BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.4684.p (1071 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777121.1| two component hybrid sensor histidine kinase... 1323 0.0 gb|AEH11983.1| multi-sensor hybrid histidine kinase [Shewanella ... 470 e-130 ref|YP_001346367.1| putative sensor/response regulator hybrid [P... 447 e-123 gb|EGM19475.1| putative sensor/response regulator hybrid [Pseudo... 439 e-120 ref|YP_789010.1| putative sensor/response regulator hybrid [Pseu... 439 e-120 >ref|YP_003777121.1| two component hybrid sensor histidine kinase/response regulator protein [Herbaspirillum seropedicae SmR1] gb|ADJ65213.1| two component hybrid sensor histidine kinase/response regulator protein [Herbaspirillum seropedicae SmR1] Length = 1524 Score = 1323 bits (3423), Expect = 0.0, Method: Composition-based stats. Identities = 741/1096 (67%), Positives = 847/1096 (77%), Gaps = 47/1096 (4%) Query: 1 MFPLRDGAGRQIGKAFMLRDVTREKRIERQLHRINEELELTVQQRTHALHQAKTMLQTVL 60 +F L D AGR +GKAFMLRD+T EK IERQL RINEELE TVQQRT ALHQAKTMLQTVL Sbjct: 447 VFALHDRAGRAVGKAFMLRDITHEKNIERQLQRINEELEWTVQQRTQALHQAKTMLQTVL 506 Query: 61 NVMPSLVGYWDKHLINRFANASYERVFGREHGEITGMYMLDLVGTELFESAMPHIDAVLA 120 NVMPSLV YWD+HLIN FANA+YER F RE G++ G+YM DLVG LFE A+PHI VLA Sbjct: 507 NVMPSLVAYWDRHLINHFANAAYERAFQREAGQLNGVYMPDLVGPALFEKALPHIKGVLA 566 Query: 121 GEKQTFERTFTDAVNGYKHVLTTYIPDVNEQGEVNGFYVVAHDVTEITHNRNQLSEALAQ 180 G +QTFER+ D V G +H+LTTYIP++ + GEV GFYVVAHDVTEITHNRNQLSE LAQ Sbjct: 567 GAQQTFERSVDDPVLGARHMLTTYIPEIGDLGEVTGFYVVAHDVTEITHNRNQLSETLAQ 626 Query: 181 NQSLPDQVQQSNALLNNVLSSATGVAIIATAPDGVITLFNRGAERMLGYRAEDVIGQMKE 240 NQSL DQVQ +N LLNNVLSSA GVAIIAT +G++TLFN GAE+MLGYRAEDV+G++KE Sbjct: 627 NQSLLDQVQDANTLLNNVLSSAKGVAIIATDTEGLVTLFNSGAEQMLGYRAEDVVGKLKE 686 Query: 241 ETFSGRLNHPAIRAPAPLDEKAVSDLRYRRKDGVTLPVTRQQTSMLDHRQRHIGDLYIAM 300 E FS R P P + + ++L YRR DG TLPV RQQTSM DHRQRH+G LYIA+ Sbjct: 687 EHFSSR---PEAALPG---QDSHTELLYRRHDGATLPVARQQTSMFDHRQRHLGYLYIAL 740 Query: 301 DMSLQRQQEAELAATRDQLMLAAEVAKLGVWVWDRTGDTFEFNRQIAEIYGIGD-GRSGQ 359 D+SLQRQQ + LAA RDQL+LAAEVAKLGVWVWD+ D E+N Q+AEIYG GD G + + Sbjct: 741 DVSLQRQQASALAAARDQLVLAAEVAKLGVWVWDKDSDVLEYNPQVAEIYGFGDRGGAPR 800 Query: 360 VTTYEGWRRRVHPDDVGYVESALQAALAGTGEFEPVFRVVRADGSIRFVQARAHVDRNGM 419 V+TY WRRRVHPDDV YVE L+A LA G+ EPVFRVVR DG IR+VQARA+V R+G Sbjct: 801 VSTYADWRRRVHPDDVDYVEKTLRAGLAVDGDHEPVFRVVRDDGGIRYVQARAYVQRDGA 860 Query: 420 GAPVRVIGINLDITQRIEFENNLVEARLKAEQANSAKSLFLASVSHEIRTPMNGVLGMIQ 479 G PVRVI INLDITQRIEFENNLV+ARLKAEQANSAKSLFLASVSHEIRTPMNGVLGMIQ Sbjct: 861 GRPVRVICINLDITQRIEFENNLVDARLKAEQANSAKSLFLASVSHEIRTPMNGVLGMIQ 920 Query: 480 LLQRTQPQPAQQDYLDKAEISAKSLLNLLNDLLDFSKMDAQQVQLDLQAFSLEHFRHDLT 539 LLQRTQP PAQQDYLDKAEISAKSLLNLLNDLLDFSKMDA+Q+QLDLQAF LE F H+L Sbjct: 921 LLQRTQPLPAQQDYLDKAEISAKSLLNLLNDLLDFSKMDAKQLQLDLQAFELERFGHNLA 980 Query: 540 AILAGNPPQEGVSLHIELDGDLPQRVVGDVYRLQQVLVNLISNALKFTHLGRIDVALRRL 599 A+LAG+PPQ GVSLHI LD LP+R+VGD +RLQQVLVNL NALKFTH G IDV RL Sbjct: 981 AVLAGSPPQAGVSLHIALDPQLPRRLVGDAHRLQQVLVNLTGNALKFTHQGHIDVHFTRL 1040 Query: 600 AADNTRQVMLRVEVSDTGIGIAPERLKDIFDAFTQAEASTTRRYGGTGLGLAISRHLVQL 659 R V LRVEVSDTGIGIA +RL DIFDAFTQAEASTTRRYGGTGLGLAIS+HLV L Sbjct: 1041 DPLPGRTVALRVEVSDTGIGIAADRLDDIFDAFTQAEASTTRRYGGTGLGLAISKHLVGL 1100 Query: 660 MGGQLQVSSEPGRGSRFWFDLPMEIEDATPLS----------QARAADEHTQAEHAPAGE 709 MGGQLQVSSEPGRGSRFWFDL + ++D + L Q A HT AP E Sbjct: 1101 MGGQLQVSSEPGRGSRFWFDLQLAVDDDSVLGPAAADDAARPQPLQAASHTAGSRAP--E 1158 Query: 710 TARE------LEGVQILLVEDNAVNRQVATGLLSLYGAHISCAENGSTGVAMACDPERHY 763 TAR L+GVQILLVEDN VNRQVA+ LL+L GA ++CA++GS GVAMACDP RH+ Sbjct: 1159 TARSAPDAQCLQGVQILLVEDNPVNRQVASELLALSGAQVTCADSGSMGVAMACDPARHF 1218 Query: 764 DLILMDLQMPGIDGIEATRRIRRQQDLRHIPILAMTANASPEDRRRCIAAGMAGHIAKPI 823 DL+LMDLQMPG+DGIEATRRIR Q +LR +PILAMTANASPED++RCI AGMAGHIAKPI Sbjct: 1219 DLVLMDLQMPGMDGIEATRRIRGQYELRGLPILAMTANASPEDKQRCIEAGMAGHIAKPI 1278 Query: 824 DVSTLVPTLLSHLQHDRSI--AAQETLPAEATRVDVQPADRQQVDVYADLMRRYRQASDV 881 D++TL+P LL+HL H+R + AA + +P + DR V+ Y+ ++ R++QASD+ Sbjct: 1279 DIATLIPVLLAHLHHERPVPEAAPQAVPQDLAD------DRLSVEDYSSILHRFQQASDI 1332 Query: 882 YRTTLDAAGPELERLFADYDAAL------AQASPGGIEQAAHALKGLCATIGASGLAAYF 935 YRTTLDAAGPELERL A Y AAL AQ + + QA+HAL+G+ ATIGA GLAAYF Sbjct: 1333 YRTTLDAAGPELERLLAQYCAALAMSPEQAQEAMAALAQASHALRGVTATIGARGLAAYF 1392 Query: 936 AGIERVCRAGEG--VPSDRLFPAWREELGAVRRDAGVVLQQLAMQALQGVSGSPGPAAPQ 993 +E+ CR P R E+ A + DA +V Q+L MQAL+ A+ Sbjct: 1393 GALEQRCRQAMAGRTPDLDWLERCRTEMDACQHDAMLVRQRLVMQALRPP------ASDA 1446 Query: 994 AVAEPATATAEASDFPDRQALRALLLSSNLEALDLAEAIGKRHGLMQQTRYQQLWELIEK 1053 A A AT ASDFPDRQ LR LLLS+NLEALDL E +GKRHGL QQ Y+QL LIEK Sbjct: 1447 GPAAAALATVAASDFPDRQRLRELLLSNNLEALDLIETLGKRHGLTQQEPYRQLNRLIEK 1506 Query: 1054 LDFPAALAYLDDHFGE 1069 LDF AAL LD HFG+ Sbjct: 1507 LDFAAALTCLDHHFGD 1522 >gb|AEH11983.1| multi-sensor hybrid histidine kinase [Shewanella baltica OS117] Length = 1629 Score = 470 bits (1209), Expect = e-130, Method: Composition-based stats. Identities = 313/828 (37%), Positives = 468/828 (56%), Gaps = 74/828 (8%) Query: 3 PLRDGAGRQIGKAFMLRDVTREKRIERQLHRINEELELTVQQRTHALHQAKTMLQTVLNV 62 P+ D G+ G + +RD+T + ER + +N LE V +RTHAL QA QT+L+ Sbjct: 440 PIYDEHGKIAGMSQTIRDITAQLEAERHILSLNASLERQVTKRTHALQQALLENQTLLDT 499 Query: 63 MPSLVGY--WDKHLINRFANASYERVFGREHGEITGMYMLDLVGTE---LFESAMPHIDA 117 + + Y D + + N ++ R+ G ++ G L E F AM Sbjct: 500 INQQLLYSVTDPNGVILEVNDNFCRISGYSREQLVGKTHAILKSGEHDASFWRAM--WQQ 557 Query: 118 VLAGEKQTFERTFTDAVNGYKHVLTTYIPDVNEQGEVNGFYVVAHDVTEITHNRNQLSEA 177 + AG+ E D K T P +E G++ F + D+T+ +L+ Sbjct: 558 INAGQSWHGEICNLDKHQTLKWFDTVIGPVFDEYGKIERFVALRIDITD-----RKLT-- 610 Query: 178 LAQNQSLPDQVQQSN--ALLNNVLSSATGVAIIATAPDGVITLFNRGAERMLGYRAEDVI 235 Q++++N +LL NVL +A+ ++IIAT G IT+FNRGAER+LGY AE++I Sbjct: 611 ---------QIEKNNLGSLLTNVLDAASEMSIIATDVQGNITIFNRGAERLLGYSAEEMI 661 Query: 236 GQMKEETFSGRLNHPAIRAPAPLDEKAVSDLR--------------------YRRKDGVT 275 GQ L A+ A L + D++ Y RKDG Sbjct: 662 GQSTPAPL--HLLEEAMIRSAELSAEYGKDIQGFDVFIYKARAEGSETRNWTYVRKDGSQ 719 Query: 276 LPVTRQQTSMLDHRQRHIGDLYIAMDMSLQRQQEAELAATRDQLMLAAEVAKLGVWVWDR 335 V+ T+M D IG L I +D+SL Q+ L + L AAEVA+LG+W W+ Sbjct: 720 FQVSLSVTAMRDSVGEIIGYLGIGVDISLMLLQQQALMTASNHLSKAAEVAQLGIWTWNL 779 Query: 336 TGDTFEFNRQIAEIYGIGDGRSGQVTTYEGWRRRVHPDDVGYVESALQAALAGTGEFEPV 395 G++ E+N ++ IY + Q TYE W RVHPDD+ + ++ L+ A+ GT +++P+ Sbjct: 780 LGNSLEWNERMFAIYDQPESLREQGLTYEHWSMRVHPDDIAFADAKLKGAVEGTAQYDPI 839 Query: 396 FRVVRADGSIRFVQARAHVDRNGMGAPVRVIGINLDITQRIEFENNLVEARLKAEQANSA 455 FRVVR DGSIR+VQA A ++R+ G +RVIGINLDIT++ + E L EA+ +A+ A++A Sbjct: 840 FRVVRTDGSIRYVQAAAQIERDKQGHAIRVIGINLDITEQQQLEETLREAKQEADAASAA 899 Query: 456 KSLFLASVSHEIRTPMNGVLGMIQLLQRTQPQPAQQDYLDKAEISAKSLLNLLNDLLDFS 515 KS FLA++SHEIRTPMN VLGM+QL+Q T QQDY++K + +AKSLL LLND+LDFS Sbjct: 900 KSAFLANMSHEIRTPMNAVLGMLQLIQYTSLSRQQQDYVNKTQTAAKSLLGLLNDILDFS 959 Query: 516 KMDAQQVQLDLQAFSLEHFRHDLTAILAGNPPQEGVSLHIELDGDLPQRVVGDVYRLQQV 575 K+DA ++ LDL + S+E DL +L+GN + V + +LD LP ++ D RLQQ+ Sbjct: 960 KIDAGKLALDLHSCSIELLMRDLAVVLSGNHGDKDVEVMFDLDTALPPWLLADQLRLQQI 1019 Query: 576 LVNLISNALKFTHLGRIDVALR--RLAADNTRQVMLRVEVSDTGIGIAPERLKDIFDAFT 633 LVNL NALKFTH G++ V + R AD V +++ ++DTGIGI+ E+++ IF F Sbjct: 1020 LVNLAGNALKFTHHGQVIVGIECLRHEADT---VTVQISITDTGIGISDEQIERIFTGFE 1076 Query: 634 QAEASTTRRYGGTGLGLAISRHLVQLMGGQLQVSSEPGRGSRFWFDLPMEIEDATPLSQA 693 QAE+ST+RR+GGTGLGLAIS+ L+ LMG +LQV+S+ G GSRFWFD+ P+ Q Sbjct: 1077 QAESSTSRRFGGTGLGLAISKRLIGLMGSELQVTSKVGVGSRFWFDVTF------PIIQV 1130 Query: 694 RAADEHTQAEHAPAGETARELEGVQILLVEDNAVNRQVATGLLSLYGAHISCAENGSTGV 753 HT +L G ++L+V+DN + ++ +L+ +G + A G + + Sbjct: 1131 EET-RHT------------DLSGYRVLVVDDNELTVEILEKILTGFGCEVETALGGYSAL 1177 Query: 754 A---MACDPERHYDLILMDLQMPGIDGIEATRRIRRQQDLRHIPILAM 798 A + + +D++LMD +MP +DG++ +R P++ M Sbjct: 1178 AKVKQSHEKSTPFDVVLMDWRMPDLDGLQTAEMLRNSDANNQTPLVVM 1225 Score = 149 bits (377), Expect = 2e-33, Method: Composition-based stats. Identities = 120/375 (32%), Positives = 183/375 (48%), Gaps = 25/375 (6%) Query: 696 ADEHTQAEHAPAGETARELEGVQILLVEDNAVNRQVATGLLSLYGAHISCAENGSTGVAM 755 A E E P + R L G+ IL+VEDN +NRQV LLS GA++ AE G GV++ Sbjct: 1265 AIEGKTMEAHPQPRSQRFLAGLTILVVEDNQLNRQVIDELLSYEGANVVLAEGGMEGVSL 1324 Query: 756 ACDPERHYDLILMDLQMPGIDGIEATRRIRRQQDLRHIPILAMTANASPEDRRRCIAAGM 815 + +D+++MD+QMP +DG+EATRRIR +PILAMTANAS DR+ C+ AGM Sbjct: 1325 VLESGDLFDIVIMDMQMPDMDGLEATRRIRADGRFAALPILAMTANASQSDRQECLNAGM 1384 Query: 816 AGHIAKPIDVSTLVPTLLSHL-QHDRSIAAQETLPAEATRVDVQPADRQQVDVYADLMRR 874 H+ KPID+ L+P++L + + D + A E EAT+ + +D Q +D ++RR Sbjct: 1385 NDHVGKPIDMPLLLPSILRLVGREDMTSAEFEGHWPEATQ---EQSDEQLLDDIRLILRR 1441 Query: 875 YRQASDVYRTTLDAAGPELERLFADYDAALAQASPGGIEQAAHALKGLCATIGASGLAAY 934 + ++ + PE+ + A + + +H +KG+ + GA LAA+ Sbjct: 1442 FGGNQSFFQKMAKSFAPEMMKQLALFKQSTKIFDHSTAAAISHGIKGIASNFGARRLAAH 1501 Query: 935 FAGIERVCRAGEGVPSDRLFPAWREELGAVRRDAGVVLQQLAMQALQGVSGSPGPAAPQA 994 A +E + F EL ++R L++L Q+ Q +S A Sbjct: 1502 AAYLE------------KQFKQECPELIDIKRWTD-TLEELINQSSQQLSTYFEVEEFNA 1548 Query: 995 VAEPATATAEASDF------PDRQALRALLLSSNLEALDLAEAIGKRHGLMQQTRYQQLW 1048 V A S D L LL +NLEA+ L + + + L ++ L Sbjct: 1549 VISDNVEKAVYSSVSVQSVKTDLNTLMTLLKENNLEAMALTDQLAEL--LSGHPQWSILH 1606 Query: 1049 ELIEKLDFPAALAYL 1063 ++ LDF AL L Sbjct: 1607 GQVQALDFNQALDTL 1621 >ref|YP_001346367.1| putative sensor/response regulator hybrid [Pseudomonas aeruginosa PA7] gb|ABR84477.1| probable sensor/response regulator hybrid [Pseudomonas aeruginosa PA7] Length = 1418 Score = 447 bits (1149), Expect = e-123, Method: Composition-based stats. Identities = 312/789 (39%), Positives = 445/789 (56%), Gaps = 41/789 (5%) Query: 80 NASYERVFGREHGEITGMYMLDLVGTELFESAMPHIDAVLAGEKQ--TFERTFTDAVNGY 137 N E +FG E G ++DL+ ES I A +A +Q +F+ Sbjct: 371 NRGAEALFGYREEEAVGRRVVDLLVPPSKESEELDILARIARNEQVVSFDTVRRHQDGHL 430 Query: 138 KHVLTTYIPDVNEQGEVNGFYVVAHDVTEITHNRNQLSEALA----QNQSLPDQVQQSNA 193 V T P ++ +G V G D++ ++ E A Q ++++ N Sbjct: 431 LDVAVTVSPILDGEGRVVGASKTVRDISAKKAAEARIRELNAGLEHQVAERTAELRRLNV 490 Query: 194 LLNNVLSSATGVAIIATAPDGVITLFNRGAERMLGYRAEDVIGQM--------KEETFSG 245 LL +VL +A+ V+II DG+I+ FN GAERMLGYRAE+V+G++ +E G Sbjct: 491 LLGSVLQAASEVSIITLDRDGIISGFNLGAERMLGYRAEEVVGKVSPTLLHSERELLARG 550 Query: 246 R-LNHPAIRAPAPLDEKAVSDLR---YRRKDGVTLPVTRQQTSMLDHRQRHIGDLYIAMD 301 R L R E+ ++ R Y RKDG L VT T + D G L IA+D Sbjct: 551 RELGEQGFRVLVARAEREGAETREWTYLRKDGSPLSVTLSVTVLRDEAGAINGYLGIAVD 610 Query: 302 MSLQRQQEAELAATRDQLMLAAEVAKLGVWVWDRTGDTFEFNRQIAEIYGIGDGRSGQVT 361 ++ R E E+AA RDQL +AA+VA+LG+W W D+ ++N ++ E+YG Sbjct: 611 VTEWRNAEREMAAARDQLQMAADVARLGIWRWTLADDSLQWNERMCELYGQPLALREGGL 670 Query: 362 TYEGWRRRVHPDDVGYVESALQAALAGTGEFEPVFRVVRADGSIRFVQARAHVDRNGMGA 421 YE WR R+HP+D+ E++L+AA+ G G ++ +FRV+ DG IRF+QA A V+R+ G Sbjct: 671 VYEHWRSRLHPEDLERTEASLRAAVEGRGNYDVIFRVLLPDGGIRFIQAGAQVERDADGT 730 Query: 422 PVRVIGINLDITQRIEFENNLVEARLKAEQANSAKSLFLASVSHEIRTPMNGVLGMIQLL 481 P++V GIN+DIT + + L EA+ +A+ A++AKS FLA++SHEIRTPMN VLGM+QL Sbjct: 731 PLQVTGINIDITSDQQLQARLREAKEQADAASAAKSSFLANMSHEIRTPMNAVLGMLQLA 790 Query: 482 QRTQPQPAQQDYLDKAEISAKSLLNLLNDLLDFSKMDAQQVQLDLQAFSLEHFRHDLTAI 541 ++T Q+DYLDKA +A SLL LLND+LD+SK++A ++ L++ F LE DL + Sbjct: 791 RQTDLNERQRDYLDKASSAATSLLGLLNDILDYSKIEAGKLLLEMHPFELEPLMQDLAVV 850 Query: 542 LAGNPPQEGVSLHIELDGDLPQRVVGDVYRLQQVLVNLISNALKFTHLGRIDVALRRLAA 601 L+GN + V + ++D +LP VVGD RLQQ+L+NL NALKFT G + V+LRRLA Sbjct: 851 LSGNQGDKDVEVIFDIDPELPSAVVGDRLRLQQILINLAGNALKFTAHGHVLVSLRRLAH 910 Query: 602 DNTRQVMLRVEVSDTGIGIAPERLKDIFDAFTQAEASTTRRYGGTGLGLAISRHLVQLMG 661 D R V LRV V+DTGIGI+ E+ + IF+ FTQAEAST+RR+GGTGLGL I + LV LMG Sbjct: 911 DAHR-VGLRVLVADTGIGISAEQQQRIFEGFTQAEASTSRRFGGTGLGLFICKRLVDLMG 969 Query: 662 GQLQVSSEPGRGSRFWFDLPMEIEDATPLSQARAADEHTQAEHAPAGETARELEGVQILL 721 G+LQV S PG GSRFWFDL +++ PL A GE R +L+ Sbjct: 970 GRLQVESSPGSGSRFWFDLDLDVARGEPLRAACPG----------VGEPLR------LLV 1013 Query: 722 VEDNAVNRQVATGLLSLYGAHISCAENGSTGVA---MACDPERHYDLILMDLQMPGIDGI 778 +DN + ++ + G C +GS VA A R YD++LMD +MP +DG+ Sbjct: 1014 ADDNLIAGELLERTVGALGWRADCVGSGSEAVARVQAAMAEGRRYDVVLMDWRMPDLDGL 1073 Query: 779 EATRRIRRQQDLRHIPILAMTANASPE---DRRRCIAAGMAGHIAKPIDVSTLVPTLLSH 835 A + IR+ Q P++ M E D R A + KP+ L ++L Sbjct: 1074 SAAQLIRQLQGDLPPPMVIMITAYGREVLADARDHSAPPFVDFLTKPVTPKQLADSVLHA 1133 Query: 836 LQHDRSIAA 844 L ++ A Sbjct: 1134 LHGEQGAPA 1142 Score = 157 bits (398), Expect = 8e-36, Method: Composition-based stats. Identities = 114/307 (37%), Positives = 152/307 (49%), Gaps = 26/307 (8%) Query: 689 PLSQARAADEHTQAEHAPAGETARE----------LEGVQILLVEDNAVNRQVATGLLSL 738 P++ + AD A H G A L GV++L+VEDNA+NRQVA LLS Sbjct: 1120 PVTPKQLADSVLHALHGEQGAPANPPPRPQERPQRLRGVRLLVVEDNALNRQVAAELLSS 1179 Query: 739 YGAHISCAENGSTGVAMACDPERHYDLILMDLQMPGIDGIEATRRIRRQQDLRHIPILAM 798 GA +S A+ G GV + +D +LMD+QMP IDG+EATRRIR +PILAM Sbjct: 1180 EGARVSLADGGLAGVQQVLEAGVPFDAVLMDMQMPDIDGLEATRRIRADGRFAGLPILAM 1239 Query: 799 TANASPEDRRRCIAAGMAGHIAKPIDVSTLVPTLLSHLQHDRSIAAQETLPAEATRVDVQ 858 TANAS DR C+AAGM H+AKPID LV LL HL AA AE T + Sbjct: 1240 TANASLSDREACLAAGMDDHVAKPIDKERLVLCLLGHLGRSVDTAAVPAPAAETTEL--- 1296 Query: 859 PADRQQVDVYADLMRRYRQASDVYRTTLDAAGPELERLFADYDAALAQASPGGIEQAAHA 918 V+ D++ R+ + ++ L P+++ L + L + G H Sbjct: 1297 ------VEARGDIVGRFGGSLELIVQVLRRFVPDMQELLGQLERQLGEGDIQGCAATLHT 1350 Query: 919 LKGLCATIGASGLAAYFAGIERVCRAGEGVPSDRLFPAWREELGAVRRDAGVVLQQLAMQ 978 +KG AT+GAS LA +E R + P D E L +R D L+ +Q Sbjct: 1351 IKGSAATVGASALAGRAGELELALRRVD--PLDG-----AECLAGIRLDELRALRDTCLQ 1403 Query: 979 ALQGVSG 985 LQG+ G Sbjct: 1404 RLQGMFG 1410 >gb|EGM19475.1| putative sensor/response regulator hybrid [Pseudomonas aeruginosa 152504] Length = 1417 Score = 439 bits (1129), Expect = e-120, Method: Composition-based stats. Identities = 310/792 (39%), Positives = 441/792 (55%), Gaps = 47/792 (5%) Query: 80 NASYERVFGREHGEITGMYMLDLVGTELFESAMPHIDAVLAGEKQ--TFERTFTDAVNGY 137 N E +FG + G ++DL+ E+ I A +A ++Q +F+ Sbjct: 371 NRGAEALFGYREEQAVGRRVVDLLVPPSKENEELDILARIARKEQVVSFDTVRRHQDGHL 430 Query: 138 KHVLTTYIPDVNEQGEVNGFYVVAHDVTEITHNRNQLSEALAQNQSLPDQVQQS------ 191 V T P + G V G D++ ++ E N L Q+ + Sbjct: 431 LDVAVTVSPILGPDGGVVGASKTVRDISAKKAAEARIREL---NTGLEHQIAERTAELRR 487 Query: 192 -NALLNNVLSSATGVAIIATAPDGVITLFNRGAERMLGYRAEDVIGQMK------EETFS 244 N LL +VL +A+ V+II DG+I+ FN GAERMLGYRA++V+G+ E Sbjct: 488 LNVLLGSVLQAASEVSIITLDRDGIISGFNLGAERMLGYRADEVVGKASPTLLHSERELL 547 Query: 245 GR---LNHPAIRAPAPLDEKAVSDLR---YRRKDGVTLPVTRQQTSMLDHRQRHIGDLYI 298 R L R E+ ++ R Y RKDG L VT T + D G L I Sbjct: 548 ARGQELGEEGFRVLVARAEQEGAETREWTYLRKDGSPLSVTLSVTVLRDEAGAINGYLGI 607 Query: 299 AMDMSLQRQQEAELAATRDQLMLAAEVAKLGVWVWDRTGDTFEFNRQIAEIYGIGDGRSG 358 A+D++ R E E+AA RDQL +AA+VA+LG+W W+ D+ ++N ++ E+YG Sbjct: 608 AVDVTEWRNAEREMAAARDQLQMAADVARLGIWRWNLADDSLQWNERMCELYGQPLALRD 667 Query: 359 QVTTYEGWRRRVHPDDVGYVESALQAALAGTGEFEPVFRVVRADGSIRFVQARAHVDRNG 418 YE WR R+HP+D+ E++L+AA+ G G ++ +FRVV DG IRF+QA A V+R+ Sbjct: 668 GGLVYEHWRSRLHPEDLERTEASLRAAVEGRGNYDVIFRVVLPDGGIRFIQAGAQVERDA 727 Query: 419 MGAPVRVIGINLDITQRIEFENNLVEARLKAEQANSAKSLFLASVSHEIRTPMNGVLGMI 478 G P++V GIN+DIT + + L EA+ +A+ A++AKS FLA++SHEIRTPMN VLGM+ Sbjct: 728 DGNPLQVTGINIDITSDQQLQARLREAKEQADAASAAKSSFLANMSHEIRTPMNAVLGML 787 Query: 479 QLLQRTQPQPAQQDYLDKAEISAKSLLNLLNDLLDFSKMDAQQVQLDLQAFSLEHFRHDL 538 QL ++T Q+DYLDKA +A SLL LLND+LD+SK++A ++ L++ F LE DL Sbjct: 788 QLARQTDLNERQRDYLDKASSAATSLLGLLNDILDYSKIEAGKLVLEMLPFELEPLMQDL 847 Query: 539 TAILAGNPPQEGVSLHIELDGDLPQRVVGDVYRLQQVLVNLISNALKFTHLGRIDVALRR 598 +L+GN + V + ++D +LP VVGD RLQQ+L+NL NALKFT G + V+LRR Sbjct: 848 AVVLSGNQGDKDVEVIFDIDPELPSAVVGDRLRLQQILINLAGNALKFTARGHVLVSLRR 907 Query: 599 LAADNTRQVMLRVEVSDTGIGIAPERLKDIFDAFTQAEASTTRRYGGTGLGLAISRHLVQ 658 LA D V LRV V+DTGIGI+ E+ + IF+ FTQAEAST+RR+GGTGLGL I + LV Sbjct: 908 LAHD-AHLVRLRVLVADTGIGISAEQQQRIFEGFTQAEASTSRRFGGTGLGLFICKRLVD 966 Query: 659 LMGGQLQVSSEPGRGSRFWFDLPMEIEDATPLSQARAADEHTQAEHAPAGETARELEGVQ 718 LMGG+L+V S PG GSRFWFDL +++ PL A AGE R Sbjct: 967 LMGGELRVESAPGSGSRFWFDLDLDVAHDQPLRAACPG----------AGEPLR------ 1010 Query: 719 ILLVEDNAVNRQVATGLLSLYGAHISCAENGSTGVA---MACDPERHYDLILMDLQMPGI 775 +L+ +DN V ++ + G C +GS VA A R YD++LMD +MP + Sbjct: 1011 LLVADDNLVAGELLERTVGALGWRADCVGSGSEAVARVQAAMAEGRRYDVVLMDWRMPDL 1070 Query: 776 DGIEATRRIRRQQDLRHIPILAMTANASPE---DRRRCIAAGMAGHIAKPIDVSTLVPTL 832 DG+ A + IR+ Q P++ M E D R A + KP+ L ++ Sbjct: 1071 DGLSAAQLIRQLQGDLPPPMVIMITAYGREVLADARDHSAPPFVDFLTKPVTPKQLADSV 1130 Query: 833 LSHLQHDRSIAA 844 L L ++ A Sbjct: 1131 LHALHGEQGAPA 1142 Score = 152 bits (384), Expect = 3e-34, Method: Composition-based stats. Identities = 105/270 (38%), Positives = 144/270 (53%), Gaps = 24/270 (8%) Query: 689 PLSQARAADEHTQAEH----APAG------ETARELEGVQILLVEDNAVNRQVATGLLSL 738 P++ + AD A H APA E + L GV++L+VEDNA+NRQVA LLS Sbjct: 1120 PVTPKQLADSVLHALHGEQGAPANPPPRPVERTQRLRGVRLLVVEDNALNRQVAAELLSS 1179 Query: 739 YGAHISCAENGSTGVAMACDPERHYDLILMDLQMPGIDGIEATRRIRRQQDLRHIPILAM 798 GA ++ A+ G GV + +D +LMD+QMP IDG+EATRRIR +PILAM Sbjct: 1180 EGARVALADGGLAGVQQVLEASVPFDAVLMDMQMPDIDGLEATRRIRADGRFAGLPILAM 1239 Query: 799 TANASPEDRRRCIAAGMAGHIAKPIDVSTLVPTLLSHLQH--DRSIAAQETLPAEATRVD 856 TANAS DR C+AAGM H+AKPID LV LL HL DR A AT D Sbjct: 1240 TANASLADREACLAAGMNDHVAKPIDKERLVLCLLGHLGRSGDRG--------APATTAD 1291 Query: 857 VQPADRQQVDVYADLMRRYRQASDVYRTTLDAAGPELERLFADYDAALAQASPGGIEQAA 916 + V+ D++ R+ + ++ L P+++ LFA + L + G Sbjct: 1292 AG----ELVEARGDIVGRFGGSLELIVQVLRRFVPDMQDLFAQLERQLGEGDVQGSAATL 1347 Query: 917 HALKGLCATIGASGLAAYFAGIERVCRAGE 946 H +KG +T+GAS LA + +E+ R + Sbjct: 1348 HTIKGSASTVGASALAGRASELEQALRRAD 1377 >ref|YP_789010.1| putative sensor/response regulator hybrid [Pseudomonas aeruginosa UCBPP-PA14] gb|ABJ13382.1| putative sensor/response regulator hybrid [Pseudomonas aeruginosa UCBPP-PA14] Length = 1417 Score = 439 bits (1129), Expect = e-120, Method: Composition-based stats. Identities = 310/792 (39%), Positives = 441/792 (55%), Gaps = 47/792 (5%) Query: 80 NASYERVFGREHGEITGMYMLDLVGTELFESAMPHIDAVLAGEKQ--TFERTFTDAVNGY 137 N E +FG + G ++DL+ E+ I A +A ++Q +F+ Sbjct: 371 NRGAEALFGYREEQAVGRRVVDLLVPPSKENEELDILARIARKEQVVSFDTVRRHQDGHL 430 Query: 138 KHVLTTYIPDVNEQGEVNGFYVVAHDVTEITHNRNQLSEALAQNQSLPDQVQQS------ 191 V T P + G V G D++ ++ E N L Q+ + Sbjct: 431 LDVAVTVSPILGPDGGVVGASKTVRDISAKKAAEARIREL---NTGLEHQIAERTAELRR 487 Query: 192 -NALLNNVLSSATGVAIIATAPDGVITLFNRGAERMLGYRAEDVIGQMK------EETFS 244 N LL +VL +A+ V+II DG+I+ FN GAERMLGYRA++V+G+ E Sbjct: 488 LNVLLGSVLQAASEVSIITLDRDGIISGFNLGAERMLGYRADEVVGKASPTLLHSERELL 547 Query: 245 GR---LNHPAIRAPAPLDEKAVSDLR---YRRKDGVTLPVTRQQTSMLDHRQRHIGDLYI 298 R L R E+ ++ R Y RKDG L VT T + D G L I Sbjct: 548 ARGQELGEEGFRVLVARAEQEGAETREWTYLRKDGSPLSVTLSVTVLRDEAGAINGYLGI 607 Query: 299 AMDMSLQRQQEAELAATRDQLMLAAEVAKLGVWVWDRTGDTFEFNRQIAEIYGIGDGRSG 358 A+D++ R E E+AA RDQL +AA+VA+LG+W W+ D+ ++N ++ E+YG Sbjct: 608 AVDVTEWRNAEREMAAARDQLQMAADVARLGIWRWNLADDSLQWNERMCELYGQPLALRD 667 Query: 359 QVTTYEGWRRRVHPDDVGYVESALQAALAGTGEFEPVFRVVRADGSIRFVQARAHVDRNG 418 YE WR R+HP+D+ E++L+AA+ G G ++ +FRVV DG IRF+QA A V+R+ Sbjct: 668 GGLVYEHWRSRLHPEDLERTEASLRAAVEGRGNYDVIFRVVLPDGGIRFIQAGAQVERDA 727 Query: 419 MGAPVRVIGINLDITQRIEFENNLVEARLKAEQANSAKSLFLASVSHEIRTPMNGVLGMI 478 G P++V GIN+DIT + + L EA+ +A+ A++AKS FLA++SHEIRTPMN VLGM+ Sbjct: 728 DGNPLQVTGINIDITSDQQLQARLREAKEQADAASAAKSSFLANMSHEIRTPMNAVLGML 787 Query: 479 QLLQRTQPQPAQQDYLDKAEISAKSLLNLLNDLLDFSKMDAQQVQLDLQAFSLEHFRHDL 538 QL ++T Q+DYLDKA +A SLL LLND+LD+SK++A ++ L++ F LE DL Sbjct: 788 QLARQTDLNERQRDYLDKASSAATSLLGLLNDILDYSKIEAGKLVLEMLPFELEPLMQDL 847 Query: 539 TAILAGNPPQEGVSLHIELDGDLPQRVVGDVYRLQQVLVNLISNALKFTHLGRIDVALRR 598 +L+GN + V + ++D +LP VVGD RLQQ+L+NL NALKFT G + V+LRR Sbjct: 848 AVVLSGNQGDKDVEVIFDIDPELPSAVVGDRLRLQQILINLAGNALKFTARGHVLVSLRR 907 Query: 599 LAADNTRQVMLRVEVSDTGIGIAPERLKDIFDAFTQAEASTTRRYGGTGLGLAISRHLVQ 658 LA D V LRV V+DTGIGI+ E+ + IF+ FTQAEAST+RR+GGTGLGL I + LV Sbjct: 908 LAHD-AHLVRLRVLVADTGIGISAEQQQRIFEGFTQAEASTSRRFGGTGLGLFICKRLVD 966 Query: 659 LMGGQLQVSSEPGRGSRFWFDLPMEIEDATPLSQARAADEHTQAEHAPAGETARELEGVQ 718 LMGG+L+V S PG GSRFWFDL +++ PL A AGE R Sbjct: 967 LMGGELRVESAPGSGSRFWFDLDLDVAHDQPLRAACPG----------AGEPLR------ 1010 Query: 719 ILLVEDNAVNRQVATGLLSLYGAHISCAENGSTGVA---MACDPERHYDLILMDLQMPGI 775 +L+ +DN V ++ + G C +GS VA A R YD++LMD +MP + Sbjct: 1011 LLVADDNLVAGELLERTVGALGWRADCVGSGSEAVARVQAAMAEGRRYDVVLMDWRMPDL 1070 Query: 776 DGIEATRRIRRQQDLRHIPILAMTANASPE---DRRRCIAAGMAGHIAKPIDVSTLVPTL 832 DG+ A + IR+ Q P++ M E D R A + KP+ L ++ Sbjct: 1071 DGLSAAQLIRQLQGDLPPPMVIMITAYGREVLADARDHSAPPFVDFLTKPVTPKQLADSV 1130 Query: 833 LSHLQHDRSIAA 844 L L ++ A Sbjct: 1131 LHALHGEQGAPA 1142 Score = 152 bits (384), Expect = 3e-34, Method: Composition-based stats. Identities = 105/270 (38%), Positives = 144/270 (53%), Gaps = 24/270 (8%) Query: 689 PLSQARAADEHTQAEH----APAG------ETARELEGVQILLVEDNAVNRQVATGLLSL 738 P++ + AD A H APA E + L GV++L+VEDNA+NRQVA LLS Sbjct: 1120 PVTPKQLADSVLHALHGEQGAPANPPPRPVERTQRLRGVRLLVVEDNALNRQVAAELLSS 1179 Query: 739 YGAHISCAENGSTGVAMACDPERHYDLILMDLQMPGIDGIEATRRIRRQQDLRHIPILAM 798 GA ++ A+ G GV + +D +LMD+QMP IDG+EATRRIR +PILAM Sbjct: 1180 EGARVALADGGLAGVQQVLEASVPFDAVLMDMQMPDIDGLEATRRIRADGRFAGLPILAM 1239 Query: 799 TANASPEDRRRCIAAGMAGHIAKPIDVSTLVPTLLSHLQH--DRSIAAQETLPAEATRVD 856 TANAS DR C+AAGM H+AKPID LV LL HL DR A AT D Sbjct: 1240 TANASLADREACLAAGMNDHVAKPIDKERLVLCLLGHLGRSGDRG--------APATTAD 1291 Query: 857 VQPADRQQVDVYADLMRRYRQASDVYRTTLDAAGPELERLFADYDAALAQASPGGIEQAA 916 + V+ D++ R+ + ++ L P+++ LFA + L + G Sbjct: 1292 AG----ELVEARGDIVGRFGGSLELIVQVLRRFVPDMQDLFAQLERQLGEGDVQGSAATL 1347 Query: 917 HALKGLCATIGASGLAAYFAGIERVCRAGE 946 H +KG +T+GAS LA + +E+ R + Sbjct: 1348 HTIKGSASTVGASALAGRASELEQALRRAD 1377