BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.4735.p (547 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_07673944.1| methyl-accepting chemotaxis protein I [Ralsto... 491 e-136 ref|NP_522922.1| methyl-accepting chemotaxis transducer transmem... 483 e-134 ref|YP_001862396.1| methyl-accepting chemotaxis sensory transduc... 478 e-132 ref|YP_004230814.1| methyl-accepting chemotaxis sensory transduc... 475 e-132 ref|ZP_02884284.1| methyl-accepting chemotaxis sensory transduce... 475 e-132 >ref|ZP_07673944.1| methyl-accepting chemotaxis protein I [Ralstonia sp. 5_7_47FAA] gb|EFP67619.1| methyl-accepting chemotaxis protein I [Ralstonia sp. 5_7_47FAA] Length = 546 Score = 491 bits (1263), Expect = e-136, Method: Composition-based stats. Identities = 310/526 (58%), Positives = 400/526 (76%), Gaps = 5/526 (0%) Query: 1 MKLANFNIGVRLGGAFAVVLLLIMVTAMVGVRNQSSNNAEINSIVNEKYQLIALSNQIKN 60 M++++ IGVRLG AFA+V+ L++ TA VG++ NN ++ IV+E+Y LIALSNQIKN Sbjct: 4 MRISDMKIGVRLGAAFALVVALLIGTAAVGIQRLDDNNTKMGRIVSERYSLIALSNQIKN 63 Query: 61 NGYKANAVLSNILLATTPEASAKYMDEYAGLRKANTEAYKQLEGMLDSDKTKALYAEQTT 120 NGYKAN +LSN+LLAT+ + AKYM++YA +R+AN +AY +LE ML +D +KAL+ EQ Sbjct: 64 NGYKANGILSNLLLATSADQKAKYMNDYAAIRQANGQAYGRLEKMLTTDASKALFKEQFE 123 Query: 121 ARSAYGVAVRKFFELMKTGERAEATTLFQGDLARLQTEYFVMVDKMVNSLAQEMVEDSRQ 180 ARSAYG +VRKFFEL+ + +A L+QGD++RLQ +Y+V+VDKMV+ A EM D + Sbjct: 124 ARSAYGASVRKFFELIDANKPEDARVLYQGDMSRLQDQYYVLVDKMVDHQASEMEHDVGE 183 Query: 181 VAEDGHLAVIQMIVLAAVAVVLASVIGVLITRSITAPVRHAVVLAEAVAQGDLSYRLNAA 240 A G A IQMIVLA +A +LA G ITR+IT P+ AV LAEAVAQGDL++RL Sbjct: 184 AAAQGANAKIQMIVLAVLATLLAIATGGFITRTITGPIHRAVHLAEAVAQGDLTHRLEVG 243 Query: 241 GKDEISRLLQALQHMSDNLHDTVSNVRNGTSAIDMAARELAQGNLSLSDRTEQQASSLEE 300 +DEI RLL AL+HM++NLH V VR GT I A+RE+A GN+ LS RTEQQASSLEE Sbjct: 244 AQDEIGRLLAALKHMTENLHGIVGRVRGGTDTITRASREVASGNIDLSSRTEQQASSLEE 303 Query: 301 TASAMEQLTSAVRQNADNARQASELAVSASDVAVRGGASVEQVVNIMTAISTSSGKIADI 360 TA+AMEQLTS V+QNADNA++AS LA +AS VA +GG +V + + M+ I+ SS KI DI Sbjct: 304 TAAAMEQLTSTVKQNADNAQEASRLASNASLVAAKGGDAVGEAIETMSTINASSRKIVDI 363 Query: 361 ITVIDGIAFQTNLLALNAAVEAARAGEHGRGFAVVASEVRGLAQRSAVAAKEIKSLIEGS 420 I VID IAFQTN+LALNAAVEAARAGE GRGFAVVA EVR LAQRSA AAKEIK LIE S Sbjct: 364 IGVIDSIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRNLAQRSAAAAKEIKGLIEDS 423 Query: 421 VGHVKAGSNIVEQTVATIDEVIASIKHATDLITDISASSKEQSEGIEQINQAISQMDQMT 480 V HV G+ VE+ I +V+A I++ T+++ +ISASS+EQSEGIEQIN+AI+QMD++T Sbjct: 424 VNHVGTGTAKVEEAGQIIRDVVAGIQNVTNIVAEISASSREQSEGIEQINEAITQMDKVT 483 Query: 481 QENSALVEQNAAASQALQSQAEQLSALMGRFRLSELLANGQAGGHA 526 QEN++LVE++A ++QALQ QA+QL+ ++ FRL +G GHA Sbjct: 484 QENASLVEESATSAQALQDQADQLAEMVSAFRL-----HGDMPGHA 524 >ref|NP_522922.1| methyl-accepting chemotaxis transducer transmembrane protein [Ralstonia solanacearum GMI1000] emb|CAD18514.1| probable methyl-accepting chemotaxis transducer transmembrane protein [Ralstonia solanacearum GMI1000] Length = 543 Score = 483 bits (1243), Expect = e-134, Method: Composition-based stats. Identities = 308/524 (58%), Positives = 398/524 (75%), Gaps = 1/524 (0%) Query: 1 MKLANFNIGVRLGGAFAVVLLLIMVTAMVGVRNQSSNNAEINSIVNEKYQLIALSNQIKN 60 M++++ IGVRLG AFA+V+ L++ A VG++ NN ++ IV+E+Y LIALSNQIKN Sbjct: 1 MRISDMRIGVRLGAAFALVVALLIGIAAVGIQRLDDNNTKMGQIVSERYSLIALSNQIKN 60 Query: 61 NGYKANAVLSNILLATTPEASAKYMDEYAGLRKANTEAYKQLEGMLDSDKTKALYAEQTT 120 NGYKAN +LSN+LL TTPE KYM +YA +R+AN +AY +LE +L +D+ KAL+ EQ Sbjct: 61 NGYKANGILSNLLLVTTPEQKTKYMSDYAAIRQANAQAYGRLEKLLTTDQGKALFKEQFD 120 Query: 121 ARSAYGVAVRKFFELMKTGERAEATTLFQGDLARLQTEYFVMVDKMVNSLAQEMVEDSRQ 180 ARSAYG +VRKFF L+ EA L+QGD++RLQ Y+V+VDKMV+ A EM D + Sbjct: 121 ARSAYGASVRKFFALVDADNVQEARALYQGDMSRLQDRYYVLVDKMVDHQAGEMEHDVSE 180 Query: 181 VAEDGHLAVIQMIVLAAVAVVLASVIGVLITRSITAPVRHAVVLAEAVAQGDLSYRLNAA 240 A G A IQMIVLA +A +LA G ITR+IT P+ HA+ LAEAVAQG+L++ L Sbjct: 181 AAAQGANAKIQMIVLAVLATLLAIATGAFITRTITRPINHAMHLAEAVAQGNLTHLLEVD 240 Query: 241 GKDEISRLLQALQHMSDNLHDTVSNVRNGTSAIDMAARELAQGNLSLSDRTEQQASSLEE 300 +DEI RLL AL+HM +NLH VS VR GT I A+ E+A GN+ LS RTEQQASSLEE Sbjct: 241 TQDEIGRLLAALKHMIENLHGIVSQVRGGTDTITRASSEVASGNIDLSSRTEQQASSLEE 300 Query: 301 TASAMEQLTSAVRQNADNARQASELAVSASDVAVRGGASVEQVVNIMTAISTSSGKIADI 360 TA+AMEQLTS V+QNADNA++AS LA +AS VA +GG +V++ + M+ I+TSS KI DI Sbjct: 301 TAAAMEQLTSTVKQNADNAQEASRLASNASMVATKGGDAVDEAIQTMSTINTSSRKIVDI 360 Query: 361 ITVIDGIAFQTNLLALNAAVEAARAGEHGRGFAVVASEVRGLAQRSAVAAKEIKSLIEGS 420 I VIDGIAFQTN+LALNAAVEAARAGE GRGFAVVA EVR LAQRSA AAKEIK+LIE S Sbjct: 361 IGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRSLAQRSAAAAKEIKALIEDS 420 Query: 421 VGHVKAGSNIVEQTVATIDEVIASIKHATDLITDISASSKEQSEGIEQINQAISQMDQMT 480 VGHV G+ VE+ I +V+A I++ T+++++ISASS+EQS+GIEQIN+AI+QMD+ T Sbjct: 421 VGHVSTGTAKVEEAGQIIRDVVAGIQNVTNIVSEISASSREQSDGIEQINEAITQMDKAT 480 Query: 481 QENSALVEQNAAASQALQSQAEQLSALMGRFRL-SELLANGQAG 523 QEN++LVE++A A+QALQ QA QL+ ++ F+L ++L G+A Sbjct: 481 QENASLVEESATAAQALQDQANQLADMVSTFKLHADLSGRGRAA 524 >ref|YP_001862396.1| methyl-accepting chemotaxis sensory transducer [Burkholderia phymatum STM815] gb|ACC75350.1| methyl-accepting chemotaxis sensory transducer [Burkholderia phymatum STM815] Length = 549 Score = 478 bits (1230), Expect = e-132, Method: Composition-based stats. Identities = 297/515 (57%), Positives = 391/515 (75%) Query: 1 MKLANFNIGVRLGGAFAVVLLLIMVTAMVGVRNQSSNNAEINSIVNEKYQLIALSNQIKN 60 M +AN IG RL AF +++ L++ T +VG+ + S++ +++IV E+Y LIALSNQIKN Sbjct: 1 MWIANLRIGARLSSAFVLIVALMIGTTVVGIEHLKSSSTRMDTIVGERYALIALSNQIKN 60 Query: 61 NGYKANAVLSNILLATTPEASAKYMDEYAGLRKANTEAYKQLEGMLDSDKTKALYAEQTT 120 NGY+ANA+LSN+LL +T + KYMD+YA +RK N +AY +LE +L SD KAL+ EQ Sbjct: 61 NGYRANAILSNLLLVSTEAQAKKYMDDYAVIRKTNADAYARLEKLLHSDDAKALFKEQFQ 120 Query: 121 ARSAYGVAVRKFFELMKTGERAEATTLFQGDLARLQTEYFVMVDKMVNSLAQEMVEDSRQ 180 AR+ YG +VRKFF+L+K + +A L+ GDLAR Q EY+V+VDKMV+ A +M D+ + Sbjct: 121 ARTVYGGSVRKFFDLVKENRQQDARDLYLGDLARQQDEYYVLVDKMVDYQAAQMQNDAAR 180 Query: 181 VAEDGHLAVIQMIVLAAVAVVLASVIGVLITRSITAPVRHAVVLAEAVAQGDLSYRLNAA 240 A++G A +QMI+L+ A++ A G +ITR IT P+ AV LAEAVAQGDL+ RL Sbjct: 181 AADEGGNARVQMILLSIGAILAAGATGFVITRGITRPIHRAVDLAEAVAQGDLTQRLETG 240 Query: 241 GKDEISRLLQALQHMSDNLHDTVSNVRNGTSAIDMAARELAQGNLSLSDRTEQQASSLEE 300 DEI RL AL++M +NLHD V VR GT I A+RE+A GN+ LS RTEQQAS+LE+ Sbjct: 241 SNDEIGRLQHALKNMIENLHDIVVRVRAGTETITRASREVASGNMDLSSRTEQQASALEQ 300 Query: 301 TASAMEQLTSAVRQNADNARQASELAVSASDVAVRGGASVEQVVNIMTAISTSSGKIADI 360 TA+AMEQLTS V+QN DNA +A+ +A+SAS+ A +GG +V +VV+ M+AI+ SS KI DI Sbjct: 301 TAAAMEQLTSTVKQNTDNALEANRVALSASETAAKGGQAVNRVVDTMSAINVSSRKIVDI 360 Query: 361 ITVIDGIAFQTNLLALNAAVEAARAGEHGRGFAVVASEVRGLAQRSAVAAKEIKSLIEGS 420 I VI+GIAFQTN+LALNAAVEAARAGEHGRGFAVVASEVR LAQRSAVAAKEIK+LI+ S Sbjct: 361 IGVIEGIAFQTNILALNAAVEAARAGEHGRGFAVVASEVRSLAQRSAVAAKEIKTLIDDS 420 Query: 421 VGHVKAGSNIVEQTVATIDEVIASIKHATDLITDISASSKEQSEGIEQINQAISQMDQMT 480 V HV GS IVE+ I EV++SI H T ++ ++S SS+EQS+GIEQIN+A++QMDQ+T Sbjct: 421 VSHVDDGSKIVEEAGQIIREVVSSIAHVTAIVGEMSTSSREQSDGIEQINRAVTQMDQVT 480 Query: 481 QENSALVEQNAAASQALQSQAEQLSALMGRFRLSE 515 QEN+ALVE++AAA+QAL QA QLS ++ F L + Sbjct: 481 QENAALVEESAAAAQALHEQAAQLSDMVAEFTLDD 515 >ref|YP_004230814.1| methyl-accepting chemotaxis sensory transducer [Burkholderia sp. CCGE1001] gb|ADX57754.1| methyl-accepting chemotaxis sensory transducer [Burkholderia sp. CCGE1001] Length = 546 Score = 475 bits (1223), Expect = e-132, Method: Composition-based stats. Identities = 307/513 (59%), Positives = 400/513 (77%) Query: 1 MKLANFNIGVRLGGAFAVVLLLIMVTAMVGVRNQSSNNAEINSIVNEKYQLIALSNQIKN 60 MK++N IGVRLG AFA++++L++ TA+VG+ + S N +++ IV+ +Y LIALSNQIK+ Sbjct: 1 MKISNLRIGVRLGSAFALMVVLLVGTAVVGIEHLESTNTKMDEIVSNRYTLIALSNQIKS 60 Query: 61 NGYKANAVLSNILLATTPEASAKYMDEYAGLRKANTEAYKQLEGMLDSDKTKALYAEQTT 120 NGYKAN +LSN+LL T+P+ + +YMD+YA +RKAN +AY +LE L SD+TKAL+ +Q Sbjct: 61 NGYKANGILSNLLLTTSPDRAKQYMDDYAAIRKANAQAYAELEKHLTSDETKALFKQQFD 120 Query: 121 ARSAYGVAVRKFFELMKTGERAEATTLFQGDLARLQTEYFVMVDKMVNSLAQEMVEDSRQ 180 ARSAYGV+V+ FF+L+ ++ EA ++QGD+ARLQ Y+V+VDKMV+ A+ M D Sbjct: 121 ARSAYGVSVKSFFDLVSKNQQQEARDVYQGDMARLQDAYYVLVDKMVDVQAERMAHDVAD 180 Query: 181 VAEDGHLAVIQMIVLAAVAVVLASVIGVLITRSITAPVRHAVVLAEAVAQGDLSYRLNAA 240 + H A +QMI+LA +A V+A + ITR+IT P+ AVVLAEAVA GDL+++L Sbjct: 181 AVAEAHRAKLQMILLALIATVIAIATAIFITRTITRPINRAVVLAEAVAAGDLTHQLQID 240 Query: 241 GKDEISRLLQALQHMSDNLHDTVSNVRNGTSAIDMAARELAQGNLSLSDRTEQQASSLEE 300 DE+ RLL AL+ M+ NLH V+ VR GT I A RE+A GN+ LS RTE QASSLEE Sbjct: 241 STDEVGRLLSALERMTGNLHGIVAQVRQGTDTISQATREVASGNMDLSSRTEHQASSLEE 300 Query: 301 TASAMEQLTSAVRQNADNARQASELAVSASDVAVRGGASVEQVVNIMTAISTSSGKIADI 360 TA+AMEQLTS V+QNADNAR+A++LA +ASDVAV+GG +V QVV+ M+AI+ SS +I +I Sbjct: 301 TAAAMEQLTSTVKQNADNAREANQLASNASDVAVKGGDAVNQVVSTMSAINESSRRIVEI 360 Query: 361 ITVIDGIAFQTNLLALNAAVEAARAGEHGRGFAVVASEVRGLAQRSAVAAKEIKSLIEGS 420 I VIDGIAFQTN+LALNAAVEAARAGEHGRGFAVVASEVRGLAQRSAVAAKEIK LI S Sbjct: 361 IGVIDGIAFQTNILALNAAVEAARAGEHGRGFAVVASEVRGLAQRSAVAAKEIKELIADS 420 Query: 421 VGHVKAGSNIVEQTVATIDEVIASIKHATDLITDISASSKEQSEGIEQINQAISQMDQMT 480 V V G +VE+ I EV+ SI+H T+++ +ISASSKEQSEGIEQIN A++QMD++T Sbjct: 421 VNQVGTGGKMVEEAGQIISEVVKSIRHVTEIVGEISASSKEQSEGIEQINHAVTQMDKVT 480 Query: 481 QENSALVEQNAAASQALQSQAEQLSALMGRFRL 513 QEN+ALVEQ+AAA+QALQ QA+QL+ + F+L Sbjct: 481 QENAALVEQSAAAAQALQDQAQQLTHTVSTFKL 513 >ref|ZP_02884284.1| methyl-accepting chemotaxis sensory transducer [Burkholderia graminis C4D1M] gb|EDT10288.1| methyl-accepting chemotaxis sensory transducer [Burkholderia graminis C4D1M] Length = 546 Score = 475 bits (1223), Expect = e-132, Method: Composition-based stats. Identities = 307/515 (59%), Positives = 400/515 (77%) Query: 1 MKLANFNIGVRLGGAFAVVLLLIMVTAMVGVRNQSSNNAEINSIVNEKYQLIALSNQIKN 60 MK++N IGVRLG AFA+++ L++ TA+VG+ + S N +++ IV+ +Y LIALSNQIK+ Sbjct: 1 MKISNLKIGVRLGSAFALMVALLVGTAVVGIEHLESTNTKMDEIVSNRYTLIALSNQIKS 60 Query: 61 NGYKANAVLSNILLATTPEASAKYMDEYAGLRKANTEAYKQLEGMLDSDKTKALYAEQTT 120 NGYKAN +LSN+LL T+P+ + +YMD+YA +RKAN +AY +LE L SD+T+AL+ +Q Sbjct: 61 NGYKANGILSNLLLTTSPDKAKQYMDDYAAIRKANAQAYAELEKHLTSDETRALFKQQFD 120 Query: 121 ARSAYGVAVRKFFELMKTGERAEATTLFQGDLARLQTEYFVMVDKMVNSLAQEMVEDSRQ 180 ARSAYGV+V+ FF+L+ ++ +A ++QGD+ARLQ Y+V+VDKMV+ A M D + Sbjct: 121 ARSAYGVSVKSFFDLVSKNQQQDARDVYQGDMARLQDAYYVLVDKMVDVQADRMARDVAE 180 Query: 181 VAEDGHLAVIQMIVLAAVAVVLASVIGVLITRSITAPVRHAVVLAEAVAQGDLSYRLNAA 240 + H A +QMI+LA A V+A G+ ITR+IT P+ AVVLAEAVA GDL++ L+ Sbjct: 181 AVAEAHNAKLQMILLALFATVIAIATGIFITRTITRPINRAVVLAEAVAAGDLTHHLHID 240 Query: 241 GKDEISRLLQALQHMSDNLHDTVSNVRNGTSAIDMAARELAQGNLSLSDRTEQQASSLEE 300 DE+ RLL AL+ M+ NLH V+ VR GT I A RE+A GN+ LS RTE QASSLEE Sbjct: 241 STDEVGRLLTALERMTGNLHGIVAQVRQGTDTISQATREVASGNMDLSSRTEHQASSLEE 300 Query: 301 TASAMEQLTSAVRQNADNARQASELAVSASDVAVRGGASVEQVVNIMTAISTSSGKIADI 360 TA+AME+LTS V+QNADNAR+A++LA SASDVAVRGG +V QVV+ MTAI+ SS +I +I Sbjct: 301 TAAAMEELTSTVKQNADNAREANQLASSASDVAVRGGEAVNQVVSTMTAINESSRRIVEI 360 Query: 361 ITVIDGIAFQTNLLALNAAVEAARAGEHGRGFAVVASEVRGLAQRSAVAAKEIKSLIEGS 420 I VIDGIAFQTN+LALNAAVEAARAGEHGRGFAVVASEVRGLAQRSAVAAKEIK LI S Sbjct: 361 IGVIDGIAFQTNILALNAAVEAARAGEHGRGFAVVASEVRGLAQRSAVAAKEIKELIADS 420 Query: 421 VGHVKAGSNIVEQTVATIDEVIASIKHATDLITDISASSKEQSEGIEQINQAISQMDQMT 480 V V G +VE+ I EV+ SI+H T+++ +IS+SSKEQSEGIEQIN A++QMD++T Sbjct: 421 VSQVGTGGKMVEEAGQIIGEVVKSIRHVTEIVAEISSSSKEQSEGIEQINHAVTQMDKVT 480 Query: 481 QENSALVEQNAAASQALQSQAEQLSALMGRFRLSE 515 QEN+ALVEQ+AAA+QALQ QA+QL+ + F+L + Sbjct: 481 QENAALVEQSAAAAQALQDQAQQLTQTVSTFKLDD 515