BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.4724.p         (297 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_004677258.1| hypothetical protein HYPMC_3481 [Hyphomicrob...   306   2e-81

>ref|YP_004677258.1| hypothetical protein HYPMC_3481 [Hyphomicrobium sp. MC1]
 emb|CCB66692.1| protein of unknown function [Hyphomicrobium sp. MC1]
          Length = 324

 Score =  306 bits (785), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 163/292 (55%), Positives = 195/292 (66%)

Query: 2   YFIGLTQQAATGGLARLNQGNGAVLPASHVYPGRHSFREFIAPIERRLQADPGVERFSVE 61
           YF+G++ Q A GGLARL   +G VLPAS VYP R  F +F+ PI   L+ D  V+  ++ 
Sbjct: 20  YFVGVSPQRAAGGLARLVARDGHVLPASRVYPNRADFTKFVHPIVEVLKCDAHVDAVALG 79

Query: 62  SVLGRYGISQELSVGLEVWAQAHFNTPAFVEVVFRQAEAAQQLDAFVARTLEPDEWTDNA 121
            VLGRYGISQELSVGLE+ A   FN  A V  VFRQA  A Q DAFVAR L  DEWTDNA
Sbjct: 80  LVLGRYGISQELSVGLELQAGGGFNAAALVTSVFRQARWAGQTDAFVARALPADEWTDNA 139

Query: 122 RPGLTVLFEHPVRIGQLAPLRKAVLEFPGDGWPIDGFTTIPAPGHGVAMVRGLRYVFLPE 181
           RP LT+ F  P RI  L PLR  V +FPGDGWPIDGFTTIP     + MV+GLRY+FLPE
Sbjct: 140 RPSLTIRFCEPQRIAALGPLRDRVTQFPGDGWPIDGFTTIPVGSETIGMVQGLRYIFLPE 199

Query: 182 ISVRWDGALRERLSTSLIEIEIILIDQATKIGRLSRRLTQLPNVERAYLNWFDVIVGGQE 241
           IS+RWD ALR RL+    EI+IIL+DQA KIGR+ R L+ +P V  A L WFDVIVGG E
Sbjct: 200 ISIRWDMALRARLAEDPEEIDIILLDQAGKIGRMCRELSTMPMVADARLQWFDVIVGGNE 259

Query: 242 NYGTLIERLHAQSSLASPALPSMARTPFSEMIGLTSSTVLQERLAIVSDTAA 293
           +Y   I  L  + +  S    SM R PFSE++ L S  VL++RL +  +  A
Sbjct: 260 DYDITIATLAREITARSAVETSMTRKPFSEILNLCSVGVLRQRLGLFEEVRA 311