BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.4697.p (295 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777129.1| short-chain dehydrogenase [Herbaspirillum se... 520 e-146 ref|YP_004750961.1| putative oxidoreductase [Collimonas fungivor... 374 e-101 ref|YP_933236.1| short-chain dehydrogenase family protein [Azoar... 356 3e-96 ref|ZP_07707496.1| short-chain dehydrogenase/reductase SDR [Baci... 351 6e-95 ref|ZP_07113840.1| oxidoreductase [Oscillatoria sp. PCC 6506] >g... 346 2e-93 >ref|YP_003777129.1| short-chain dehydrogenase [Herbaspirillum seropedicae SmR1] gb|ADJ65221.1| short-chain dehydrogenase protein [Herbaspirillum seropedicae SmR1] Length = 369 Score = 520 bits (1340), Expect = e-146, Method: Composition-based stats. Identities = 272/295 (92%), Positives = 283/295 (95%) Query: 1 MGDPTMEDSMSDHKPEGLPPQHQTHQPGSEQEMHPRPHSAPAGQPGRRLAGKVALITGGD 60 M D +MEDSMS + + LP QHQ+HQPGSEQ+M PRPHSAPAG+PGRRLAGKVALITGGD Sbjct: 75 MNDHSMEDSMSKTEIDALPAQHQSHQPGSEQQMEPRPHSAPAGEPGRRLAGKVALITGGD 134 Query: 61 SGIGRAVALAYAREGARLAIVYLDEEEDARQTQKDIQALDAPCLLIPGDVGSPEFCRSAV 120 SGIGRAVALAYAREGARLAIVYLDEEEDARQTQKD+QALDAPCLL+PGDVGSPEFCRSAV Sbjct: 135 SGIGRAVALAYAREGARLAIVYLDEEEDARQTQKDVQALDAPCLLLPGDVGSPEFCRSAV 194 Query: 121 RSVMDAYGRLDVLVNNAAQQYPAQSIEQISAEQLEHTFRTNIFSMFYLVKEAMPFLTRGA 180 R+VMDAYGRLDVLVNNAAQQYPAQSIE+IS QLEHTFRTNIFSMFY+VKEAMPFLTRGA Sbjct: 195 RAVMDAYGRLDVLVNNAAQQYPAQSIEEISQAQLEHTFRTNIFSMFYMVKEAMPFLTRGA 254 Query: 181 RIINTTSVTAYRGSKHLVDYAATKGAIVAFTRSLSQQLAPAGIHVNAVAPGPIWTPLIPA 240 RIINTTSVTAYRGSKHLVDYAATKGAIVAFTRSLSQQLA AGIHVNAVAPGPIWTPLIPA Sbjct: 255 RIINTTSVTAYRGSKHLVDYAATKGAIVAFTRSLSQQLASAGIHVNAVAPGPIWTPLIPA 314 Query: 241 SFSEEEVASFGKNVPLGRPGQPDEVAPAYVFLATEGASYMTGQVLHPNGGEIVNT 295 SFS EEVASFGKNVPLGRPGQPDEVAPAYVFLATEGASYMTGQVLHPNGGEIVNT Sbjct: 315 SFSAEEVASFGKNVPLGRPGQPDEVAPAYVFLATEGASYMTGQVLHPNGGEIVNT 369 >ref|YP_004750961.1| putative oxidoreductase [Collimonas fungivorans Ter331] gb|AEK60138.1| putative oxidoreductase [Collimonas fungivorans Ter331] Length = 327 Score = 374 bits (959), Expect = e-101, Method: Composition-based stats. Identities = 195/278 (70%), Positives = 223/278 (80%), Gaps = 1/278 (0%) Query: 18 LPPQHQTHQPGSEQEMHPRPHSAP-AGQPGRRLAGKVALITGGDSGIGRAVALAYAREGA 76 L PQHQ+HQPGSE M P P S P A + G +LA KVALITGGDSGIGRA+ALAYA EGA Sbjct: 49 LHPQHQSHQPGSEAAMEPTPRSDPLARKTGGKLADKVALITGGDSGIGRAIALAYAAEGA 108 Query: 77 RLAIVYLDEEEDARQTQKDIQALDAPCLLIPGDVGSPEFCRSAVRSVMDAYGRLDVLVNN 136 +AIVYLDE DA++T ++ L CLL+ GDVG C V V+ +GRLD+LVNN Sbjct: 109 SVAIVYLDEHADAKETMYMVEELGGQCLLLDGDVGDENSCIRMVEQVIAKFGRLDILVNN 168 Query: 137 AAQQYPAQSIEQISAEQLEHTFRTNIFSMFYLVKEAMPFLTRGARIINTTSVTAYRGSKH 196 A QQ+P IE ISAEQLE TFRTNIFSMF++VK A P+L GARIINT SVTAYRGS+ Sbjct: 169 AGQQFPQAHIEDISAEQLEKTFRTNIFSMFFMVKAAKPYLRAGARIINTASVTAYRGSER 228 Query: 197 LVDYAATKGAIVAFTRSLSQQLAPAGIHVNAVAPGPIWTPLIPASFSEEEVASFGKNVPL 256 L+DY+ATKGAIVAFTRSL+QQL IHVNAVAPGP+WTPLIPASFS +EVA FGK+VP+ Sbjct: 229 LLDYSATKGAIVAFTRSLAQQLLEDEIHVNAVAPGPVWTPLIPASFSADEVARFGKDVPM 288 Query: 257 GRPGQPDEVAPAYVFLATEGASYMTGQVLHPNGGEIVN 294 RPGQP+EVAP YVFLATEGASYM+GQVLHPNGGEI+N Sbjct: 289 KRPGQPNEVAPCYVFLATEGASYMSGQVLHPNGGEIIN 326 >ref|YP_933236.1| short-chain dehydrogenase family protein [Azoarcus sp. BH72] emb|CAL94349.1| Short-chain dehydrogenase family protein [Azoarcus sp. BH72] Length = 288 Score = 356 bits (913), Expect = 3e-96, Method: Composition-based stats. Identities = 184/290 (63%), Positives = 224/290 (77%), Gaps = 4/290 (1%) Query: 6 MEDSMSDHKPEGLPPQHQTHQPGSEQEMHPRPHSAPAGQPGR-RLAGKVALITGGDSGIG 64 M D S H+ LPPQHQ QPG E EM P+P G G +LAGKVA+ITGGDSGIG Sbjct: 1 MSDKDSGHR---LPPQHQDEQPGRENEMRPQPEDRMHGYRGSDKLAGKVAIITGGDSGIG 57 Query: 65 RAVALAYAREGARLAIVYLDEEEDARQTQKDIQALDAPCLLIPGDVGSPEFCRSAVRSVM 124 RAVA+A+A+EGA +A+ YL+E EDA QT+++++ CLL+ GD+G+ F V + Sbjct: 58 RAVAIAFAKEGADVAVAYLEEHEDAEQTRREVELQGRRCLLMAGDIGNESFTAKLVEQTL 117 Query: 125 DAYGRLDVLVNNAAQQYPAQSIEQISAEQLEHTFRTNIFSMFYLVKEAMPFLTRGARIIN 184 A+GRLD++VNNAA+Q+P ++ E IS EQLE TFRTN+FSMF L + A+P L +GA IIN Sbjct: 118 SAFGRLDIVVNNAAEQHPQENFEDISREQLERTFRTNLFSMFDLCRHALPHLQQGACIIN 177 Query: 185 TTSVTAYRGSKHLVDYAATKGAIVAFTRSLSQQLAPAGIHVNAVAPGPIWTPLIPASFSE 244 TTSVTAYRGS HL+DY+ATKGAIV+FTRSL+Q LA I VNAVAPGPIWTPLIPA+F Sbjct: 178 TTSVTAYRGSAHLIDYSATKGAIVSFTRSLAQALAAKRIRVNAVAPGPIWTPLIPATFKA 237 Query: 245 EEVASFGKNVPLGRPGQPDEVAPAYVFLATEGASYMTGQVLHPNGGEIVN 294 EEV FG PLGRPGQPDEVAP++VFLA++ ASY+TGQVLHPNGGEIVN Sbjct: 238 EEVEKFGAKEPLGRPGQPDEVAPSFVFLASQDASYVTGQVLHPNGGEIVN 287 >ref|ZP_07707496.1| short-chain dehydrogenase/reductase SDR [Bacillus sp. m3-13] Length = 287 Score = 351 bits (901), Expect = 6e-95, Method: Composition-based stats. Identities = 176/286 (61%), Positives = 220/286 (76%), Gaps = 1/286 (0%) Query: 10 MSDHKPEGLPPQHQTHQPGSEQEMHPRPHSAPAGQPG-RRLAGKVALITGGDSGIGRAVA 68 M++ + + LPPQHQ QPG E EM P+P S + G +L KVA+ITGGDSGIGRAVA Sbjct: 1 MTNQQKQTLPPQHQNQQPGIESEMTPKPKSEDSTYKGSEKLKDKVAIITGGDSGIGRAVA 60 Query: 69 LAYAREGARLAIVYLDEEEDARQTQKDIQALDAPCLLIPGDVGSPEFCRSAVRSVMDAYG 128 + YA+EGA + +VYL+E EDA++TQ+ ++A C LI GD+G FC+ V M + Sbjct: 61 IYYAKEGADVVVVYLNEHEDAKETQRQVKAEGRKCHLIAGDIGEEAFCKQIVDETMANFS 120 Query: 129 RLDVLVNNAAQQYPAQSIEQISAEQLEHTFRTNIFSMFYLVKEAMPFLTRGARIINTTSV 188 ++D+LVNNAA+Q+P +SIE I+A QLE TFRTNIFS FYL K A+PFL G+ IINT SV Sbjct: 121 KIDILVNNAAEQHPQESIEDITAVQLEKTFRTNIFSFFYLTKAALPFLASGSCIINTASV 180 Query: 189 TAYRGSKHLVDYAATKGAIVAFTRSLSQQLAPAGIHVNAVAPGPIWTPLIPASFSEEEVA 248 TAY G++ LVDY+ATKGAIVAFTRSL+ QL GI VN VAPGPIWTPLIP++FS +VA Sbjct: 181 TAYAGNELLVDYSATKGAIVAFTRSLALQLVGKGIRVNGVAPGPIWTPLIPSTFSSGKVA 240 Query: 249 SFGKNVPLGRPGQPDEVAPAYVFLATEGASYMTGQVLHPNGGEIVN 294 SFG N P+ RPGQP+EVAP+YVFLA++ ASYMTGQ+LH NGG+IVN Sbjct: 241 SFGANTPMKRPGQPEEVAPSYVFLASDDASYMTGQMLHVNGGKIVN 286 >ref|ZP_07113840.1| oxidoreductase [Oscillatoria sp. PCC 6506] emb|CBN59038.1| oxidoreductase [Oscillatoria sp. PCC 6506] Length = 286 Score = 346 bits (888), Expect = 2e-93, Method: Composition-based stats. Identities = 178/282 (63%), Positives = 218/282 (77%), Gaps = 1/282 (0%) Query: 14 KPEGLPPQHQTHQPGSEQEMHPRPHSAPAGQPGR-RLAGKVALITGGDSGIGRAVALAYA 72 + + LP QHQ +PGSE +M P P S A G +L GKVALITGGDSGIGRAVA+A+A Sbjct: 4 QEQTLPAQHQEQRPGSEAQMTPPPESQAAEYRGSDKLRGKVALITGGDSGIGRAVAIAFA 63 Query: 73 REGARLAIVYLDEEEDARQTQKDIQALDAPCLLIPGDVGSPEFCRSAVRSVMDAYGRLDV 132 +EGA +AI YL+E EDA+QTQ+ I+ CL I GDVG FC+ V + A+G LD+ Sbjct: 64 KEGAEVAIAYLNEHEDAKQTQQLIEEQGRRCLAIAGDVGDESFCQKLVEQTVKAFGHLDI 123 Query: 133 LVNNAAQQYPAQSIEQISAEQLEHTFRTNIFSMFYLVKEAMPFLTRGARIINTTSVTAYR 192 L+NNAA+Q+P +SIE I+AEQLE TFRTNIFSMFYL K A+ L G+ IINTTSVTAY+ Sbjct: 124 LINNAAEQHPQESIEDITAEQLERTFRTNIFSMFYLTKAALKHLKEGSAIINTTSVTAYK 183 Query: 193 GSKHLVDYAATKGAIVAFTRSLSQQLAPAGIHVNAVAPGPIWTPLIPASFSEEEVASFGK 252 G++ L+DY++TKGAIVAFTRSLS LA I VN VAPGPIWTPLIP++F EE+V FG Sbjct: 184 GNQQLLDYSSTKGAIVAFTRSLSGSLAKKEIRVNGVAPGPIWTPLIPSTFPEEKVEKFGA 243 Query: 253 NVPLGRPGQPDEVAPAYVFLATEGASYMTGQVLHPNGGEIVN 294 N PLGR GQPDEVAP YVFLA++ +SYMTGQ+LHPNGG+++N Sbjct: 244 NTPLGRAGQPDEVAPCYVFLASKDSSYMTGQILHPNGGDVIN 285