BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.4726.p         (104 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001631060.1| hypothetical protein Bpet2450 [Bordetella pe...   107   5e-22
ref|ZP_02360374.1| hypothetical protein BoklE_33197 [Burkholderi...   104   4e-21
ref|ZP_03456605.1| conserved hypothetical protein [Burkholderia ...   103   1e-20
ref|ZP_02510372.1| hypothetical protein BpseBC_32292 [Burkholder...   102   1e-20
ref|ZP_02407404.1| hypothetical protein BpseD_34440 [Burkholderi...   102   3e-20

>ref|YP_001631060.1| hypothetical protein Bpet2450 [Bordetella petrii DSM 12804]
 emb|CAP42792.1| conserved hypothetical protein [Bordetella petrii]
          Length = 574

 Score =  107 bits (267), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 51/73 (69%), Positives = 61/73 (83%), Gaps = 1/73 (1%)

Query: 1  MFNRYYEDELNKLKGLAVEFAQNNPALAPML-SGSSADPDVERLLEGVAFLTGLTRQKLD 59
          M NRYYE EL  L+ LA EFA +NPALAP+L +GS++DPDVERLLEGVAF+TGL R +LD
Sbjct: 1  MLNRYYEQELGYLRTLAAEFAASNPALAPLLGAGSASDPDVERLLEGVAFMTGLMRHRLD 60

Query: 60 DEFPEFVQELANL 72
          D+FPEF+Q LA L
Sbjct: 61 DDFPEFIQNLAQL 73


>ref|ZP_02360374.1| hypothetical protein BoklE_33197 [Burkholderia oklahomensis
          EO147]
          Length = 578

 Score =  104 bits (260), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 52/71 (73%), Positives = 56/71 (78%)

Query: 2  FNRYYEDELNKLKGLAVEFAQNNPALAPMLSGSSADPDVERLLEGVAFLTGLTRQKLDDE 61
           NRYYEDEL +L+ LAVEF + +P LAPML   S DPDVERLLEGVAFLTGL RQKLDD 
Sbjct: 7  LNRYYEDELFRLRELAVEFGRAHPLLAPMLGAPSGDPDVERLLEGVAFLTGLARQKLDDG 66

Query: 62 FPEFVQELANL 72
           PE VQ LANL
Sbjct: 67 LPELVQGLANL 77


>ref|ZP_03456605.1| conserved hypothetical protein [Burkholderia pseudomallei 576]
 gb|EEC31742.1| conserved hypothetical protein [Burkholderia pseudomallei 576]
          Length = 580

 Score =  103 bits (256), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 51/70 (72%), Positives = 56/70 (80%)

Query: 3  NRYYEDELNKLKGLAVEFAQNNPALAPMLSGSSADPDVERLLEGVAFLTGLTRQKLDDEF 62
          NRYYEDEL +L+ LA EFA+ +P LAPML   S DPDVERLLEGVAFLTGL RQKLD+  
Sbjct: 7  NRYYEDELVRLRELAAEFARAHPLLAPMLGAPSGDPDVERLLEGVAFLTGLARQKLDEGL 66

Query: 63 PEFVQELANL 72
          PE VQ LANL
Sbjct: 67 PELVQALANL 76


>ref|ZP_02510372.1| hypothetical protein BpseBC_32292 [Burkholderia pseudomallei
          BCC215]
          Length = 481

 Score =  102 bits (255), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 51/70 (72%), Positives = 56/70 (80%)

Query: 3  NRYYEDELNKLKGLAVEFAQNNPALAPMLSGSSADPDVERLLEGVAFLTGLTRQKLDDEF 62
          NRYYEDEL +L+ LA EFA+ +P LAPML   S DPDVERLLEGVAFLTGL RQKLD+  
Sbjct: 7  NRYYEDELVRLRELAAEFARAHPLLAPMLGAPSGDPDVERLLEGVAFLTGLARQKLDEGL 66

Query: 63 PEFVQELANL 72
          PE VQ LANL
Sbjct: 67 PELVQALANL 76


>ref|ZP_02407404.1| hypothetical protein BpseD_34440 [Burkholderia pseudomallei DM98]
          Length = 200

 Score =  102 bits (253), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 51/70 (72%), Positives = 56/70 (80%)

Query: 3  NRYYEDELNKLKGLAVEFAQNNPALAPMLSGSSADPDVERLLEGVAFLTGLTRQKLDDEF 62
          NRYYEDEL +L+ LA EFA+ +P LAPML   S DPDVERLLEGVAFLTGL RQKLD+  
Sbjct: 7  NRYYEDELVRLRELAAEFARAHPLLAPMLGAPSGDPDVERLLEGVAFLTGLARQKLDEGL 66

Query: 63 PEFVQELANL 72
          PE VQ LANL
Sbjct: 67 PELVQALANL 76