BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.4716.p (230 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_02366160.1| hypothetical protein BoklC_25853 [Burkholderi... 148 8e-34 ref|ZP_02359091.1| hypothetical protein BoklE_26704 [Burkholderi... 147 1e-33 ref|ZP_02466825.1| hypothetical protein Bpse38_25939 [Burkholder... 146 3e-33 ref|ZP_02370342.1| hypothetical protein BthaT_04996 [Burkholderi... 140 1e-31 ref|YP_439053.1| hypothetical protein BTH_II0856 [Burkholderia t... 140 1e-31 >ref|ZP_02366160.1| hypothetical protein BoklC_25853 [Burkholderia oklahomensis C6786] Length = 232 Score = 148 bits (373), Expect = 8e-34, Method: Composition-based stats. Identities = 89/227 (39%), Positives = 128/227 (56%), Gaps = 7/227 (3%) Query: 2 MRLLDCFISLLAQIRQFQRQPLGDPAALSAQLDAAIAQARRAGQDAGHADADIEEALFAV 61 M+L D + L+A RQF + P GD A ++ + D I AR AG ++ D+++ALFAV Sbjct: 1 MKLSDSMMPLVAYARQFTQHPRGDAAEVALRFDILIDGARDHAACAGASETDVDDALFAV 60 Query: 62 LALADEIILATDWLGRAEWQRRLLQRRYFGITNAGVAFYTRLDALDAARSGVREVYFLCL 121 A DE +L + W W RLLQ+RYFG ++AGV F+ R++ LD R+ V EV+ LCL Sbjct: 61 CAWIDEALLNSGWDDADRWTLRLLQKRYFGTSHAGVEFFERIETLDGERADVLEVFLLCL 120 Query: 122 SLGFAGRYGYDRNQKALTDIKRSNLELLLQDEDGLPAEAGRLLFPDGYGAALQPGEPERK 181 LGF GRYGYD + + L I+R +E L + G FP Y G + Sbjct: 121 RLGFRGRYGYDGDSRPLEAIQRRAIEAL--SAEAASRADGEPPFPAAY-----TGIESQA 173 Query: 182 PVRSRRRWKLSSFAFNAMLLPLLVLVVLYGIYHVIIWQVVNTILPQI 228 V R + FA + LPL +L+ LY IYH++I ++V+++LP I Sbjct: 174 TVAKARAHRRIGFAGLNVGLPLAILLSLYLIYHIVIARMVDSVLPII 220 >ref|ZP_02359091.1| hypothetical protein BoklE_26704 [Burkholderia oklahomensis EO147] Length = 232 Score = 147 bits (372), Expect = 1e-33, Method: Composition-based stats. Identities = 88/227 (38%), Positives = 127/227 (55%), Gaps = 7/227 (3%) Query: 2 MRLLDCFISLLAQIRQFQRQPLGDPAALSAQLDAAIAQARRAGQDAGHADADIEEALFAV 61 M+L D + L+A RQF + P GD A ++ + D I AR AG ++ D+++ALFAV Sbjct: 1 MKLSDSMMPLVAYARQFTQHPRGDAAEVALRFDILIDGARDHAACAGASETDVDDALFAV 60 Query: 62 LALADEIILATDWLGRAEWQRRLLQRRYFGITNAGVAFYTRLDALDAARSGVREVYFLCL 121 A DE +L + W W RLLQ+RYFG ++AGV F+ R++ LD R+ V EV+ LCL Sbjct: 61 CAWIDEALLNSGWDDADRWTLRLLQKRYFGTSHAGVEFFERIETLDGERADVLEVFLLCL 120 Query: 122 SLGFAGRYGYDRNQKALTDIKRSNLELLLQDEDGLPAEAGRLLFPDGYGAALQPGEPERK 181 LGF GRYGYD + + L I+R +E L + G FP Y + Sbjct: 121 RLGFRGRYGYDGDSRPLEAIQRRAIEAL--SAEAASRADGEPPFPAAYTGI--ESQAMVA 176 Query: 182 PVRSRRRWKLSSFAFNAMLLPLLVLVVLYGIYHVIIWQVVNTILPQI 228 R+ RR + F LPL +L+ LY IYH++I ++V+++LP I Sbjct: 177 KARAHRRIGFAGLNFG---LPLAILLSLYLIYHIVIARMVDSVLPII 220 >ref|ZP_02466825.1| hypothetical protein Bpse38_25939 [Burkholderia thailandensis MSMB43] Length = 228 Score = 146 bits (368), Expect = 3e-33, Method: Composition-based stats. Identities = 96/230 (41%), Positives = 133/230 (57%), Gaps = 6/230 (2%) Query: 2 MRLLDCFISLLAQIRQFQRQPLGDPAALSAQLDAAIAQARRAGQDAGHADADIEEALFAV 61 M+L D + L+A RQ + P GD A ++ +LD I +AR AG +AD+++ALFAV Sbjct: 1 MKLSDSMMPLVAYARQLAQSPRGDAAEVALRLDILIERARDHAACAGAPEADVDDALFAV 60 Query: 62 LALADEIILATDWLGRAEWQRRLLQRRYFGITNAGVAFYTRLDALDAARSGVREVYFLCL 121 A DE +L + W W RLLQ+R+F ++AGV F+ RLDALD AR+ V VY LCL Sbjct: 61 CAWIDEALLNSGWDDADRWTLRLLQKRHFDTSHAGVVFFERLDALDGARANVLAVYLLCL 120 Query: 122 SLGFAGRYGYDRNQKALTDIKRSNLELLLQDEDGLPAEAGRLLFPDGY---GAALQPGEP 178 LGF GRYGYD + L I+R L+ L LPAE G FP Y G G P Sbjct: 121 QLGFRGRYGYDGGSQPLDAIRRRALD-ALSAHASLPAE-GEPPFPAAYPDDGYPDNAGHP 178 Query: 179 ERKPVRSRRRWKLSSFAFNAMLLPLLVLVVLYGIYHVIIWQVVNTILPQI 228 +R R +++ N LPL +L+ LY IYHV+I ++V+++ P++ Sbjct: 179 RAAAANARTRRRIALAGLNVG-LPLAILLSLYLIYHVVIVRMVDSVFPRL 227 >ref|ZP_02370342.1| hypothetical protein BthaT_04996 [Burkholderia thailandensis TXDOH] Length = 226 Score = 140 bits (354), Expect = 1e-31, Method: Composition-based stats. Identities = 94/229 (41%), Positives = 129/229 (56%), Gaps = 5/229 (2%) Query: 1 MMRLLDCFISLLAQIRQFQRQPLGDPAALSAQLDAAIAQARRAGQDAGHADADIEEALFA 60 MM+L D + L+A RQ + P GD A ++ +LD I +AR AG +AD+++ALFA Sbjct: 1 MMKLSDSMMPLVAYARQLAQSPRGDAAEVALRLDILIERARDHAACAGAPEADVDDALFA 60 Query: 61 VLALADEIILATDWLGRAEWQRRLLQRRYFGITNAGVAFYTRLDALDAARSGVREVYFLC 120 V A DE +L + W W RLLQ+RYF ++AGV F+ RLDALD AR+ V +VY LC Sbjct: 61 VCAWIDEALLNSGWSDAERWTLRLLQKRYFDTSHAGVVFFERLDALDGARADVLDVYLLC 120 Query: 121 LSLGFAGRYGYDRNQKALTDIKRSNLELLLQDEDGLPAEAGRLLFPDGY-GAALQPGEPE 179 L LGF GRYGYD L I++ L+ L P A L FP Y A QPG Sbjct: 121 LQLGFRGRYGYDGGSGPLDAIRQRALDAL--SAHAPPCAAHALPFPAAYPHAETQPGAHA 178 Query: 180 RKPVRSRRRWKLSSFAFNAMLLPLLVLVVLYGIYHVIIWQVVNTILPQI 228 R + + A LPL +L+ LY IYH +I ++V+++ P++ Sbjct: 179 IAAKARAR--RRIALAGRNFGLPLAILLSLYLIYHAVIVRMVDSVFPRL 225 >ref|YP_439053.1| hypothetical protein BTH_II0856 [Burkholderia thailandensis E264] ref|ZP_02384252.1| hypothetical protein BthaB_04956 [Burkholderia thailandensis Bt4] ref|ZP_05590423.1| hypothetical protein BthaA_23531 [Burkholderia thailandensis E264] gb|ABC34611.1| conserved hypothetical protein [Burkholderia thailandensis E264] Length = 226 Score = 140 bits (353), Expect = 1e-31, Method: Composition-based stats. Identities = 94/229 (41%), Positives = 129/229 (56%), Gaps = 5/229 (2%) Query: 1 MMRLLDCFISLLAQIRQFQRQPLGDPAALSAQLDAAIAQARRAGQDAGHADADIEEALFA 60 MM+L D + L+A RQ + P GD A ++ +LD I +AR AG +AD+++ALFA Sbjct: 1 MMKLSDSMMPLVAYARQLAQSPRGDAAEVALRLDILIERARDQAACAGAPEADVDDALFA 60 Query: 61 VLALADEIILATDWLGRAEWQRRLLQRRYFGITNAGVAFYTRLDALDAARSGVREVYFLC 120 V A DE +L + W W RLLQ+RYF ++AGV F+ RLDALD AR+ V +VY LC Sbjct: 61 VCAWIDEALLNSGWNDAERWTLRLLQKRYFDTSHAGVVFFERLDALDGARADVLDVYLLC 120 Query: 121 LSLGFAGRYGYDRNQKALTDIKRSNLELLLQDEDGLPAEAGRLLFPDGY-GAALQPGEPE 179 L LGF GRYGYD L I++ L+ L P A L FP Y A QPG Sbjct: 121 LQLGFRGRYGYDGGSGPLDAIRQRALDAL--SAHAPPCAAHALPFPAAYPHAETQPGAHA 178 Query: 180 RKPVRSRRRWKLSSFAFNAMLLPLLVLVVLYGIYHVIIWQVVNTILPQI 228 R + + A LPL +L+ LY IYH +I ++V+++ P++ Sbjct: 179 IAAKARAR--RRIALAGRNFGLPLAILLSLYLIYHAVIVRMVDSVFPRL 225