BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.4708.p         (103 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|ZP_02366156.1| lipoprotein, putative [Burkholderia oklahomen...    70   1e-10
ref|ZP_02359087.1| lipoprotein, putative [Burkholderia oklahomen...    69   3e-10
ref|ZP_04812644.1| conserved hypothetical protein [Burkholderia ...    65   3e-09
ref|ZP_03791583.1| conserved hypothetical protein [Burkholderia ...    65   3e-09
ref|ZP_03456773.1| conserved hypothetical protein [Burkholderia ...    65   3e-09

>ref|ZP_02366156.1| lipoprotein, putative [Burkholderia oklahomensis C6786]
          Length = 240

 Score = 70.1 bits (170), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 41/101 (40%), Positives = 57/101 (56%)

Query: 3   GAQVDVTGIRGELRFRELSASAEQAQARFGSLTSVAQNITSTVGRLVQKARDSFRWTENL 62
            A+VD++  R  +R   L A A+    R   +  VA+  TST+GR +      FR    +
Sbjct: 140 AARVDLSAHRACVRAAHLDARAQSIDGRAHDVRLVARRFTSTIGRALHTLGHCFRRVRGV 199

Query: 63  EETRAGRVRMLVKDRFHMKAAHTTLLADGQVKIDGEKIDLG 103
           ++TRA RVR  + +R H+ A   TLLAD  V IDGE+IDLG
Sbjct: 200 DDTRASRVRWQIDERAHLHARDVTLLADRHVGIDGERIDLG 240


>ref|ZP_02359087.1| lipoprotein, putative [Burkholderia oklahomensis EO147]
          Length = 239

 Score = 68.6 bits (166), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 41/101 (40%), Positives = 57/101 (56%)

Query: 3   GAQVDVTGIRGELRFRELSASAEQAQARFGSLTSVAQNITSTVGRLVQKARDSFRWTENL 62
            A+VD++  R  +R   L A A+    R   +  VA+  TST+GR +      FR    +
Sbjct: 139 AARVDLSAHRACVRAAHLDARAQSIDGRAHDVRLVARRFTSTIGRALHTLGHCFRRVRGV 198

Query: 63  EETRAGRVRMLVKDRFHMKAAHTTLLADGQVKIDGEKIDLG 103
           ++TRA RVR  + +R H+ A   TLLAD  V IDGE+IDLG
Sbjct: 199 DDTRASRVRWQIDERAHLHARDVTLLADRHVGIDGERIDLG 239


>ref|ZP_04812644.1| conserved hypothetical protein [Burkholderia pseudomallei 1106b]
 gb|EES23269.1| conserved hypothetical protein [Burkholderia pseudomallei 1106b]
          Length = 251

 Score = 65.1 bits (157), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 40/99 (40%), Positives = 52/99 (52%)

Query: 5   QVDVTGIRGELRFRELSASAEQAQARFGSLTSVAQNITSTVGRLVQKARDSFRWTENLEE 64
           +VDV+  R  +R   L A A     R   +  VA+  TST+GR +    D  R    ++E
Sbjct: 153 RVDVSAHRAHVRAAHLDACARSIDGRAHDVRLVARRFTSTIGRALHTLGDCLRRVCGVDE 212

Query: 65  TRAGRVRMLVKDRFHMKAAHTTLLADGQVKIDGEKIDLG 103
             A R R  V +R H+ A   TLLAD  V IDGE+IDLG
Sbjct: 213 LHAARARWRVDERAHLHARDVTLLADRHVGIDGERIDLG 251


>ref|ZP_03791583.1| conserved hypothetical protein [Burkholderia pseudomallei Pakistan
           9]
 gb|EEH27891.1| conserved hypothetical protein [Burkholderia pseudomallei Pakistan
           9]
          Length = 257

 Score = 65.1 bits (157), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 40/99 (40%), Positives = 52/99 (52%)

Query: 5   QVDVTGIRGELRFRELSASAEQAQARFGSLTSVAQNITSTVGRLVQKARDSFRWTENLEE 64
           +VDV+  R  +R   L A A     R   +  VA+  TST+GR +    D  R    ++E
Sbjct: 159 RVDVSAHRAHVRAAHLDACARSIDGRAHDVRLVARRFTSTIGRALHTLGDCLRRVCGVDE 218

Query: 65  TRAGRVRMLVKDRFHMKAAHTTLLADGQVKIDGEKIDLG 103
             A R R  V +R H+ A   TLLAD  V IDGE+IDLG
Sbjct: 219 LHAARARWRVDERAHLHARDVTLLADRHVGIDGERIDLG 257


>ref|ZP_03456773.1| conserved hypothetical protein [Burkholderia pseudomallei 576]
 gb|EEC31910.1| conserved hypothetical protein [Burkholderia pseudomallei 576]
          Length = 251

 Score = 65.1 bits (157), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 40/99 (40%), Positives = 52/99 (52%)

Query: 5   QVDVTGIRGELRFRELSASAEQAQARFGSLTSVAQNITSTVGRLVQKARDSFRWTENLEE 64
           +VDV+  R  +R   L A A     R   +  VA+  TST+GR +    D  R    ++E
Sbjct: 153 RVDVSAHRAHVRAAHLDACARSIDGRAHDVRLVARRFTSTIGRALHTLGDCLRRVCGVDE 212

Query: 65  TRAGRVRMLVKDRFHMKAAHTTLLADGQVKIDGEKIDLG 103
             A R R  V +R H+ A   TLLAD  V IDGE+IDLG
Sbjct: 213 LHAARTRWRVDERAHLHARDVTLLADRHVGIDGERIDLG 251