BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.4732.p (421 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775986.1| ATP-dependent protease ATP-binding specifici... 800 0.0 ref|YP_001100032.1| ATP-dependent protease ATP-binding subunit C... 753 0.0 ref|YP_001353222.1| ATP-dependent protease ATP-binding subunit C... 744 0.0 ref|ZP_08274874.1| ATP-dependent Clp protease ATP-binding subuni... 744 0.0 ref|YP_004753090.1| ATP-dependent Clp protease ATP-binding subun... 742 0.0 >ref|YP_003775986.1| ATP-dependent protease ATP-binding specificity subunit [Herbaspirillum seropedicae SmR1] gb|ADJ64078.1| ATP-dependent protease (ATP-binding specificity subunit) protein [Herbaspirillum seropedicae SmR1] Length = 421 Score = 800 bits (2066), Expect = 0.0, Method: Composition-based stats. Identities = 414/421 (98%), Positives = 419/421 (99%) Query: 1 MSEKKSSSGEKLLYCSFCGKSQHEVKKLIAGPSVFICDECIDLCNDIIRDEAASVESVTG 60 MSEKKSSSGEKLLYCSFCGKSQHEVKKLIAGPSVFICDECIDLCNDIIRDEAASVE+V G Sbjct: 1 MSEKKSSSGEKLLYCSFCGKSQHEVKKLIAGPSVFICDECIDLCNDIIRDEAASVENVAG 60 Query: 61 TKSDLPTPQEITDLLDQYVIGQATAKRILSVAVYNHYKRLKHLGKKDDVELAKSNILLVG 120 KSDLPTPQEIT+LLDQYVIGQATAKRILSVAVYNHYKRLKHLGKKDDVELAKSNILLVG Sbjct: 61 AKSDLPTPQEITELLDQYVIGQATAKRILSVAVYNHYKRLKHLGKKDDVELAKSNILLVG 120 Query: 121 PTGSGKTLLAQTLARMLNVPFVIADATTLTEAGYVGEDVENIIQKLLQNCNYEVEKAQKG 180 PTGSGKTLLAQTLARMLNVPFVIADATTLTEAGYVGEDVENIIQKLLQNCNYEVEKAQKG Sbjct: 121 PTGSGKTLLAQTLARMLNVPFVIADATTLTEAGYVGEDVENIIQKLLQNCNYEVEKAQKG 180 Query: 181 IVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASVPPQGGRKHPNQDFVQID 240 IVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASVPPQGGRKHPNQDFVQID Sbjct: 181 IVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASVPPQGGRKHPNQDFVQID 240 Query: 241 TTNIMFICGGAFDGLAKIISDRSEKSGIGFSASVKSQTQKSNSEVLLNAEPEDLVKFGLI 300 TTNIMFICGGAFDGLA+IISDRSEKSGIGFSASVKSQTQKSNSEVLLNAEPEDLVKFGLI Sbjct: 241 TTNIMFICGGAFDGLARIISDRSEKSGIGFSASVKSQTQKSNSEVLLNAEPEDLVKFGLI 300 Query: 301 PELVGRLPVIATLNELDEEALIQILVEPKNALIKQYAKLLQMEGAELEIRPAAMHAIAKK 360 PELVGRLPVIATLNELDE+ALIQIL+EPKNALIKQYAKLLQMEGAELEIRPAAMHAIAKK Sbjct: 301 PELVGRLPVIATLNELDEDALIQILIEPKNALIKQYAKLLQMEGAELEIRPAAMHAIAKK 360 Query: 361 ALARKTGARGLRSILEHALLDVMYELPSEQNVAKVVVDENTITNGAKPLLIYHDQPKVSG 420 ALARKTGARGLRSILEHALLDVMYELPSEQNVAKVVVDENTITNGAKPLLIYHDQPKVSG Sbjct: 361 ALARKTGARGLRSILEHALLDVMYELPSEQNVAKVVVDENTITNGAKPLLIYHDQPKVSG 420 Query: 421 G 421 G Sbjct: 421 G 421 >ref|YP_001100032.1| ATP-dependent protease ATP-binding subunit ClpX [Herminiimonas arsenicoxydans] sp|A4G5X0|CLPX_HERAR RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX emb|CAL61907.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Herminiimonas arsenicoxydans] Length = 422 Score = 753 bits (1943), Expect = 0.0, Method: Composition-based stats. Identities = 382/421 (90%), Positives = 410/421 (97%) Query: 1 MSEKKSSSGEKLLYCSFCGKSQHEVKKLIAGPSVFICDECIDLCNDIIRDEAASVESVTG 60 MSEKKSSSGEKLLYCSFCGKSQHEVKKLIAGPSVFICDECIDLCNDIIRDEA+SVE++TG Sbjct: 1 MSEKKSSSGEKLLYCSFCGKSQHEVKKLIAGPSVFICDECIDLCNDIIRDEASSVETLTG 60 Query: 61 TKSDLPTPQEITDLLDQYVIGQATAKRILSVAVYNHYKRLKHLGKKDDVELAKSNILLVG 120 ++DLPTPQE+ +LLDQYVIGQ +AKRILSVAVYNHYKRLKHLGKKDDVELAKSNILLVG Sbjct: 61 PRTDLPTPQELCELLDQYVIGQNSAKRILSVAVYNHYKRLKHLGKKDDVELAKSNILLVG 120 Query: 121 PTGSGKTLLAQTLARMLNVPFVIADATTLTEAGYVGEDVENIIQKLLQNCNYEVEKAQKG 180 PTGSGKTLLAQTLAR L+VPFVIADATTLTEAGYVGEDVENIIQKLLQNCNYEVE+AQKG Sbjct: 121 PTGSGKTLLAQTLARTLDVPFVIADATTLTEAGYVGEDVENIIQKLLQNCNYEVERAQKG 180 Query: 181 IVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASVPPQGGRKHPNQDFVQID 240 IVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASVPPQGGRKHPNQDFVQID Sbjct: 181 IVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASVPPQGGRKHPNQDFVQID 240 Query: 241 TTNIMFICGGAFDGLAKIISDRSEKSGIGFSASVKSQTQKSNSEVLLNAEPEDLVKFGLI 300 TTNIMFICGGAFDGLAKIIS+RSEKSGIGFSA+VKS+ ++S S+V+L+ EPEDL+KFGLI Sbjct: 241 TTNIMFICGGAFDGLAKIISERSEKSGIGFSATVKSREERSASQVMLDTEPEDLIKFGLI 300 Query: 301 PELVGRLPVIATLNELDEEALIQILVEPKNALIKQYAKLLQMEGAELEIRPAAMHAIAKK 360 PELVGRLPV+ATL ELDEEALIQIL+EPKNALIKQY+KLLQMEGAELEIRPAA+ AIAKK Sbjct: 301 PELVGRLPVVATLRELDEEALIQILLEPKNALIKQYSKLLQMEGAELEIRPAALQAIAKK 360 Query: 361 ALARKTGARGLRSILEHALLDVMYELPSEQNVAKVVVDENTITNGAKPLLIYHDQPKVSG 420 A+ARKTGARGLRSILEHALLDVMYELP+EQNV+KVV+DE TITNGAKPLLIYH+QPKVSG Sbjct: 361 AIARKTGARGLRSILEHALLDVMYELPNEQNVSKVVIDEGTITNGAKPLLIYHEQPKVSG 420 Query: 421 G 421 Sbjct: 421 A 421 >ref|YP_001353222.1| ATP-dependent protease ATP-binding subunit ClpX [Janthinobacterium sp. Marseille] sp|A6SY75|CLPX_JANMA RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX gb|ABR89187.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Janthinobacterium sp. Marseille] Length = 422 Score = 744 bits (1921), Expect = 0.0, Method: Composition-based stats. Identities = 378/421 (89%), Positives = 406/421 (96%) Query: 1 MSEKKSSSGEKLLYCSFCGKSQHEVKKLIAGPSVFICDECIDLCNDIIRDEAASVESVTG 60 MSEKKSSSGEKLLYCSFCGKSQHEVKKLIAGPSVFICDECIDLCNDIIRDEA+SVE+V G Sbjct: 1 MSEKKSSSGEKLLYCSFCGKSQHEVKKLIAGPSVFICDECIDLCNDIIRDEASSVETVAG 60 Query: 61 TKSDLPTPQEITDLLDQYVIGQATAKRILSVAVYNHYKRLKHLGKKDDVELAKSNILLVG 120 ++DLPTPQE+ +LLDQYVIGQ AKRILSVAVYNHYKRLKHLGKKDDVELAKSNILLVG Sbjct: 61 PRTDLPTPQELCELLDQYVIGQNPAKRILSVAVYNHYKRLKHLGKKDDVELAKSNILLVG 120 Query: 121 PTGSGKTLLAQTLARMLNVPFVIADATTLTEAGYVGEDVENIIQKLLQNCNYEVEKAQKG 180 PTGSGKTLLAQTLAR L+VPFVIADATTLTEAGYVGEDVENIIQKLLQNCNYEVE+AQKG Sbjct: 121 PTGSGKTLLAQTLARTLDVPFVIADATTLTEAGYVGEDVENIIQKLLQNCNYEVERAQKG 180 Query: 181 IVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASVPPQGGRKHPNQDFVQID 240 IVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASVPPQGGRKHPNQDFVQID Sbjct: 181 IVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASVPPQGGRKHPNQDFVQID 240 Query: 241 TTNIMFICGGAFDGLAKIISDRSEKSGIGFSASVKSQTQKSNSEVLLNAEPEDLVKFGLI 300 TTNIMFICGGAFDGLAKIIS+RSEKSGIGFSASVKS+ +++ S+V+++ EPEDL+KFGLI Sbjct: 241 TTNIMFICGGAFDGLAKIISERSEKSGIGFSASVKSREERTASQVMMDTEPEDLIKFGLI 300 Query: 301 PELVGRLPVIATLNELDEEALIQILVEPKNALIKQYAKLLQMEGAELEIRPAAMHAIAKK 360 PELVGRLPV+ATL ELDEEALIQIL+EPKNALIKQY+KLLQMEGAELEIRPAA+ AIAKK Sbjct: 301 PELVGRLPVVATLRELDEEALIQILLEPKNALIKQYSKLLQMEGAELEIRPAALQAIAKK 360 Query: 361 ALARKTGARGLRSILEHALLDVMYELPSEQNVAKVVVDENTITNGAKPLLIYHDQPKVSG 420 A+ARKTGARGLRSILEHALLDVM+ELP+EQNVAKVV+DE TI +GAKPLLIYH+Q KVSG Sbjct: 361 AIARKTGARGLRSILEHALLDVMFELPNEQNVAKVVIDEGTINHGAKPLLIYHEQAKVSG 420 Query: 421 G 421 Sbjct: 421 A 421 >ref|ZP_08274874.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Oxalobacteraceae bacterium IMCC9480] gb|EGF31662.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Oxalobacteraceae bacterium IMCC9480] Length = 422 Score = 744 bits (1920), Expect = 0.0, Method: Composition-based stats. Identities = 374/420 (89%), Positives = 408/420 (97%) Query: 1 MSEKKSSSGEKLLYCSFCGKSQHEVKKLIAGPSVFICDECIDLCNDIIRDEAASVESVTG 60 M++KKS++GEKLLYCSFCGKSQHEVKKLIAGPSVFICDECIDLCNDIIRDEA++VE+V G Sbjct: 1 MTDKKSTTGEKLLYCSFCGKSQHEVKKLIAGPSVFICDECIDLCNDIIRDEASTVETVAG 60 Query: 61 TKSDLPTPQEITDLLDQYVIGQATAKRILSVAVYNHYKRLKHLGKKDDVELAKSNILLVG 120 KS+LPTPQEI +LL QYVIGQ AKRILSVAVYNHYKRL+HLGKKDDVELAKSNILLVG Sbjct: 61 PKSELPTPQEICELLGQYVIGQDGAKRILSVAVYNHYKRLRHLGKKDDVELAKSNILLVG 120 Query: 121 PTGSGKTLLAQTLARMLNVPFVIADATTLTEAGYVGEDVENIIQKLLQNCNYEVEKAQKG 180 PTGSGKTLLAQTLARMLNVPFVIADATTLTEAGYVGEDVENIIQKLLQ CNY+VEKAQKG Sbjct: 121 PTGSGKTLLAQTLARMLNVPFVIADATTLTEAGYVGEDVENIIQKLLQACNYDVEKAQKG 180 Query: 181 IVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASVPPQGGRKHPNQDFVQID 240 IVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASVPPQGGRKHPNQDFVQID Sbjct: 181 IVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASVPPQGGRKHPNQDFVQID 240 Query: 241 TTNIMFICGGAFDGLAKIISDRSEKSGIGFSASVKSQTQKSNSEVLLNAEPEDLVKFGLI 300 TTNIMFICGGAFDGLAKI+S+RSEKSGIGFSASVKSQ+++S SE+LL AEPEDL+KFGLI Sbjct: 241 TTNIMFICGGAFDGLAKIVSNRSEKSGIGFSASVKSQSERSASEMLLEAEPEDLIKFGLI 300 Query: 301 PELVGRLPVIATLNELDEEALIQILVEPKNALIKQYAKLLQMEGAELEIRPAAMHAIAKK 360 PELVGRLPV+ATL+EL E+A+IQIL+EPKNALIKQYA+LLQMEGAELE+RPAA+ AIA+K Sbjct: 301 PELVGRLPVVATLSELTEDAMIQILLEPKNALIKQYARLLQMEGAELEVRPAALQAIARK 360 Query: 361 ALARKTGARGLRSILEHALLDVMYELPSEQNVAKVVVDENTITNGAKPLLIYHDQPKVSG 420 AL RKTGARGLRSILEHALLDVM+ELP++QNV+KVV+DENTITNGAKPL+IYHDQPKV+G Sbjct: 361 ALQRKTGARGLRSILEHALLDVMFELPNQQNVSKVVIDENTITNGAKPLMIYHDQPKVAG 420 >ref|YP_004753090.1| ATP-dependent Clp protease ATP-binding subunit clpX [Collimonas fungivorans Ter331] gb|AEK62267.1| ATP-dependent Clp protease ATP-binding subunit clpX [Collimonas fungivorans Ter331] Length = 422 Score = 742 bits (1915), Expect = 0.0, Method: Composition-based stats. Identities = 377/421 (89%), Positives = 408/421 (96%) Query: 1 MSEKKSSSGEKLLYCSFCGKSQHEVKKLIAGPSVFICDECIDLCNDIIRDEAASVESVTG 60 MS+KKSSSGEKLLYCSFCGKSQHEVKKLIAGPSVFICDECIDLCNDII DEA++VE++ G Sbjct: 1 MSDKKSSSGEKLLYCSFCGKSQHEVKKLIAGPSVFICDECIDLCNDIITDEASNVETLDG 60 Query: 61 TKSDLPTPQEITDLLDQYVIGQATAKRILSVAVYNHYKRLKHLGKKDDVELAKSNILLVG 120 KS+LP PQEI++LLDQYVIGQ AKRILSVAVYNHYKRLKHLGKKDD+ELAKSNILLVG Sbjct: 61 QKSELPIPQEISELLDQYVIGQEPAKRILSVAVYNHYKRLKHLGKKDDIELAKSNILLVG 120 Query: 121 PTGSGKTLLAQTLARMLNVPFVIADATTLTEAGYVGEDVENIIQKLLQNCNYEVEKAQKG 180 PTGSGKTLLAQTLARMLNVPFVIADATTLTEAGYVGEDVENIIQKLLQNCNYEVEKAQ+G Sbjct: 121 PTGSGKTLLAQTLARMLNVPFVIADATTLTEAGYVGEDVENIIQKLLQNCNYEVEKAQRG 180 Query: 181 IVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASVPPQGGRKHPNQDFVQID 240 IVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASVPPQGGRKHPNQDFVQID Sbjct: 181 IVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASVPPQGGRKHPNQDFVQID 240 Query: 241 TTNIMFICGGAFDGLAKIISDRSEKSGIGFSASVKSQTQKSNSEVLLNAEPEDLVKFGLI 300 TTNI+FICGGAFDGLAKIIS+RSEKSGIGFSA+VKSQ+Q+++SEVLL+AEPEDL +FGLI Sbjct: 241 TTNILFICGGAFDGLAKIISERSEKSGIGFSANVKSQSQRTSSEVLLDAEPEDLTRFGLI 300 Query: 301 PELVGRLPVIATLNELDEEALIQILVEPKNALIKQYAKLLQMEGAELEIRPAAMHAIAKK 360 PELVGRLPVIATL EL+EEALI+IL+ PKNAL+KQY+KLLQMEGAELEIRPAA+ AIAK+ Sbjct: 301 PELVGRLPVIATLAELNEEALIEILIAPKNALVKQYSKLLQMEGAELEIRPAALQAIAKR 360 Query: 361 ALARKTGARGLRSILEHALLDVMYELPSEQNVAKVVVDENTITNGAKPLLIYHDQPKVSG 420 ALARKTGARGLRSILEH LLDVMY+LPS+QNVAKVVVDENT+ +GAKPLLIYH+QPKVSG Sbjct: 361 ALARKTGARGLRSILEHVLLDVMYDLPSQQNVAKVVVDENTVNSGAKPLLIYHEQPKVSG 420 Query: 421 G 421 Sbjct: 421 A 421