQGAQWLKIRQENPDYVIFWGWGVM 245 Query: 242 NQTALKAAQKVGYPRDKIVGSWWAGSEEDTIPAGDAAKGYLSATWNVAGKDVPVIADIDK 301 NQTALKAAQKVGY RDK++GSWWAGSEEDT+PAG+AAKGY+SATWNVAGK+VP+IADI+K Sbjct: 246 NQTALKAAQKVGYSRDKMIGSWWAGSEEDTVPAGEAAKGYMSATWNVAGKNVPLIADIEK 305 Query: 302 VVYGAGKGNMQDKNKLGSILYNRGVSAAIATVEAVRTAQDKYGKGKVMSGEQVRWGFENL 361 VVYGAGKGNMQD+NK+GS+LYNRGVSAA+ TVEA+R AQ K+GKGKVMSG+++RW FENL Sbjct: 306 VVYGAGKGNMQDRNKVGSVLYNRGVSAAVVTVEAIRGAQAKFGKGKVMSGDEMRWAFENL 365 Query: 362 NITDARLKALGATGLLPEIKTSCDNHEGSGKVKIQQWDGTKWVLVSDWIEGNKNLIHPLF 421 N+T ARL+ +GATGLLPEIKTSCDNHEGSGKVKIQQWDG KWV+VSDWIEGNK+LIHPLF Sbjct: 366 NLTSARLQQVGATGLLPEIKTSCDNHEGSGKVKIQQWDGAKWVVVSDWIEGNKSLIHPLF 425 Query: 422 KASAAKYAKEKGITPACMK 440 KA+AA+YAKEKGITPACMK Sbjct: 426 KATAAQYAKEKGITPACMK 444 >ref|ZP_08274238.1| Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein [Oxalobacteraceae bacterium IMCC9480] gb|EGF32291.1| Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein [Oxalobacteraceae bacterium IMCC9480] Length = 440 Score = 735 bits (1898), Expect = 0.0, Method: Composition-based stats. Identities = 371/440 (84%), Positives = 405/440 (92%) Query: 1 MKNIKQLVLAATVAASLLAPALPAMAQASDQFIAIPSYRVGPYGTNGQSYYGGYVDYLNY 60 M +K ++ AA A+LLAP A+AQA+DQFIAIPSYRVGPYG NGQS+YGGYVDYLNY Sbjct: 1 MTKLKNILFAAATVATLLAPMTQAVAQANDQFIAIPSYRVGPYGANGQSFYGGYVDYLNY 60 Query: 61 VNLKEGGVNGVKLSWEECETEYNNAKGVECYERMKNKNQVTHGTAINPMATGISYALIDK 120 +N+KEGGVNGVKLSWEECETEYNNAKGVECYER+KNKN +T GTA N MATGISYALIDK Sbjct: 61 INMKEGGVNGVKLSWEECETEYNNAKGVECYERLKNKNPITKGTAYNVMATGISYALIDK 120 Query: 121 TAEDKVPLVMIGYGRTDAVDGSVFPYAFPLVTTYQMQVSAIVKYLAGKNNGSLAGKKIVF 180 TAEDKVPL+M+GYGRTDAVDGSVFPYAFPLVTTYQMQ SAIVKYL KN GSLAGKKI F Sbjct: 121 TAEDKVPLMMVGYGRTDAVDGSVFPYAFPLVTTYQMQASAIVKYLTTKNGGSLAGKKIAF 180 Query: 181 LYHDSAYGKEPIVALQAESSIGKFKLVEIPVAHPGNEQGAQWLRIRQENPDYVIFWGWGV 240 LYHDSAYGKEPI AL+AES IGKF LV+IPVAHPGNEQGAQWLRIRQENPDYVIFWGWGV Sbjct: 181 LYHDSAYGKEPIGALEAESLIGKFALVQIPVAHPGNEQGAQWLRIRQENPDYVIFWGWGV 240 Query: 241 MNQTALKAAQKVGYPRDKIVGSWWAGSEEDTIPAGDAAKGYLSATWNVAGKDVPVIADID 300 MNQTA+KAAQKVGY R+K++GSWWAGSEEDT+PAG+AAKGY+SATWNV+GK+VPVI DI+ Sbjct: 241 MNQTAMKAAQKVGYSREKMIGSWWAGSEEDTVPAGEAAKGYMSATWNVSGKNVPVITDIE 300 Query: 301 KVVYGAGKGNMQDKNKLGSILYNRGVSAAIATVEAVRTAQDKYGKGKVMSGEQVRWGFEN 360 KVVY AGKGNMQD+ K+G+ILYNRGVS AIATVEA+RTAQ KYGKGKV+SGEQ+RWG EN Sbjct: 301 KVVYAAGKGNMQDQAKVGTILYNRGVSVAIATVEAIRTAQGKYGKGKVISGEQMRWGLEN 360 Query: 361 LNITDARLKALGATGLLPEIKTSCDNHEGSGKVKIQQWDGTKWVLVSDWIEGNKNLIHPL 420 LNIT+ARL LGATGLLPEIKTSCDNHEGSGKVKIQQWDG KWVL+SDWIEGNK LIHPL Sbjct: 361 LNITNARLGTLGATGLLPEIKTSCDNHEGSGKVKIQQWDGAKWVLISDWIEGNKALIHPL 420 Query: 421 FKASAAKYAKEKGITPACMK 440 FKA+AAKYAKEK ITPACMK Sbjct: 421 FKANAAKYAKEKNITPACMK 440