BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.4749.p (293 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775973.1| amino acid ABC transporter ATPase [Herbaspir... 565 e-159 ref|YP_004753211.1| ABC transporter-like protein [Collimonas fun... 496 e-138 ref|ZP_08275631.1| ABC transporter ATP-binding protein [Oxalobac... 466 e-129 ref|YP_004684146.1| high-affinity branched-chain amino acid tran... 462 e-128 ref|YP_001795620.1| transporter (ABC superfamily, ATP_bind) [Cup... 461 e-128 >ref|YP_003775973.1| amino acid ABC transporter ATPase [Herbaspirillum seropedicae SmR1] gb|ADJ64065.1| ABC-type amino acid transport system protein, ATPase component protein [Herbaspirillum seropedicae SmR1] Length = 293 Score = 565 bits (1456), Expect = e-159, Method: Composition-based stats. Identities = 280/293 (95%), Positives = 286/293 (97%) Query: 1 MNPTMKRHLSSEILPAGLPPVTSPDDEAPAVAANGRRIGEVILDLQNISLSFGGVKALTD 60 MN TMKRHLSSEILP+GLPPV SPDDEAPAVAANGRRIGEVILDLQNISLSFGGVKALTD Sbjct: 1 MNTTMKRHLSSEILPSGLPPVASPDDEAPAVAANGRRIGEVILDLQNISLSFGGVKALTD 60 Query: 61 ISFDVREHEIRAIIGPNGAGKSSMINVINGVYHPQKGSILYRGQPRLGMHPSSIARQGIA 120 ISFDVREHEIRAIIGPNGAGKSSMINVINGVYHPQKG ILYRGQPR GMHPS+IARQGIA Sbjct: 61 ISFDVREHEIRAIIGPNGAGKSSMINVINGVYHPQKGRILYRGQPRAGMHPSAIARQGIA 120 Query: 121 RTFQNIALFKGMTVLDNIMTGRNTKMRSGLFSNALWWGAARNEEIEHRRKVEEVIDFLEI 180 RTFQNIALFKGMTVLDNIMTGRNTKMRSGL SNA+WWGAARNEEIEHRRKVE+VIDFLEI Sbjct: 121 RTFQNIALFKGMTVLDNIMTGRNTKMRSGLLSNAMWWGAARNEEIEHRRKVEQVIDFLEI 180 Query: 181 QHIRKTPVGRLPYGLQKRVELARALAAEPHMLLLDEPMAGMNVEEKQDMCRFILDVNDQF 240 QHIRKTPVGRLPYGLQKRVELARALAAEPHMLLLDEPMAGMNVEEKQDMCRFILDVNDQF Sbjct: 181 QHIRKTPVGRLPYGLQKRVELARALAAEPHMLLLDEPMAGMNVEEKQDMCRFILDVNDQF 240 Query: 241 GTTIVLIEHDMGVVMDISDRVVVLDYGKKIGDGTPDEVMSNPEVIKAYLGTSH 293 GTTIVLIEHDMGVVMDISDRVVVLDYGKKIGDGTP+EVM N +VIKAYLGTSH Sbjct: 241 GTTIVLIEHDMGVVMDISDRVVVLDYGKKIGDGTPEEVMGNEDVIKAYLGTSH 293 >ref|YP_004753211.1| ABC transporter-like protein [Collimonas fungivorans Ter331] gb|AEK62388.1| ABC transporter related protein [Collimonas fungivorans Ter331] Length = 296 Score = 496 bits (1278), Expect = e-138, Method: Composition-based stats. Identities = 246/293 (83%), Positives = 265/293 (90%) Query: 1 MNPTMKRHLSSEILPAGLPPVTSPDDEAPAVAANGRRIGEVILDLQNISLSFGGVKALTD 60 M+ MKRH ++E+LPA P+ + V R IGEV+LDLQNISLSFGGVKALTD Sbjct: 4 MSAIMKRHAAAEVLPAEPAPLAALHKPEQQVMGRERNIGEVVLDLQNISLSFGGVKALTD 63 Query: 61 ISFDVREHEIRAIIGPNGAGKSSMINVINGVYHPQKGSILYRGQPRLGMHPSSIARQGIA 120 ISF+V+EHEIRAIIGPNGAGKSSMINVINGVYHPQKGSI++ G PR MHPS +ARQGIA Sbjct: 64 ISFNVKEHEIRAIIGPNGAGKSSMINVINGVYHPQKGSIVFHGVPRHSMHPSKVARQGIA 123 Query: 121 RTFQNIALFKGMTVLDNIMTGRNTKMRSGLFSNALWWGAARNEEIEHRRKVEEVIDFLEI 180 RTFQNIALFKGMTVLDNIMTGRNTKM SGL +NA+WWG ARNEE++HRRKVEEVIDFLEI Sbjct: 124 RTFQNIALFKGMTVLDNIMTGRNTKMHSGLLANAIWWGRARNEEMQHRRKVEEVIDFLEI 183 Query: 181 QHIRKTPVGRLPYGLQKRVELARALAAEPHMLLLDEPMAGMNVEEKQDMCRFILDVNDQF 240 QHIRKTPVGRLPYGLQKRVELARALAAEP MLLLDEPMAGMNVEEKQDMCRFILDVNDQF Sbjct: 184 QHIRKTPVGRLPYGLQKRVELARALAAEPSMLLLDEPMAGMNVEEKQDMCRFILDVNDQF 243 Query: 241 GTTIVLIEHDMGVVMDISDRVVVLDYGKKIGDGTPDEVMSNPEVIKAYLGTSH 293 G+TIVLIEHDMGVVMDISDRVVVLDYGKKIGDGTPDEVM+NPEVIKAYLG+SH Sbjct: 244 GSTIVLIEHDMGVVMDISDRVVVLDYGKKIGDGTPDEVMNNPEVIKAYLGSSH 296 >ref|ZP_08275631.1| ABC transporter ATP-binding protein [Oxalobacteraceae bacterium IMCC9480] gb|EGF30896.1| ABC transporter ATP-binding protein [Oxalobacteraceae bacterium IMCC9480] Length = 262 Score = 466 bits (1198), Expect = e-129, Method: Composition-based stats. Identities = 225/258 (87%), Positives = 244/258 (94%) Query: 36 RRIGEVILDLQNISLSFGGVKALTDISFDVREHEIRAIIGPNGAGKSSMINVINGVYHPQ 95 R+ G+VIL LQNISL+FGGVKALTDISFDV+EHEIRAIIGPNGAGKSSM+NVINGVYHPQ Sbjct: 5 RQTGDVILSLQNISLAFGGVKALTDISFDVKEHEIRAIIGPNGAGKSSMLNVINGVYHPQ 64 Query: 96 KGSILYRGQPRLGMHPSSIARQGIARTFQNIALFKGMTVLDNIMTGRNTKMRSGLFSNAL 155 G I + G+ R M+P+ +A QGIARTFQNIALFKGMTVLDNIMTGRNT+MRSGLF++AL Sbjct: 65 HGDITFHGEKRHAMNPTRVAHQGIARTFQNIALFKGMTVLDNIMTGRNTRMRSGLFAHAL 124 Query: 156 WWGAARNEEIEHRRKVEEVIDFLEIQHIRKTPVGRLPYGLQKRVELARALAAEPHMLLLD 215 WWG ARNEEIEHR++VEEVIDFLEIQHIRKTPVGRLPYGLQKRVELARALAAEP +LLLD Sbjct: 125 WWGPARNEEIEHRKRVEEVIDFLEIQHIRKTPVGRLPYGLQKRVELARALAAEPSLLLLD 184 Query: 216 EPMAGMNVEEKQDMCRFILDVNDQFGTTIVLIEHDMGVVMDISDRVVVLDYGKKIGDGTP 275 EPMAGMNVEEKQDMCRF+LDVNDQFGTTIVLIEHDMGVVMDISDRVVVLDYGKKIGDGTP Sbjct: 185 EPMAGMNVEEKQDMCRFVLDVNDQFGTTIVLIEHDMGVVMDISDRVVVLDYGKKIGDGTP 244 Query: 276 DEVMSNPEVIKAYLGTSH 293 EVM+NP+VIKAYLGTSH Sbjct: 245 AEVMANPDVIKAYLGTSH 262 >ref|YP_004684146.1| high-affinity branched-chain amino acid transport ATP-binding protein LivG [Cupriavidus necator N-1] gb|AEI75665.1| high-affinity branched-chain amino acid transport ATP-binding protein LivG [Cupriavidus necator N-1] Length = 320 Score = 462 bits (1190), Expect = e-128, Method: Composition-based stats. Identities = 234/290 (80%), Positives = 251/290 (86%), Gaps = 9/290 (3%) Query: 13 ILPAG-LPPVTSPDD--------EAPAVAANGRRIGEVILDLQNISLSFGGVKALTDISF 63 I PAG + P DD A R GEVILDLQ+ISLSFGGVKALTDISF Sbjct: 31 IAPAGPMSPAGLADDSGAHPGTQRAQRTGEQARTGGEVILDLQHISLSFGGVKALTDISF 90 Query: 64 DVREHEIRAIIGPNGAGKSSMINVINGVYHPQKGSILYRGQPRLGMHPSSIARQGIARTF 123 DV EHE+RAIIGPNGAGKSSM+NVINGVYHPQ+G I++RG+ R MHP++ ARQGIARTF Sbjct: 91 DVCEHEVRAIIGPNGAGKSSMLNVINGVYHPQQGRIVFRGEERKQMHPTAAARQGIARTF 150 Query: 124 QNIALFKGMTVLDNIMTGRNTKMRSGLFSNALWWGAARNEEIEHRRKVEEVIDFLEIQHI 183 QNIALFKGMTVLDNIMTGRNT+ R+GLF++ALWWG ARNEE+ HR+KVEEVIDFLEIQ I Sbjct: 151 QNIALFKGMTVLDNIMTGRNTQFRTGLFAHALWWGPARNEEMRHRQKVEEVIDFLEIQSI 210 Query: 184 RKTPVGRLPYGLQKRVELARALAAEPHMLLLDEPMAGMNVEEKQDMCRFILDVNDQFGTT 243 RKTPVGRLPYGLQKRVELARALAAEP MLLLDEPMAGMNVEEKQDMCRFILDVN QFGTT Sbjct: 211 RKTPVGRLPYGLQKRVELARALAAEPSMLLLDEPMAGMNVEEKQDMCRFILDVNRQFGTT 270 Query: 244 IVLIEHDMGVVMDISDRVVVLDYGKKIGDGTPDEVMSNPEVIKAYLGTSH 293 IVLIEHDMGVVMDISDRVVVLDYGKKIGDGTPDEV NP+VIKAYLGTSH Sbjct: 271 IVLIEHDMGVVMDISDRVVVLDYGKKIGDGTPDEVKGNPDVIKAYLGTSH 320 >ref|YP_001795620.1| transporter (ABC superfamily, ATP_bind) [Cupriavidus taiwanensis LMG 19424] emb|CAP62898.1| putative transport protein (ABC superfamily, atp_bind) [Cupriavidus taiwanensis LMG 19424] Length = 320 Score = 461 bits (1187), Expect = e-128, Method: Composition-based stats. Identities = 230/284 (80%), Positives = 247/284 (86%), Gaps = 8/284 (2%) Query: 18 LPPVTSPDD--------EAPAVAANGRRIGEVILDLQNISLSFGGVKALTDISFDVREHE 69 LPP DD A A R GEVILDLQ+ISLSFGGVKALTDISFDV EHE Sbjct: 37 LPPAGLADDSGVHPGTRHAQRTGAQARTGGEVILDLQHISLSFGGVKALTDISFDVCEHE 96 Query: 70 IRAIIGPNGAGKSSMINVINGVYHPQKGSILYRGQPRLGMHPSSIARQGIARTFQNIALF 129 +RAIIGPNGAGKSSM+NVINGVYHPQ+G I++RG+ R MHP++ ARQGIARTFQNIALF Sbjct: 97 VRAIIGPNGAGKSSMLNVINGVYHPQQGRIVFRGEERKQMHPTAAARQGIARTFQNIALF 156 Query: 130 KGMTVLDNIMTGRNTKMRSGLFSNALWWGAARNEEIEHRRKVEEVIDFLEIQHIRKTPVG 189 KGMTVLDNIMTGRNT+ R+ F++ALWWG ARNEE+ HR+KVEEVIDFLEIQ IRKTPVG Sbjct: 157 KGMTVLDNIMTGRNTQFRTSWFAHALWWGPARNEEMRHRQKVEEVIDFLEIQSIRKTPVG 216 Query: 190 RLPYGLQKRVELARALAAEPHMLLLDEPMAGMNVEEKQDMCRFILDVNDQFGTTIVLIEH 249 RLPYGLQKRVELARALAAEP MLLLDEPMAGMNVEEKQDMCRFILDVN QFGTTIVLIEH Sbjct: 217 RLPYGLQKRVELARALAAEPSMLLLDEPMAGMNVEEKQDMCRFILDVNRQFGTTIVLIEH 276 Query: 250 DMGVVMDISDRVVVLDYGKKIGDGTPDEVMSNPEVIKAYLGTSH 293 DMGVVMDISDRVVVLDYGKKIGDGTP+EV NP+VIKAYLGTSH Sbjct: 277 DMGVVMDISDRVVVLDYGKKIGDGTPEEVKGNPDVIKAYLGTSH 320