BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.4751.p (371 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775971.1| amino acid ABC transporter permease [Herbasp... 598 e-169 ref|YP_004753209.1| inner-membrane translocator [Collimonas fung... 562 e-158 ref|YP_001795622.1| branched-chain amino acid ABC transporter pe... 560 e-157 ref|YP_582372.1| ABC transporter livM-like permease component [C... 558 e-157 ref|YP_294489.1| inner-membrane translocator [Ralstonia eutropha... 556 e-156 >ref|YP_003775971.1| amino acid ABC transporter permease [Herbaspirillum seropedicae SmR1] gb|ADJ64063.1| ABC-type amino acid transport system, permease component protein [Herbaspirillum seropedicae SmR1] Length = 358 Score = 598 bits (1541), Expect = e-169, Method: Composition-based stats. Identities = 354/358 (98%), Positives = 357/358 (99%) Query: 14 MLYREAGQFKTSYIADSQIFPIRQDRIIFTLFMVFAFVGVPLLGSEYWFSAILVPFLVFA 73 MLYREAGQFKTSYIADSQIFPIRQDRIIFTLFMVFAFVGVPLLGSEYWFSAILVPFLVFA Sbjct: 1 MLYREAGQFKTSYIADSQIFPIRQDRIIFTLFMVFAFVGVPLLGSEYWFSAILVPFLVFA 60 Query: 74 LAALGLNVLTGYAGQLSLGSAAFMAVGAYAAYNFQLRVEGIPIVATLLLSGACAAMVGVL 133 LAALGLNVLTGYAGQLSLGSAAFMAVGAYAAYNFQLRV+GIPIVATLLLSG CAA+VGVL Sbjct: 61 LAALGLNVLTGYAGQLSLGSAAFMAVGAYAAYNFQLRVDGIPIVATLLLSGGCAALVGVL 120 Query: 134 FGLPSLRIKGFYLAVATLAAQFFVVWALTKFPWFSNNSSSGVISTPKIDFFGIAIDTPVR 193 FGLPSLRIKGFYLAVATLAAQFFVVWALTKFPWFSNNSSSGVISTPKIDFFGIAIDTPVR Sbjct: 121 FGLPSLRIKGFYLAVATLAAQFFVVWALTKFPWFSNNSSSGVISTPKIDFFGIAIDTPVR 180 Query: 194 KYLFVLAVVSVLALVAKNLVRSSTGRAWMAVRDMDVAAEVIGIPLMRTKLTAFAVSSFYC 253 KYLFVLAVVSVLALVAKNLVRSSTGRAWMAVRDMDVAAEVIGIPLMRTKLTAFAVSSFYC Sbjct: 181 KYLFVLAVVSVLALVAKNLVRSSTGRAWMAVRDMDVAAEVIGIPLMRTKLTAFAVSSFYC 240 Query: 254 GVAGALYAFCYLGSVEPDGFSLDLSFRILFMIIIGGVGSILGSFLGSAFILLLPIFLDNA 313 GVAGALYAFCYLGSVEPDGFSLDLSFRILFMIIIGGVGSILGSFLGSAFILLLPIFLDNA Sbjct: 241 GVAGALYAFCYLGSVEPDGFSLDLSFRILFMIIIGGVGSILGSFLGSAFILLLPIFLDNA 300 Query: 314 LPPLASLLHLPFTNATVSHIQMMVFGALIIFFLIAEPHGLARLWQIAKEKLRLWPFPH 371 LPPLA+LLHLPFTNATVSHIQMMVFGALIIFFLIAEPHGLARLWQIAKEKLRLWPFPH Sbjct: 301 LPPLAALLHLPFTNATVSHIQMMVFGALIIFFLIAEPHGLARLWQIAKEKLRLWPFPH 358 >ref|YP_004753209.1| inner-membrane translocator [Collimonas fungivorans Ter331] gb|AEK62386.1| inner-membrane translocator [Collimonas fungivorans Ter331] Length = 358 Score = 562 bits (1449), Expect = e-158, Method: Composition-based stats. Identities = 312/358 (87%), Positives = 336/358 (93%) Query: 14 MLYREAGQFKTSYIADSQIFPIRQDRIIFTLFMVFAFVGVPLLGSEYWFSAILVPFLVFA 73 M YREAGQFKTSY+ADSQIFPIRQDRI + + AFVG+PL+GSEYWFSAIL+PFLVFA Sbjct: 1 MFYREAGQFKTSYVADSQIFPIRQDRIGMAILLAVAFVGIPLIGSEYWFSAILIPFLVFA 60 Query: 74 LAALGLNVLTGYAGQLSLGSAAFMAVGAYAAYNFQLRVEGIPIVATLLLSGACAAMVGVL 133 LAALGLN+LTGYAGQLSLGSAAFMAVGAYAAYNFQLRVEGIPI+ + +L+G CAA VGVL Sbjct: 61 LAALGLNILTGYAGQLSLGSAAFMAVGAYAAYNFQLRVEGIPILLSFILAGCCAAAVGVL 120 Query: 134 FGLPSLRIKGFYLAVATLAAQFFVVWALTKFPWFSNNSSSGVISTPKIDFFGIAIDTPVR 193 FGLPSLRIKGFYLAVATLAAQFFV+W LTKFPWFSN+SSSGVIS KI+ FGIAI++PVR Sbjct: 121 FGLPSLRIKGFYLAVATLAAQFFVIWVLTKFPWFSNDSSSGVISAQKINLFGIAINSPVR 180 Query: 194 KYLFVLAVVSVLALVAKNLVRSSTGRAWMAVRDMDVAAEVIGIPLMRTKLTAFAVSSFYC 253 KYLFVLAVV +AL+AKNLVRSSTGRAWMAVRDMDVAAEVIGI LM+TKL AFAVSSF+C Sbjct: 181 KYLFVLAVVCAMALLAKNLVRSSTGRAWMAVRDMDVAAEVIGIRLMQTKLLAFAVSSFFC 240 Query: 254 GVAGALYAFCYLGSVEPDGFSLDLSFRILFMIIIGGVGSILGSFLGSAFILLLPIFLDNA 313 GVAGALYAFCYLGSVEPDGFSLDLSFRILFMII+GGVGSILG+FLGSAFILLLPIFLDN Sbjct: 241 GVAGALYAFCYLGSVEPDGFSLDLSFRILFMIIVGGVGSILGAFLGSAFILLLPIFLDNV 300 Query: 314 LPPLASLLHLPFTNATVSHIQMMVFGALIIFFLIAEPHGLARLWQIAKEKLRLWPFPH 371 LPPLA+ LHLPFTNATVSHIQMM+FGALIIFFLIAEPHGLARLWQI KEKLRLWPFPH Sbjct: 301 LPPLATWLHLPFTNATVSHIQMMLFGALIIFFLIAEPHGLARLWQITKEKLRLWPFPH 358 >ref|YP_001795622.1| branched-chain amino acid ABC transporter permease [Cupriavidus taiwanensis LMG 19424] emb|CAP62900.1| putative branched-chain amino acid transport system permease, membrane component [Cupriavidus taiwanensis LMG 19424] Length = 358 Score = 560 bits (1442), Expect = e-157, Method: Composition-based stats. Identities = 309/358 (86%), Positives = 336/358 (93%) Query: 14 MLYREAGQFKTSYIADSQIFPIRQDRIIFTLFMVFAFVGVPLLGSEYWFSAILVPFLVFA 73 M YREAGQFKTSY+ADSQIFPIRQDRI F + M AFV +P +GSEYWFSAIL+PFL+F+ Sbjct: 1 MFYREAGQFKTSYVADSQIFPIRQDRIGFAVLMAVAFVAIPFVGSEYWFSAILIPFLIFS 60 Query: 74 LAALGLNVLTGYAGQLSLGSAAFMAVGAYAAYNFQLRVEGIPIVATLLLSGACAAMVGVL 133 LAALGLN+LTGYAGQLSLG+AAFMAVGAYAAYNFQLR+EG+P++ T +L+G AA+VGV Sbjct: 61 LAALGLNILTGYAGQLSLGTAAFMAVGAYAAYNFQLRIEGMPVLLTFILAGLSAALVGVA 120 Query: 134 FGLPSLRIKGFYLAVATLAAQFFVVWALTKFPWFSNNSSSGVISTPKIDFFGIAIDTPVR 193 FGLPSLRIKGFYLAVATLAAQFFVVWALTKFPWFSNNSSSGVI+ ++D FG AIDTPV+ Sbjct: 121 FGLPSLRIKGFYLAVATLAAQFFVVWALTKFPWFSNNSSSGVITAQRLDLFGYAIDTPVK 180 Query: 194 KYLFVLAVVSVLALVAKNLVRSSTGRAWMAVRDMDVAAEVIGIPLMRTKLTAFAVSSFYC 253 KYLFVLA+V+VLAL AKNLVRS+TGRAWM+VRDMDVAAEVIGIPLMRTKL AFAVSSFYC Sbjct: 181 KYLFVLAIVTVLALAAKNLVRSATGRAWMSVRDMDVAAEVIGIPLMRTKLLAFAVSSFYC 240 Query: 254 GVAGALYAFCYLGSVEPDGFSLDLSFRILFMIIIGGVGSILGSFLGSAFILLLPIFLDNA 313 GVAGALYAFCYLGSVEPDGFSLDLSFR+LFMIIIGGVGSILGSFLG+AFILLLPIFLDN Sbjct: 241 GVAGALYAFCYLGSVEPDGFSLDLSFRVLFMIIIGGVGSILGSFLGAAFILLLPIFLDNV 300 Query: 314 LPPLASLLHLPFTNATVSHIQMMVFGALIIFFLIAEPHGLARLWQIAKEKLRLWPFPH 371 LPPLASLLHLPFTNATVSHIQ+MVFG LIIFFLI EPHGLARLWQIAKEKLRLWPFPH Sbjct: 301 LPPLASLLHLPFTNATVSHIQLMVFGGLIIFFLIVEPHGLARLWQIAKEKLRLWPFPH 358 >ref|YP_582372.1| ABC transporter livM-like permease component [Cupriavidus metallidurans CH34] gb|ABF07103.1| ABC-type transporter, livM-like permease component [Cupriavidus metallidurans CH34] Length = 358 Score = 558 bits (1437), Expect = e-157, Method: Composition-based stats. Identities = 308/358 (86%), Positives = 334/358 (93%) Query: 14 MLYREAGQFKTSYIADSQIFPIRQDRIIFTLFMVFAFVGVPLLGSEYWFSAILVPFLVFA 73 MLYRE+GQFKTSY+ADSQIFPIRQDRI F L M AFV +P +G+EYW SAIL PFL+F+ Sbjct: 1 MLYRESGQFKTSYVADSQIFPIRQDRIFFALLMAVAFVAIPFVGTEYWLSAILTPFLIFS 60 Query: 74 LAALGLNVLTGYAGQLSLGSAAFMAVGAYAAYNFQLRVEGIPIVATLLLSGACAAMVGVL 133 LAALGLN+LTGYAGQLSLG+AAFMAVGAYAAYNFQLR+EGIP++ T +L+GA AA+VGV Sbjct: 61 LAALGLNILTGYAGQLSLGTAAFMAVGAYAAYNFQLRIEGIPVLLTFILAGASAAVVGVA 120 Query: 134 FGLPSLRIKGFYLAVATLAAQFFVVWALTKFPWFSNNSSSGVISTPKIDFFGIAIDTPVR 193 FGLPSLRIKGFYLAVATLAAQFFVVWALTKFPW SNNSSSGVI+ ++D FG+AIDTPV+ Sbjct: 121 FGLPSLRIKGFYLAVATLAAQFFVVWALTKFPWLSNNSSSGVITAQRLDLFGVAIDTPVK 180 Query: 194 KYLFVLAVVSVLALVAKNLVRSSTGRAWMAVRDMDVAAEVIGIPLMRTKLTAFAVSSFYC 253 KYLFVL +V+VLAL+AKNLVRS+TGRAWMAVRDMDVAAEVIGIPLMRTKL AFAVSSFYC Sbjct: 181 KYLFVLGIVTVLALIAKNLVRSATGRAWMAVRDMDVAAEVIGIPLMRTKLLAFAVSSFYC 240 Query: 254 GVAGALYAFCYLGSVEPDGFSLDLSFRILFMIIIGGVGSILGSFLGSAFILLLPIFLDNA 313 GVAGALYAFCYLGSVEPDGFSLDLSFRILFMIIIGGVGSILGSFLG+AFILLLPIFLDN Sbjct: 241 GVAGALYAFCYLGSVEPDGFSLDLSFRILFMIIIGGVGSILGSFLGAAFILLLPIFLDNV 300 Query: 314 LPPLASLLHLPFTNATVSHIQMMVFGALIIFFLIAEPHGLARLWQIAKEKLRLWPFPH 371 LP LAS LHLPFTNATVSHIQ+MVFG LIIFFLI EPHGLARLWQIAKEKLRLWPFPH Sbjct: 301 LPALASSLHLPFTNATVSHIQLMVFGGLIIFFLIVEPHGLARLWQIAKEKLRLWPFPH 358 >ref|YP_294489.1| inner-membrane translocator [Ralstonia eutropha JMP134] gb|AAZ59645.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Ralstonia eutropha JMP134] Length = 358 Score = 556 bits (1433), Expect = e-156, Method: Composition-based stats. Identities = 306/358 (85%), Positives = 336/358 (93%) Query: 14 MLYREAGQFKTSYIADSQIFPIRQDRIIFTLFMVFAFVGVPLLGSEYWFSAILVPFLVFA 73 M YREAGQFKTSY++DSQIFPIRQDRI F + M AF +P +GSEYWFSAIL+PFL+F+ Sbjct: 1 MFYREAGQFKTSYVSDSQIFPIRQDRIGFAVLMAVAFGVIPFVGSEYWFSAILIPFLIFS 60 Query: 74 LAALGLNVLTGYAGQLSLGSAAFMAVGAYAAYNFQLRVEGIPIVATLLLSGACAAMVGVL 133 LAALGLN+LTGYAGQLSLG+AAFMAVGAYAAYNFQLR+EG+P++ T +L+G AA+VGV Sbjct: 61 LAALGLNILTGYAGQLSLGTAAFMAVGAYAAYNFQLRIEGMPVLLTFILAGLSAAVVGVA 120 Query: 134 FGLPSLRIKGFYLAVATLAAQFFVVWALTKFPWFSNNSSSGVISTPKIDFFGIAIDTPVR 193 FGLPSLRIKGFYLAVATLAAQFFVVWALTKFPWFSNNSSSGVI+ ++D FGIAIDTPV+ Sbjct: 121 FGLPSLRIKGFYLAVATLAAQFFVVWALTKFPWFSNNSSSGVITAQRLDLFGIAIDTPVK 180 Query: 194 KYLFVLAVVSVLALVAKNLVRSSTGRAWMAVRDMDVAAEVIGIPLMRTKLTAFAVSSFYC 253 KYLFVLA+V+VLA +AKNLVRS+TGRAWM+VRDMDVAAEVIGIPLMRTKL AFAVSSFYC Sbjct: 181 KYLFVLALVTVLAFIAKNLVRSATGRAWMSVRDMDVAAEVIGIPLMRTKLLAFAVSSFYC 240 Query: 254 GVAGALYAFCYLGSVEPDGFSLDLSFRILFMIIIGGVGSILGSFLGSAFILLLPIFLDNA 313 GVAGALYAFCYLGSVEPDGFSLDLSFR+LFMIIIGGVGSILGSFLG+AFILLLPIFLDN Sbjct: 241 GVAGALYAFCYLGSVEPDGFSLDLSFRVLFMIIIGGVGSILGSFLGAAFILLLPIFLDNV 300 Query: 314 LPPLASLLHLPFTNATVSHIQMMVFGALIIFFLIAEPHGLARLWQIAKEKLRLWPFPH 371 LPPLASLLHLPFTNATVSHIQ+MVFG LIIFFLI EPHGLARLWQI+KEKLRLWPFPH Sbjct: 301 LPPLASLLHLPFTNATVSHIQLMVFGGLIIFFLIVEPHGLARLWQISKEKLRLWPFPH 358