BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.4700.p (436 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777132.1| hypothetical protein Hsero_3746 [Herbaspiril... 617 e-174 gb|EGP45845.1| hypothetical protein AXXA_13929 [Achromobacter xy... 322 9e-86 ref|YP_003976750.1| hypothetical protein AXYL_00677 [Achromobact... 314 2e-83 ref|YP_351402.1| hypothetical protein Pfl01_5675 [Pseudomonas fl... 248 1e-63 ref|YP_263262.1| hypothetical protein PFL_6204 [Pseudomonas fluo... 248 1e-63 >ref|YP_003777132.1| hypothetical protein Hsero_3746 [Herbaspirillum seropedicae SmR1] gb|ADJ65224.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1] Length = 446 Score = 617 bits (1591), Expect = e-174, Method: Composition-based stats. Identities = 336/424 (79%), Positives = 374/424 (88%) Query: 13 MPLAFLPARFARRSCLCLIWMLLAVLLAACSRHPLPAEKLSQDVYIWQRQWTPSLRTALS 72 MP AFLP R RR C L WMLLA+LLAACSR P P +L QD YIWQRQWTP+LRTALS Sbjct: 23 MPFAFLPERSCRRICRGLSWMLLALLLAACSRAPAPGARLPQDAYIWQRQWTPALRTALS 82 Query: 73 ASNAQVARWHVLAAELGASGRWIDIEPEAAVLADTGRPLLLTVRLNGQLARFDGAAIQAH 132 AS+A VARWHVLAAELGASGRWIDI+P+ LA+TGRPLL+TVR+NGQLAR D AAIQ H Sbjct: 83 ASHAHVARWHVLAAELGASGRWIDIDPDVEALANTGRPLLMTVRINGQLARLDAAAIQDH 142 Query: 133 LLELLTAWRARGLQPAALEIDYDCATARLPEYTAFLRSLKARIAPTDLTVTALPTWLASP 192 LLE L+AWR RGLQPAALEIDYDCATARLPEY AFLRSLKAR+AP DL VTALPTWL+SP Sbjct: 143 LLERLSAWRRRGLQPAALEIDYDCATARLPEYIAFLRSLKARVAPLDLAVTALPTWLSSP 202 Query: 193 QLSALLAVADESTLQVHAVLDPRLGLFDAQRAQDWMQQYAVRTRHPWHVALPAYGSRVSW 252 QL++LLAVADESTLQVHAVLDPRLGLFDA+ AQDW+ QYA RTR PWHVALPAYG+RVSW Sbjct: 203 QLASLLAVADESTLQVHAVLDPRLGLFDARLAQDWLHQYAQRTRRPWHVALPAYGARVSW 262 Query: 253 DSQGRIAAVESERPLLTGGLGRELMAEPQVMARFVAEVEAAPPPGLAGLIWFRLPTGDDR 312 D+QGRIAAVESERPLL GGLG ELM +PQVMARFVA+++A+PP G+AG+ WFRLPTGDDR Sbjct: 263 DAQGRIAAVESERPLLAGGLGNELMVDPQVMARFVAQLQASPPAGMAGITWFRLPTGDDR 322 Query: 313 RAWSLSTWLAVLERKPLKGGLAVQLVAGQGNDAPADIRIDNAGNADAPLPLRVRVNLAPR 372 RAWSLSTW+AVLE KPLK GL VQLVAGQG + P+DIR++N GNAD LPLRVR+ + Sbjct: 323 RAWSLSTWIAVLEGKPLKPGLQVQLVAGQGGNTPSDIRLNNEGNADVSLPLRVRIKVRAG 382 Query: 373 DAASPGNVCSGDGINGYTLESDARGRYLRLGQAGLLRAGSSRSIGWLRCAAGVAAPELTL 432 DAAS GNVCSGDGINGYTLE+DA+GRYLRLGQAGLLRAG+SR+IGWLRCA G AAP++TL Sbjct: 383 DAASAGNVCSGDGINGYTLENDAQGRYLRLGQAGLLRAGASRTIGWLRCAEGGAAPDITL 442 Query: 433 EMGS 436 EMGS Sbjct: 443 EMGS 446 >gb|EGP45845.1| hypothetical protein AXXA_13929 [Achromobacter xylosoxidans AXX-A] Length = 397 Score = 322 bits (825), Expect = 9e-86, Method: Composition-based stats. Identities = 206/387 (53%), Positives = 249/387 (64%), Gaps = 15/387 (3%) Query: 37 VLLAACSRHPLPAEKLSQDVYIWQRQWTPSLRTALSASNAQVARWHVLAAELGASGRWID 96 +LLAAC R P L D Y+WQRQWTP+L +AL+ V W VLAAEL A G W D Sbjct: 13 LLLAACERASPP---LPNDAYVWQRQWTPALVSALAEGADAVRSWRVLAAELRADGAWFD 69 Query: 97 IEPEAAVLADTGRPLLLTVRLNGQLARFDGAAIQAHLLELLTAWRARGLQPAALEIDYDC 156 P+ A LA + RP++L +RL+G++ I L AWR G+ A LEIDYDC Sbjct: 70 AAPDLAALAASQRPVVLVLRLDGRVNDLRDTDIADRAAATLAAWRQAGVTLAGLEIDYDC 129 Query: 157 ATARLPEYTAFLRSLKARI-APTDLTVTALPTWLASPQLSALLAVADESTLQVHAVLDPR 215 AT++LP Y A L +LK R+ A L++TALPTWL SP L ALLAV DE+ LQVHAV +P Sbjct: 130 ATSKLPAYAALLATLKTRLGASLPLSITALPTWLDSPALPALLAVPDETVLQVHAVQNPT 189 Query: 216 LGLFDAQRAQDWMQQYAVRTRHPWHVALPAYGSRVSWDSQGRIAAVESERP-LLTGGLGR 274 GLFDA+RA+ W+ YA PW VALP+YGSRV+WD GRIAAVESERP L+ GG Sbjct: 190 QGLFDAKRARAWLDAYARHAAKPWRVALPSYGSRVAWDEHGRIAAVESERPALMPGGRSA 249 Query: 275 ELMAEPQVMARFVAEVEAAPPPGLAGLIWFRLPTGDDRRAWSLSTWLAVLERKPLKGGLA 334 EL+ P MA FVA ++ PPGL+G++WFRLPT D RAWSL TW AVL R+PL LA Sbjct: 250 ELLVTPDAMAAFVAALDRDRPPGLSGIVWFRLPTQADTRAWSLPTWRAVLARQPLTPRLA 309 Query: 335 VQLVAGQGNDAPADIRIDNAGNADAPLPLRVRVNLAPRDAASPGNVCSGDGINGYTLESD 394 V A G D+R+ N GNAD LP VR++ + DGINGYTLE D Sbjct: 310 VTAAA-PGAGGARDVRLANRGNADTALPFTVRLD---------ATCSAADGINGYTLEYD 359 Query: 395 ARGRYLRLGQAGLLRAGSSRSIGWLRC 421 GRYLR Q GLLRAG+ R+IGW+RC Sbjct: 360 REGRYLRRAQDGLLRAGAERAIGWIRC 386 >ref|YP_003976750.1| hypothetical protein AXYL_00677 [Achromobacter xylosoxidans A8] gb|ADP14035.1| hypothetical protein AXYL_00677 [Achromobacter xylosoxidans A8] Length = 428 Score = 314 bits (804), Expect = 2e-83, Method: Composition-based stats. Identities = 200/426 (46%), Positives = 255/426 (59%), Gaps = 21/426 (4%) Query: 6 NSTSPTTMPLAFLPARFAR-----RSCLCLIWMLLAVLLAACSRHPLPAEKLSQDVYIWQ 60 +S P++ P P +R + C I+ +L +LLAAC + L D Y+WQ Sbjct: 9 HSIRPSSPPRHAFPILASRMNALAKRCSAAIFSVLLLLLAACGKQA----DLPGDAYVWQ 64 Query: 61 RQWTPSLRTALSASNAQVARWHVLAAELGASGRWIDIEPEAAVLADTGRPLLLTVRLNGQ 120 R WTP + AL+ S V W VL E+ GRW P+ A LA RP+++ +RL+G+ Sbjct: 65 RVWTPPVSQALADSADIVRAWRVLMGEMNPDGRWFTAAPDLAALAAAKRPVIMVLRLDGR 124 Query: 121 LARFDGAAIQAHLLELLTAWRARGLQPAALEIDYDCATARLPEYTAFLRSLKARIAPT-D 179 A + A + +AWR G+ A +EIDYDC T++LP Y AFL +LK + P Sbjct: 125 ADALPSAEVLARIAAARSAWRDAGVALAGIEIDYDCPTSKLPAYAAFLAALKPGLGPDLP 184 Query: 180 LTVTALPTWLASPQLSALLAVADESTLQVHAVLDPRLGLFDAQRAQDWMQQYAVRTRHPW 239 L++TALPTWL L LL + DE+ LQVHAVL P GLF+A+RA W+ +A RT+ PW Sbjct: 185 LSITALPTWLNGSGLDELLRIPDEAVLQVHAVLSPEQGLFNAKRASAWLTAFADRTQRPW 244 Query: 240 HVALPAYGSRVSWDSQGRIAAVESER-PLLTGGLGRELMAEPQVMARFVAEVEAAPPPGL 298 VAL YGSRVSW+ G IAAVESER LL GG EL+A P MA FV E+ + PPGL Sbjct: 245 RVALATYGSRVSWNDDGSIAAVESERSALLPGGRASELVATPASMAAFVDEIHRSRPPGL 304 Query: 299 AGLIWFRLPTGDDRRAWSLSTWLAVLERKPLKGGLAVQLVAGQGNDAPADIRIDNAGNAD 358 AG++WFRLPT D RAWS +TW AVL R+PL L+V A GN A D+ + N GNAD Sbjct: 305 AGIVWFRLPTARDERAWSPTTWRAVLTRQPLLPTLSVTARATGGNGA-QDLILSNGGNAD 363 Query: 359 APLPLRVRVNLAPRDAASPGNVCSGDGINGYTLESDARGRYLRLGQAGLLRAGSSRSIGW 418 A LP +R + A R A DGINGYTLE D+ G +LR Q GLL AG R+IGW Sbjct: 364 AALPFAIRWDGACRAA---------DGINGYTLEHDSGGAFLRRSQDGLLHAGGQRNIGW 414 Query: 419 LRCAAG 424 +RC G Sbjct: 415 IRCENG 420 >ref|YP_351402.1| hypothetical protein Pfl01_5675 [Pseudomonas fluorescens Pf0-1] gb|ABA77411.1| conserved hypothetical protein [Pseudomonas fluorescens Pf0-1] Length = 397 Score = 248 bits (634), Expect = 1e-63, Method: Composition-based stats. Identities = 161/392 (41%), Positives = 215/392 (54%), Gaps = 13/392 (3%) Query: 32 WMLLAVLLAACSRHPLPAEKLSQDVYIWQRQWTPSLRTALSASNAQVARWHVLAAELGAS 91 W L +L C+ A L Q +Y+WQRQWTP+ AL+ S + + VLA + + Sbjct: 7 WAALVAMLLLCACERQDAVPLDQQLYVWQRQWTPAHELALNDSRSDFSTLRVLALQAFPN 66 Query: 92 GRWIDIEPEAAVLADTGRPLLLTVRLNGQLARFDGAAIQAHLLELLTAWRARGLQPAALE 151 W + A+L RPL+ +RL+GQL D A+ A +L++L W+ +GL A +E Sbjct: 67 AGWSRARIDTALLKHDARPLIAVIRLDGQLKALDPQAVTAQILQVLADWQGQGLTLAGVE 126 Query: 152 IDYDCATARLPEYTAFLRSLKARI-APTDLTVTALPTWLASPQLSALLAVADESTLQVHA 210 ID+D +ARL YT FL L+ + A L++TALP WL SPQL ALLA D S LQVHA Sbjct: 127 IDHDAGSARLSAYTEFLTHLRGALPANLPLSITALPAWLDSPQLPALLATVDSSVLQVHA 186 Query: 211 VLDPRLGLFDAQRAQDWMQQYAVRTRHPWHVALPAYGSRVSWDSQGRIAAVESERPLLTG 270 V DPR GLFD ++A+ W + + T P+++ALPAYG + ++ G VESE PL G Sbjct: 187 VSDPRRGLFDPEQARRWAKAWGRVTDKPFYLALPAYGVALLPEADG-APVVESEVPLERG 245 Query: 271 GLGRELMAEPQVMARFVAEVEAAPPPGLAGLIWFRLPTGDDRRAWSLSTWLAVLERKPLK 330 G REL+A+PQ + R E+ P LAGLIWFRLP +DRRAWSLST AV L Sbjct: 246 GQRRELLADPQQLGRLAIELREDRPAHLAGLIWFRLPLANDRRAWSLSTLRAVARGDALS 305 Query: 331 GGLAVQLVAGQGNDAPADIRIDNAGNADAPLPLRVRVNLAPRDAASPGNVCSGDGINGYT 390 L + G DI + N GN D+ P R+ + + A D + GY Sbjct: 306 SQLGLTFTNQNG---LQDIALRNVGNLDSAWPARITIQARGCEGA--------DALAGYA 354 Query: 391 LESDARGRYLRLGQAGLLRAGSSRSIGWLRCA 422 L+ A + G L AG R+IGW RCA Sbjct: 355 LQQTADLLTFTRLRDGRLPAGGQRAIGWARCA 386 >ref|YP_263262.1| hypothetical protein PFL_6204 [Pseudomonas fluorescens Pf-5] gb|AAY95392.1| conserved hypothetical protein [Pseudomonas fluorescens Pf-5] Length = 437 Score = 248 bits (634), Expect = 1e-63, Method: Composition-based stats. Identities = 167/406 (41%), Positives = 220/406 (54%), Gaps = 18/406 (4%) Query: 17 FLPARFARRSCLCLIWMLLAVLLAACSRHPLPAEKLSQDVYIWQRQWTPSLRTALSASNA 76 F+ R R C L+ +LL AC P L Q +YIWQRQWTP+ AL+ S A Sbjct: 37 FMLPRVLLRLCAVLV---CGLLLNACRHEEGPP--LDQQLYIWQRQWTPAHADALAGSRA 91 Query: 77 QVARWHVLAAELGASGRWIDIEPEAAVLADTGRPLLLTVRLNGQLARFDGAAIQAHLLEL 136 + VLA + W +AA+L GRPL+ VRL+GQL + I + +L Sbjct: 92 DFSTVRVLALQAFPQAGWSRARIDAALLKQDGRPLIAVVRLDGQLPSLNQDDILQQVQQL 151 Query: 137 LTAWRARGLQPAALEIDYDCATARLPEYTAFLRSLKARIAPT-DLTVTALPTWLASPQLS 195 L W+ +GL A LEID+D +ARLP Y LR L+ + L++TALP WL S +L Sbjct: 152 LADWQGQGLTLAGLEIDHDAGSARLPAYAGLLRRLREVLPQQLALSITALPAWLDSRELP 211 Query: 196 ALLAVADESTLQVHAVLDPRLGLFDAQRAQDWMQQYAVRTRHPWHVALPAYGSRVSWDSQ 255 LLA D S LQVHAV DPR GLFD +A+ W +++A + P+++ALPAYG + Sbjct: 212 GLLAQVDSSVLQVHAVSDPRRGLFDPHQAEQWARRWAGVSDKPFYLALPAYGVAL-LPGT 270 Query: 256 GRIAAVESERPLLTGGLGRELMAEPQVMARFVAEVEAAPPPGLAGLIWFRLPTGDDRRAW 315 + VESE P+ G RELMA+P+ +++ + PP LAGLIWFRLP D RAW Sbjct: 271 AQAPVVESEAPIARRGQRRELMADPEQLSQLAKTLRNDPPAHLAGLIWFRLPLKGDVRAW 330 Query: 316 SLSTWLAVLERKPLKGGLAVQLVAGQGNDAPADIRIDNAGNADAPLPLRVRVNLAPRDAA 375 SL T AV L L + L Q D DIR+DN GN D PLP ++ + +A D Sbjct: 331 SLDTLRAVARGDVLDSRLGISL---QEQDGLFDIRLDNPGNLDRPLPEQLTLAVAQCDGF 387 Query: 376 SPGNVCSGDGINGYTLESDARGRYLRLGQAGLLRAGSSRSIGWLRC 421 DG+ GY+ E L QAG L AG +R++GW RC Sbjct: 388 --------DGLGGYSAELRDGQLLLTRQQAGRLAAGGTRAVGWARC 425