BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.4699.p (861 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777131.1| hypothetical protein Hsero_3745 [Herbaspiril... 1143 0.0 gb|EFV83132.1| hypothetical protein HMPREF0005_02278 [Achromobac... 584 e-164 gb|EGP45844.1| tetratricopeptide repeat family protein 3 [Achrom... 577 e-162 ref|YP_003976749.1| tetratricopeptide repeat family protein 3 [A... 556 e-156 gb|ADV53472.1| TPR repeat-containing protein [Shewanella putrefa... 270 7e-70 >ref|YP_003777131.1| hypothetical protein Hsero_3745 [Herbaspirillum seropedicae SmR1] gb|ADJ65223.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1] Length = 826 Score = 1143 bits (2956), Expect = 0.0, Method: Composition-based stats. Identities = 675/818 (82%), Positives = 733/818 (89%), Gaps = 1/818 (0%) Query: 42 LGRMTKIACAASSLLVLGAATVVACGPDFPLQLLDDRAGTLSNTPANSFAWEAAHLVTPA 101 +GRM K+A AAS LLVLGAATVVACGPDFP+QLLDDR G L NTPANSFAWEAAHLVTPA Sbjct: 9 MGRMKKLAYAASGLLVLGAATVVACGPDFPMQLLDDRVGALRNTPANSFAWEAAHLVTPA 68 Query: 102 DKLQADERSGYEQAAGQPDDPRSLRMIEKGQLEGAQWAALQAMRAAPDGESAYAAGAALP 161 DKLQADE SGYEQA GQPDDPRSLRMIEKG+L+ AQW ALQAMRAA DGESAYAAGAALP Sbjct: 69 DKLQADEGSGYEQAVGQPDDPRSLRMIEKGRLDAAQWTALQAMRAAADGESAYAAGAALP 128 Query: 162 PAIRLYTAGAQDFRANALAAARQRFEAVLALPPQQASERAVWAAFMLGRLHAIEERRAEA 221 PAIRLYTA AQDFRANALAAARQRFEAVLALPPQQASERAVWAA+MLGRLHAIE RR +A Sbjct: 129 PAIRLYTAAAQDFRANALAAARQRFEAVLALPPQQASERAVWAAYMLGRLHAIEGRREQA 188 Query: 222 IASFTKARALAVSGAPDPLGLAVASYGEQARLMLSGQSGPCNWSDFNEGRDCGETIPPAD 281 IASFTKARALAV+GA DP+GLAVASYGEQARLML G++G CNWSDFNEGRDC ++I PAD Sbjct: 189 IASFTKARALAVAGAADPMGLAVASYGEQARLMLVGEAGSCNWSDFNEGRDCAQSIAPAD 248 Query: 282 FKQAIRLYAEQAARGSYNAQDSLTALAAWSLGHADISAALIDDPVAQRLLVAYALARVGD 341 FKQAI LYAEQAARGS +AQ SL ALAAW+LG+A+ SAALIDD VAQRLLVAYALAR+GD Sbjct: 249 FKQAIHLYAEQAARGSASAQSSLEALAAWNLGNAERSAALIDDAVAQRLLVAYALARLGD 308 Query: 342 IAEGSGNGDSYYDPSAPNSGSSGYPDAARSAKVKPNSVLVTLVDALKRRGLEKIEGADRV 401 + EG G YDP+AP SGSSGY DAARS +KP+ +LV L+DALKRRGLEKI+GADRV Sbjct: 309 VGEGPQAGGYDYDPTAPTSGSSGYADAARSDTLKPSPILVNLIDALKRRGLEKIDGADRV 368 Query: 402 AALAYRTGRYDLAATLANRQETALSWWVRAKLALRKGDTAAAVQAYARAAQGFPRNDASL 461 AALAYRTGRY+LAA+LA RQ+TAL+WWVRAKLALR+GD AAVQAY RA Q FPRNDASL Sbjct: 369 AALAYRTGRYELAASLAGRQDTALAWWVRAKLALRRGDNEAAVQAYTRAVQAFPRNDASL 428 Query: 462 DPSNANLLMGEQGVLTLSRGQYVEALAQFHRAATQSARQNRGYYSASYGDYYNDLAYVAE 521 +P NANLLMGEQGVLTLSRGQYVEALAQFHRAA+++ARQ+ Y YG YYNDLAYVAE Sbjct: 429 EPGNANLLMGEQGVLTLSRGQYVEALAQFHRAASETARQSGNGYFGMYG-YYNDLAYVAE 487 Query: 522 RVLSTDELKTYVDAHAPASPMPSAQAVQAKAAQQQGRPSLRWVALELAPLTVEDNLRQLL 581 RVL+ DELKTYVDAHAPASPMP+ +AV QQQGR S RW A+ L+ +TVEDNLRQLL Sbjct: 488 RVLTVDELKTYVDAHAPASPMPAPEAVAKAVQQQQGRQSRRWAAVGLSAITVEDNLRQLL 547 Query: 582 ARRLVREGRVEEALPYFPDERDERFVQSSYDDQGRETPVTWRVRAKAREYGQALERAHHA 641 ARRLVREGRVE+AL YFPDERDERFVQSSYD +GRETP WR+RAKAR+YG+ALER HA Sbjct: 548 ARRLVREGRVEDALAYFPDERDERFVQSSYDAEGRETPDAWRLRAKARDYGRALERGQHA 607 Query: 642 WRATSRAQGWYEAAVIARRQGMEIMGYEQGPDYAVYGGSYPGGAGRGIGMYGNEDKPLPD 701 WRA SRAQGWYEAA+IARRQGMEIMGYEQGPD+AVYGGSYPGGAGRG GMY +E +P+PD Sbjct: 608 WRANSRAQGWYEAALIARRQGMEIMGYEQGPDFAVYGGSYPGGAGRGTGMYADESRPVPD 667 Query: 702 NPQARAQADLPGPLVTDEERRRYAASEAKPYKRFHYRDIAADYIMKSADALPARSQAFAA 761 NPQARAQADLPGPLVTD ER+RYAASEAKPYKRFHYRD+AADY+MK+ADALP RSQAFAA Sbjct: 668 NPQARAQADLPGPLVTDGERQRYAASEAKPYKRFHYRDVAADYVMKAADALPPRSQAFAA 727 Query: 762 VLCQGVNFVYYDQPRAEQLYLRYVKEGAAVPFSADFGQNCVEPDFAAAARFPYVQAWRST 821 VLCQGVNFVYYDQPRAEQLY RYVKEGAAVPFSADFGQNCVEPDFAAAARFPYVQAWR Sbjct: 728 VLCQGVNFVYYDQPRAEQLYRRYVKEGAAVPFSADFGQNCVEPDFAAAARFPYVQAWRGA 787 Query: 822 RRWVSQHRALSAALLLGAAVGAGFGVAQWRRRRRAAKT 859 R WV++HRA+SAALLL A VG GFGVAQWRRRRR KT Sbjct: 788 RGWVARHRAVSAALLLAAMVGGGFGVAQWRRRRRVNKT 825 >gb|EFV83132.1| hypothetical protein HMPREF0005_02278 [Achromobacter xylosoxidans C54] Length = 811 Score = 584 bits (1506), Expect = e-164, Method: Composition-based stats. Identities = 418/781 (53%), Positives = 501/781 (64%), Gaps = 30/781 (3%) Query: 63 VVACGPDFPLQLLDDRAGTLSNTPANSFAWEAAHLVTPADKLQADERSGYEQAAGQPDDP 122 V+ACGPDFP QLLDDRAGTL TPANSFA+EA LV D L+A+E + + D Sbjct: 19 VIACGPDFPPQLLDDRAGTLQGTPANSFAYEAMRLVPATDSLRANESPLLPDGSYRSD-- 76 Query: 123 RSLRMIEKGQLEGAQWAALQAMRAAPDGESAYAAGAALPPAIRLYTAGAQDFRANALAA- 181 ++ L AQ L+ MR PDGE AYAAGA LP A+RLY A A D+ A Sbjct: 77 -AIPEAYDPALTPAQLDQLRLMRTRPDGEQAYAAGAGLPEAVRLYAAAAVDYHTAPQAPH 135 Query: 182 ------ARQRFEAVLALPPQQASERAVWAAFMLGRLHAIEERRAEAIASFTKARALAVSG 235 ARQR A+LALP +QA+ R+VWAA+ML A A + + R +A+ G Sbjct: 136 EQRWERARQRLRAILALPAEQAATRSVWAAYML----AETGNPGTAAQDYARVREMALQG 191 Query: 236 APDPLGLAVASYGEQARLMLSGQSGPCNWSDFNEGRDCGETIPPADFKQAIRLYAEQAAR 295 APDPLGLAVASYG+QARL L+G G C + D C + I PA+ QA+RLYA QAAR Sbjct: 192 APDPLGLAVASYGQQARLSLTGNLGQCAYEDVVNATPCLDAIAPANLHQAVRLYAAQAAR 251 Query: 296 GSYNAQDSLTALAAWSLGHADISAALIDDPVAQRLLVAYALARVGDIAEGSGNGDSYYDP 355 S + ++SL +A W+L A + LIDDPV QRLLVAY LAR+GDI +G DS DP Sbjct: 252 DSISGRESLRLIADWALASAARAGRLIDDPVGQRLLVAYGLARIGDIVDG--KPDSARDP 309 Query: 356 SA--PNSGSSGYPDAARSA-KVKPNSVLVTLVDALKRRGLEKIEGADRVAALAYRTGRYD 412 A +G DAA A V PN L +LV AL+ + ++I ADRVAALAYR GRYD Sbjct: 310 FANFEQTGRLSLADAAGGAPNVAPNPALQSLVAALQTQDPQRIADADRVAALAYRVGRYD 369 Query: 413 LAATLANRQETALSWWVRAKLALRKGDTAAAVQAYARAAQGFPRNDASLDPSNANLLMGE 472 LA TLA R +TAL+WWVRAKLA+R+GD A QAYARA FPR D SL+P +A+LL E Sbjct: 370 LAQTLAERLDTALAWWVRAKLAIRRGDNELAAQAYARAIAAFPRADGSLEPGSASLLKAE 429 Query: 473 QGVLTLSRGQYVEALAQFHRAATQSARQNRGYYSASYGDYYNDLAYVAERVLSTDELKTY 532 QGVL+LSRGQYVEAL Q +RAA N Y+ND AYVAERVL+T+ELK Y Sbjct: 430 QGVLSLSRGQYVEALDQLYRAAATRDGANPDDEGWPLSPYWNDAAYVAERVLTTEELKAY 489 Query: 533 VDAHAPASPMPSAQAVQAKAAQQQGRPSLRWVALELAPLTVEDNLRQLLARRLVREGRVE 592 VD P +P P+ A ++ +Q R L P D LRQLLARRLVREGRV Sbjct: 490 VDRLPPPAPAPARPAGFSRYTPEQFYQWSR-----LNPPPAHDRLRQLLARRLVREGRVA 544 Query: 593 EALPYFPDERDERFVQSSYDDQGRETPVTWRVRAKAREYGQALERAHHAWRATSRAQGWY 652 EALPYFP + D RF YDD + + VR +A YG AL A AW T+RAQ WY Sbjct: 545 EALPYFPADSDPRFASGGYDDGAWKIQES-DVRQRAARYGDALRTAGSAWGRTARAQAWY 603 Query: 653 EAAVIARRQGMEIMGYEQGPDYAVYGGSYPGGAGRGIGMYGNE---DKPLP-DNPQARAQ 708 +AA +ARR G+ IMGYEQGPDYAVY G+Y GAGR + E D +P D P RA+ Sbjct: 604 QAATLARRDGIRIMGYEQGPDYAVYDGNYSAGAGRDANPWWREARADAGMPLDTPLQRAE 663 Query: 709 ADLPGPLVTDEERRRYAASEAKPYKRFHYRDIAADYIMKSADALPARSQAFAAVLCQGVN 768 ADLPGP VT EER+RYAASEA+P R+HYR IAADY MK+AD LP+RSQAFAAVLC+G Sbjct: 664 ADLPGPYVTQEERKRYAASEARPNVRYHYRQIAADYAMKAADELPSRSQAFAAVLCRGAR 723 Query: 769 FVYYDQP-RAEQLYLRYVKEGAAVPFSADFGQNCVEPDFAAAARFPYVQAWRSTRRWVSQ 827 +V D P RA +YLRYV +GA VPFS FG+ C EPDF +AARF Y+QAW++ R Q Sbjct: 724 YVIDDTPERASAIYLRYVDQGARVPFSDTFGRECPEPDFQSAARFHYIQAWKAWERARQQ 783 Query: 828 H 828 H Sbjct: 784 H 784 >gb|EGP45844.1| tetratricopeptide repeat family protein 3 [Achromobacter xylosoxidans AXX-A] Length = 827 Score = 577 bits (1486), Expect = e-162, Method: Composition-based stats. Identities = 413/783 (52%), Positives = 500/783 (63%), Gaps = 28/783 (3%) Query: 63 VVACGPDFPLQLLDDRAGTLSNTPANSFAWEAAHLVTPADKLQADERSGYEQAAGQPDDP 122 V+ACGPDFP QLLDDRAGTL TPANSFA+EAA L+ D L+A+E + + D Sbjct: 22 VIACGPDFPPQLLDDRAGTLQGTPANSFAYEAARLMPATDTLRANESPLLPDGSYRSD-- 79 Query: 123 RSLRMIEKGQLEGAQWAALQAMRAAPDGESAYAAGAALPPAIRLYTAGAQDFRANA---- 178 ++ L AQ + MRA PDG+ AYAAGA LP A RLY A A D+R+ A Sbjct: 80 -AIPEAFDTALTPAQREQARTMRARPDGDQAYAAGAGLPEAARLYAAAAVDYRSAAQAPD 138 Query: 179 ---LAAARQRFEAVLALPPQQASERAVWAAFMLGRLHAIEERRAEA--IASFTKARALAV 233 L ARQR A+LALP +QA+ R+VWAA++L + I A ++ + R LA+ Sbjct: 139 EPRLERARQRLLAILALPAEQAATRSVWAAYLLAEIGDIGATPAPGSPAQAYARVRELAL 198 Query: 234 SGAPDPLGLAVASYGEQARLMLSGQSGPCNWSDFNEGRDCGETIPPADFKQAIRLYAEQA 293 GAPDPLGLAVASYG++ARL LSG G C + D C + I PAD ++A+RLYA QA Sbjct: 199 QGAPDPLGLAVASYGQEARLSLSGSLGQCAYEDLFNATPCMDAIAPADLQRAVRLYAAQA 258 Query: 294 ARGSYNAQDSLTALAAWSLGHADISAALIDDPVAQRLLVAYALARVGDIAEGSGNGDSYY 353 AR S + ++SL +A W+L + LIDDPV+QRLLVAY LAR+GDI +G DS Sbjct: 259 ARDSISGRESLRLMADWALASPTRAIRLIDDPVSQRLLVAYGLARLGDIVDG--KPDSAR 316 Query: 354 DPSA--PNSGSSGYPDAAR-SAKVKPNSVLVTLVDALKRRGLEKIEGADRVAALAYRTGR 410 DP A +G DAA + + PN L +LV AL+ + +I ADRVAALAYR GR Sbjct: 317 DPFANFEATGRLSLADAADGTPNITPNPALQSLVAALQTQDPRRIVDADRVAALAYRVGR 376 Query: 411 YDLAATLANRQETALSWWVRAKLALRKGDTAAAVQAYARAAQGFPRNDASLDPSNANLLM 470 YDLA LA+R +TAL+WWVRAKLA+R+GD A QAYARA FPR D S++ LL Sbjct: 377 YDLAQGLADRLDTALAWWVRAKLAIRRGDNELAAQAYARAVDAFPRGDGSVEAQAGALLK 436 Query: 471 GEQGVLTLSRGQYVEALAQFHRAATQSARQNRGYYSASYGDYYNDLAYVAERVLSTDELK 530 GEQGVL+LSRGQYVEAL Q +RAA Y+ND AYVAERVL+T+ELK Sbjct: 437 GEQGVLSLSRGQYVEALDQLYRAAVAGDGAPPPEEGWPLSPYWNDAAYVAERVLTTEELK 496 Query: 531 TYVDAHAPASPMPSAQAVQAKAAQQQGRPSLRWVALELAPLTVEDNLRQLLARRLVREGR 590 YVD P P PS ++ Q W L P V D LRQLLARRLVRE R Sbjct: 497 AYVDRLPPPPPAPSRPPGFSRYTTDQ---FYEWSRLNQPP--VHDRLRQLLARRLVRENR 551 Query: 591 VEEALPYFPDERDERFVQSSYDDQGRETPVTWRVRAKAREYGQALERAHHAWRATSRAQG 650 V EALPYFP + D RF YDD G T +R +A +YG AL+ A +AW T+RA+ Sbjct: 552 VAEALPYFPADSDPRFATLDYDD-GNWTIRESDLRQRAAQYGDALQAAGNAWGRTTRAEA 610 Query: 651 WYEAAVIARRQGMEIMGYEQGPDYAVYGGSYPGGAGRGIGMYGNE---DKPLP-DNPQAR 706 WY AA +ARR GM IMGYEQGPDYAVY G+Y GAGR + E D +P D PQ R Sbjct: 611 WYAAAKLARRDGMRIMGYEQGPDYAVYEGNYSAGAGRDANPWWREARADAGVPMDTPQQR 670 Query: 707 AQADLPGPLVTDEERRRYAASEAKPYKRFHYRDIAADYIMKSADALPARSQAFAAVLCQG 766 A+ADLPGP VT EER RYAASEA+P R+HYR IAADY MK+AD LPARSQAFAA LC+G Sbjct: 671 AEADLPGPFVTQEERVRYAASEARPNVRYHYRQIAADYAMKAADELPARSQAFAATLCRG 730 Query: 767 VNFVYYDQP-RAEQLYLRYVKEGAAVPFSADFGQNCVEPDFAAAARFPYVQAWRSTRRWV 825 +V D P RA +YLRYV +GA VPFS FG+ C EPDF +A+RF Y+QAW++ R Sbjct: 731 ARYVIDDTPERATAIYLRYVDQGAQVPFSGSFGRECPEPDFQSASRFHYIQAWKAWERAR 790 Query: 826 SQH 828 QH Sbjct: 791 KQH 793 >ref|YP_003976749.1| tetratricopeptide repeat family protein 3 [Achromobacter xylosoxidans A8] gb|ADP14034.1| tetratricopeptide repeat family protein 3 [Achromobacter xylosoxidans A8] Length = 823 Score = 556 bits (1434), Expect = e-156, Method: Composition-based stats. Identities = 415/794 (52%), Positives = 500/794 (62%), Gaps = 45/794 (5%) Query: 59 GAATVVACGPDFPLQLLDDRAGTLSNTPANSFAWEAAHLVTPADKLQADER----SGYEQ 114 GA V+ACGP+FP QLLDDRA TL TPANSF +EAA LV +D LQA E G Q Sbjct: 15 GAGIVIACGPEFPAQLLDDRAATLRATPANSFGYEAARLVGASDTLQAQEAYELPDGSYQ 74 Query: 115 AAGQPDDPRSLRMIEKGQLEGAQWAALQAMRAAPDGESAYAAGAALPPAIRLYTAGAQDF 174 P+D L AQ +AMRA PDGE AYA GA LP A+RLYTA A D Sbjct: 75 QNALPED-------RDPALTPAQRVTTRAMRAQPDGEQAYALGAGLPEALRLYTAAAVDT 127 Query: 175 RA-------NALAAARQRFEAVLALPPQQASERAVWAAFMLGRLHAIEERRAEAIASFTK 227 A L AR R+ A+L LPPQQA+ R+VWAA+ML + E A + + Sbjct: 128 HAARGADTDRLLEQARARYRAILQLPPQQAAARSVWAAYMLAEIGDEAELAASDADAQRQ 187 Query: 228 ARA--------LAVSGAPDPLGLAVASYGEQARLMLSGQSGPCNWSDFNEGRDCGETIPP 279 A A LA GAPDPLGLAVASYG++ARL L+G G C++ + C + IP Sbjct: 188 AAAQAYARARQLARDGAPDPLGLAVASYGQEARLFLAGPQGQCSYMELVNAEPCMDAIPA 247 Query: 280 ADFKQAIRLYAEQAARGSYNAQDSLTALAAWSLGHADISAALIDDPVAQRLLVAYALARV 339 A K A+R YAEQAAR S + SL LA W+L + LIDDPVAQRLLVAYALARV Sbjct: 248 ASLKHALRRYAEQAARDSASGNASLRMLAQWALDDPARTRKLIDDPVAQRLLVAYALARV 307 Query: 340 GDIAEGSGNGDSYYDPSAP--NSGSSGYPDAARSAKVKPNSVLVTLVDALKRRGLEKIEG 397 GDI +G DS DP A +G +G+ DAA+ +V PN L +LV AL+ + L+++ Sbjct: 308 GDIVDG--RPDSATDPYAAYDTTGQAGFADAAQGHEVTPNPALQSLVAALETQDLKQVLD 365 Query: 398 ADRVAALAYRTGRYDLAATLANRQETALSWWVRAKLALRKGDTAAAVQAYARAAQGFPRN 457 ADRVAALAYR GRYDLA TLA R +T L+WWVRAKLALR+GDT AA QAYA+AA FPR Sbjct: 366 ADRVAALAYRIGRYDLAQTLAARLDTGLAWWVRAKLALRQGDTQAAAQAYAQAASAFPRA 425 Query: 458 DASLDPSNANLLMGEQGVLTLSRGQYVEALAQFHRAATQSARQNRGYYSASYGDYYNDLA 517 D S++ +A L+GEQGVLTLSRGQYVEAL Q AT R G++ ++ Y+ND A Sbjct: 426 DGSVEGPSAARLLGEQGVLTLSRGQYVEALDQLLH-ATVPDRSVGGFWQST--PYWNDAA 482 Query: 518 YVAERVLSTDELKTYVDAHAPASPMPSAQAVQAKAAQQQGRPSLRWVALELAPLTVEDNL 577 YVAERVL+T ELK YVD HAPA+ A P + LE P+T D L Sbjct: 483 YVAERVLTTPELKAYVDRHAPAA--------AAAVGSAPPDPQHFYKWLEEHPVTASDRL 534 Query: 578 RQLLARRLVREGRVEEALPYFPDERDERFVQSSYDDQGRETPVTWRVRAKAREYGQALER 637 R LLARRLVREG + +ALPYFP + D R+V Y D G+ R R A EYG AL + Sbjct: 535 RLLLARRLVREGSIAQALPYFPADSDARYVTLDYVD-GKLELRQQRSRQLAAEYGAALRK 593 Query: 638 AHHAWRATSRAQGWYEAAVIARRQGMEIMGYEQGPDYAVYGGSYPGGAGRGI--GMYGNE 695 A AW T+RA+ W+ A+ +ARR GMEIMGYEQ PD+A YGG+ GAGR G + Sbjct: 594 AGSAWGRTTRAEAWFGASRLARRDGMEIMGYEQEPDFATYGGNTAYGAGRSAVPGSTAAD 653 Query: 696 DKPLPDNPQARAQADLPGPLVTDEERRRYAASEAKPYKRFHYRDIAADYIMKSADALPAR 755 PD P RA A LPGP VT+EERRRYAASEA+PY RFHYR IAA++ +++AD LP R Sbjct: 654 GTDPPDTPALRAAAALPGPFVTEEERRRYAASEAQPYTRFHYRQIAANHALRAADELPRR 713 Query: 756 SQAFAAVLCQGVNFVYYDQP-RAEQLYLRYVKEGAAVPFSADFGQNCVEPDFAAAARFPY 814 SQAFAAVLCQG ++ D P +A +Y RY+++GA VPFS FG+ C PDF AAA F Y Sbjct: 714 SQAFAAVLCQGTRYIIDDSPEQASAIYRRYIEQGAQVPFSGSFGRECAAPDFQAAAWFHY 773 Query: 815 VQAWRSTRRWVSQH 828 QA +S R H Sbjct: 774 TQAEKSWERLRRNH 787 >gb|ADV53472.1| TPR repeat-containing protein [Shewanella putrefaciens 200] Length = 757 Score = 270 bits (691), Expect = 7e-70, Method: Composition-based stats. Identities = 253/837 (30%), Positives = 376/837 (44%), Gaps = 147/837 (17%) Query: 56 LVLGAATVVACGPDFPLQLLDDRAGTLSNTPANSFAWEAAHLVTPADKLQADERSGYEQA 115 L L + ++ACGPDFPLQL DR G L P SF+ + L P D + E Sbjct: 28 LSLFSPMLLACGPDFPLQLTQDRQGNLIYLPQTSFSQQLTSLAKPLPWQYQDAAASQEYL 87 Query: 116 AGQPDDP--RSLRMIEKGQLEGAQWAALQAMRAAPD----GESAYAAGAALPPAIRLYTA 169 + + R E +L A A + +R A + A LP A+ YT Sbjct: 88 WDEVNHRYLSQTRAFEHTELSEAHLAQVNTLRNAQGPVEAEQMATELDQMLPQALIWYTL 147 Query: 170 GAQDFRANALAAARQRFEAVLALPPQQASERAVWAAFMLGRLHAIEERRAEAIASFTKAR 229 GA F A A + F V+ LP Q+ + R++WA + L R+ I + + F +A Sbjct: 148 GAVAFNAKDYDRASRYFTKVIELPEQERASRSLWALYSLSRIELILSKTSSDPEHFNRAN 207 Query: 230 AL-------AVSGAPDPLGLAVASYGEQARLMLSGQSGPCNWSDFNEGRDCGE-TIPPAD 281 A GA DPL L+++S GEQA ++L +D +E + T+ PA Sbjct: 208 AYLMQLQTEVAQGAADPLRLSLSSLGEQAYILLHQGQALSQSADTDEPHTTRQVTLDPAA 267 Query: 282 FKQAIRLYAEQAARGSYNAQDSLTALAAWSLGHADIS-AALIDDPVAQRLLVAYALARVG 340 +AI LYA Q+A+G + DSL L+ + L+ Q+LL+AY + Sbjct: 268 LDKAIALYATQSAQGDSSGYDSLLMLSRTLMTKETAELKPLLQQASIQQLLIAYWQSSTN 327 Query: 341 DIAEGSGNGDSYYDPSAPNSGSSGYPDAARSAKVKPNSVLVTLVDALKRRGLEKIEGADR 400 + A YD G + +++ GL+ +G D+ Sbjct: 328 EFA---------YDGQLSEMGLK----------------IASILKVFPTDGLQLTQG-DK 361 Query: 401 VAALAYRTGRYDLAATL-ANRQETALSWWVRAKLALRKGDTAAAVQAYARAAQGFPRND- 458 +AA+ Y+ G Y A L A ++ LSWW+ AKL L+KGD A +AYA+A FP + Sbjct: 362 LAAIYYQLGDYASAERLLALAPKSGLSWWLTAKLMLQKGDKTEAAKAYAQAVHHFPAQNT 421 Query: 459 ---------------ASLDPSNANLLMGEQGVLTLSRGQYVEALAQFHRAATQSARQNRG 503 A + + + EQGVL+L RG+Y++AL Q Sbjct: 422 LIATDTQETQQQAIHADEEQATYCRIRAEQGVLSLERGEYIDALQQL------------- 468 Query: 504 YYSASYGDYYNDLAYVAERVLSTDELKTYVDAHAPASPMPSAQAVQAKAAQQQGRPSLRW 563 AS +Y+ D+AYVAERVL+T ELK ++D P+ A + S + Sbjct: 469 --LASGNEYWQDIAYVAERVLTTAELKQFIDKQVPS------------IAFDYPKDSDWY 514 Query: 564 VALELAPLTVEDNLRQLLARRLVREGRVEEALPYFPDERDERFVQSSYDDQGRETPVTWR 623 ++E + + LR LL RRL+REG ++EA YFP+ Sbjct: 515 DSIE----PINNQLRYLLGRRLLREGALKEAPAYFPNPN--------------------- 549 Query: 624 VRAKAREYGQALERAHHAWRATSRAQGWYEAAVIARRQGMEIMGYEQGPDYAVYGGSYPG 683 + A A+ YG+AL A HA + A+ ++ AA +AR QGMEI+G+E PDYA+Y G + Sbjct: 550 MNASAQAYGKALTTAQHA-KGIESAKAYWTAAELARHQGMEILGFELAPDYAIYQGMF-- 606 Query: 684 GAGRGIGMYGNEDKPLPDNPQARAQADLPG----PLVTDEERRRYAASEAKPYKRFHYRD 739 DL G + ++E++R AS+A P KRFHYR Sbjct: 607 --------------------------DLTGWNEAAKLAEQEQQRVNASQAIPDKRFHYRY 640 Query: 740 IAADYIMKSADALPARSQAFAAVLCQGVNFVYY-DQPRAEQLYLRYVKEGAAVPFSADFG 798 AAD K+AD +P SQA+AA+LCQ ++ Y D A++ Y +YV G VP++ FG Sbjct: 641 QAADLANKAADLVPHNSQAYAALLCQATGWILYRDNELAQRYYQKYVANGPFVPWAEHFG 700 Query: 799 QNCVEPDFAAAARFPYVQAWRSTRRWVSQHRALSAALLLGAAVGAGFGVAQWRRRRR 855 C PDF +A + + +W + + L ++ G W RRR+ Sbjct: 701 LQCQTPDFDSAIK---REQANQAAKWNALYHKLKKPVVFGLLAITSLMGVWWIRRRK 754