BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.4678.p (565 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777118.1| signal transduction protein containing senso... 785 0.0 ref|YP_004442948.1| putative transmembrane EAL domain protein [A... 484 e-134 gb|EGP56276.1| EAL domain-containing protein [Agrobacterium tume... 473 e-131 ref|ZP_03786827.1| EAL domain-containing protein [Brucella ceti ... 448 e-123 ref|ZP_06109026.1| EAL domain-containing protein [Brucella ceti ... 447 e-123 >ref|YP_003777118.1| signal transduction protein containing sensor and EAL domains protein [Herbaspirillum seropedicae SmR1] gb|ADJ65210.1| signal transduction protein containing sensor and EAL domains protein [Herbaspirillum seropedicae SmR1] Length = 544 Score = 785 bits (2028), Expect = 0.0, Method: Composition-based stats. Identities = 417/539 (77%), Positives = 472/539 (87%) Query: 24 VNNKNKVVVLTVIATIVAATVPVIGMLWLSRQAVIDSEHERLTRYAESVVDRAEATFQNT 83 ++NKN++V T++AT VAA PV M+WLSRQAV +EHERL RYAESV+ RA +F T Sbjct: 1 MSNKNRIVAWTIVATAVAAIAPVAAMMWLSRQAVAQAEHERLARYAESVIARAAHSFDET 60 Query: 84 QRALKSMSPLLLFPCSDEHIAQMRLIAVSSGAIEEMGYYEYGQLKCTSWDRRAQALRRPQ 143 QR+LKS+SPLLL PCSDEHIAQMRLI+V+S +IEEMGYYE+GQLKCTSWD A RR Q Sbjct: 61 QRSLKSLSPLLLLPCSDEHIAQMRLISVNSRSIEEMGYYEHGQLKCTSWDSSVGARRRRQ 120 Query: 144 PEAVFTTADGVGVALEQASYISDGPSMMSIQYGAHAALVHRERFVDVVLEDGVHVVLARN 203 E VFTTADGV VAL+Q S+++DGP+M+SIQYGAH+ALVHR RFVDVVLE GVHVVLARN Sbjct: 121 AEPVFTTADGVEVALDQRSFVADGPTMLSIQYGAHSALVHRLRFVDVVLEKGVHVVLARN 180 Query: 204 GFGLVAQYGMPIASGMAGRALRGVGNQDFDGFFVSTISRDGWTAAAIIDGQHVVETMTGE 263 GFG VAQYG P+A+G+A AL G+G QD DGFF+ST+SRDGWTAAAI+DG HV+E MTG+ Sbjct: 181 GFGPVAQYGGPVAAGVAEHALDGLGRQDVDGFFISTVSRDGWTAAAIVDGDHVLEEMTGQ 240 Query: 264 QRWFLPVGVLLALGLVMLVLRVSQARLSPLADLQLAVRKKEFIVCYQPIIELDSGRCVGA 323 QRWFLPVG+LL +GLVMLVLRVSQARLSPLADLQLAV+KKEFIV YQPIIE+ SGRC+GA Sbjct: 241 QRWFLPVGILLGIGLVMLVLRVSQARLSPLADLQLAVKKKEFIVHYQPIIEMASGRCIGA 300 Query: 324 EALIRWRRPDGSIVRPDLFIPLAEESGLILPLTDLVIETVVAELGAILRADRALHVAINV 383 EAL+RWRRPDGSIVRPD FI LAEESGLILPLTDLV++TVV E+ LR DRALH+AINV Sbjct: 301 EALLRWRRPDGSIVRPDFFIALAEESGLILPLTDLVVDTVVREMRDTLRQDRALHIAINV 360 Query: 384 AAQDIKTGRILEVVGKNLAGTDIRTEQLWMEATERGCMDIASARVTLARARELGHSMALD 443 AAQD+KTGRILEVV + LAG+DIR EQLWMEATERGCMDIASA +TLARARE+GHSMALD Sbjct: 361 AAQDMKTGRILEVVSQALAGSDIRPEQLWMEATERGCMDIASASLTLARAREMGHSMALD 420 Query: 444 DFGTGYSNLQYLQGLPMDALKIDKSFVSTIGTGAATSAVIDHIIAMAKSLNLFIVAEGVE 503 DFGTGYSNLQYLQGLPMDALKIDKSFVSTIGTGAATSAVIDHIIAMAKSL L+IVAEGVE Sbjct: 421 DFGTGYSNLQYLQGLPMDALKIDKSFVSTIGTGAATSAVIDHIIAMAKSLKLYIVAEGVE 480 Query: 504 TLEQAAYLGQHGVDFAQGWLFAKPLPAGEFIDFYRATLADYGTGPESIRSDRTDLASTP 562 TLEQAAYL + GVDFAQGWLF++PLP EF+ FY ATLADYG+GPE IR + +P Sbjct: 481 TLEQAAYLAERGVDFAQGWLFSRPLPVEEFVAFYCATLADYGSGPEIIRGPQPASTDSP 539 >ref|YP_004442948.1| putative transmembrane EAL domain protein [Agrobacterium sp. H13-3] gb|ADY65857.1| putative transmembrane EAL domain protein [Agrobacterium sp. H13-3] Length = 532 Score = 484 bits (1245), Expect = e-134, Method: Composition-based stats. Identities = 253/524 (48%), Positives = 346/524 (66%), Gaps = 3/524 (0%) Query: 29 KVVVLTVIATIVAATVPVIGMLWLSRQAVIDSEHERLTRYAESVVDRAEATFQNTQRALK 88 +V+ + + IV A +P+ M W S + I E L AE + RA TF+ Q AL+ Sbjct: 8 RVIAVGIFLAIVGAALPIAAMAWTSWRVAIQKELFILDLVAERSLVRAGNTFRQAQGALE 67 Query: 89 SMSPLLLFPCSDEHIAQMRLIAVSSGAIEEMGYYEYGQLKCTSWDRRAQALRRPQPEAVF 148 ++ CSD+HIAQMR++ ++ +IEE+GY+E G +KCTSW R A + + + + Sbjct: 68 AIETAHPPACSDQHIAQMRMVTINVPSIEEIGYFENGFIKCTSWGRAAGDVAKSHVD--Y 125 Query: 149 TTADGVGVALEQASYISDGPSMMSIQYGAHAALVHRERFVDVVLEDGVHVVLARNGFGLV 208 T DG+ V L IS G M S+ G H ALV RF D+VL DG+ + + + ++ Sbjct: 126 VTPDGLEVTLRIQPGISHGDQMTSLHLGHHNALVAPSRFADIVLRDGMSLAILNDKAAVI 185 Query: 209 AQYGMPIASGMAGRALRGVGNQDFDGFFVSTISRDGWTAAAIIDGQHVVETMTGEQRWFL 268 + +P +G+ G D + S + + TA + + + E L Sbjct: 186 STQNLP-DTGVLATLPTKEGQGTTDAWLYSVVKENALTAVVLEPRAALRTRLVRELTILL 244 Query: 269 PVGVLLALGLVMLVLRVSQARLSPLADLQLAVRKKEFIVCYQPIIELDSGRCVGAEALIR 328 P+G +AL +V +V+ +S+ RLSP +L++AV+ +EFIV YQPIIEL + CVGAEAL+R Sbjct: 245 PIGAFIALFIVGIVIWMSRKRLSPETELEIAVQNREFIVHYQPIIELKTNICVGAEALVR 304 Query: 329 WRRPDGSIVRPDLFIPLAEESGLILPLTDLVIETVVAELGAILRADRALHVAINVAAQDI 388 WRRPDG++VRPDLFIPLAEE+GLI P+TD V+E ++A+LG +L DR+ H+AIN+ A+D+ Sbjct: 305 WRRPDGTLVRPDLFIPLAEETGLIEPITDQVVEAIIADLGTMLVGDRSAHIAINLCAEDV 364 Query: 389 KTGRILEVVGKNLAGTDIRTEQLWMEATERGCMDIASARVTLARARELGHSMALDDFGTG 448 K+GRIL+ + + L DIR EQ+W+EATERG +DI +AR TL RAR+ GHS+A+DDFGTG Sbjct: 365 KSGRILDFIDQRLVRADIRKEQIWLEATERGFIDIDAARFTLDRARKAGHSVAIDDFGTG 424 Query: 449 YSNLQYLQGLPMDALKIDKSFVSTIGTGAATSAVIDHIIAMAKSLNLFIVAEGVETLEQA 508 YS+LQYLQGLP+DALKIDKSFV TIG ATS V HII MA+ L LF VAEG+E EQA Sbjct: 425 YSSLQYLQGLPLDALKIDKSFVDTIGRNTATSTVTLHIIEMARELGLFSVAEGIERPEQA 484 Query: 509 AYLGQHGVDFAQGWLFAKPLPAGEFIDFYRATLADYGTGPESIR 552 AYL +HGVDF QGWLF+KPLPA EFI F+R + YG+ PE I+ Sbjct: 485 AYLREHGVDFGQGWLFSKPLPADEFIAFHRKNKSTYGSAPEVIQ 528 >gb|EGP56276.1| EAL domain-containing protein [Agrobacterium tumefaciens F2] Length = 521 Score = 473 bits (1216), Expect = e-131, Method: Composition-based stats. Identities = 252/523 (48%), Positives = 345/523 (65%), Gaps = 9/523 (1%) Query: 33 LTVIATIVAATVPVIGMLWLSRQAVIDSEHERLTRYAESVVDRAEATFQNTQRALKSMSP 92 + + IV A +P+ M W S + I E L AE + RA TF+ + AL+++ Sbjct: 1 MGIFLAIVGAALPIAAMAWTSWRVAIQKELYILDLVAERSLVRAGNTFREAKGALEAIEA 60 Query: 93 LLLFPCSDEHIAQMRLIAVSSGAIEEMGYYEYGQLKCTSWDRRAQALRRPQPEAVFTTAD 152 L CSD+HIAQMR+ ++ +I E+GY+E G +KCTSW R A + + + + T + Sbjct: 61 AHLPACSDQHIAQMRIGTINVPSIAEIGYFENGFIKCTSWGRAAGNIAKSHVD--YVTPE 118 Query: 153 GVGVALEQASYISDGPSMMSIQYGAHAALVHRERFVDVVLEDGVHVVLARNGFGLVAQYG 212 G+ V L IS G M S+ G H ALV RF D+VL D + + L + +++ Sbjct: 119 GLEVTLRIQPGISHGDQMTSLHLGHHNALVAPSRFADIVLRDRMSLALLNDKGQIISTQN 178 Query: 213 MP---IASGMAGRALRGVGNQDFDGFFVSTISRDGWTAAAIIDGQHVVETMTGEQRWFLP 269 +P + S + + RG+ D S ++ DG TA + + + + E LP Sbjct: 179 LPDAGVLSALPAKDGRGMT----DTSLYSVVTEDGLTAIVLEPREAMRTKLVRELTVLLP 234 Query: 270 VGVLLALGLVMLVLRVSQARLSPLADLQLAVRKKEFIVCYQPIIELDSGRCVGAEALIRW 329 +G +AL +V +V+ +S+ RLSP +L++AVR +EFIV YQPIIEL + CVGAEAL+RW Sbjct: 235 IGAFIALFIVGIVIWMSRKRLSPETELEIAVRNREFIVHYQPIIELKTNICVGAEALVRW 294 Query: 330 RRPDGSIVRPDLFIPLAEESGLILPLTDLVIETVVAELGAILRADRALHVAINVAAQDIK 389 RRPDG++VRPD FIPLAEE+GLI P+TD V+E ++A+LG +L DR+ H+AIN+ A+D+K Sbjct: 295 RRPDGTLVRPDRFIPLAEETGLIEPITDQVVEAIIADLGPMLVRDRSSHIAINLCAEDVK 354 Query: 390 TGRILEVVGKNLAGTDIRTEQLWMEATERGCMDIASARVTLARARELGHSMALDDFGTGY 449 +GRIL+ + LA IR EQ+W+EATERG +DI +AR+TL RAR+ GHS+A+DDFGTGY Sbjct: 355 SGRILDFIDLRLARAGIRKEQIWLEATERGFIDIDAARITLDRARKAGHSVAIDDFGTGY 414 Query: 450 SNLQYLQGLPMDALKIDKSFVSTIGTGAATSAVIDHIIAMAKSLNLFIVAEGVETLEQAA 509 S+LQYLQGLP+DALKIDKSFV TIG ATS V HII MA+ L LF VAEG+E EQAA Sbjct: 415 SSLQYLQGLPLDALKIDKSFVDTIGRNTATSTVTLHIIEMARELGLFSVAEGIEKEEQAA 474 Query: 510 YLGQHGVDFAQGWLFAKPLPAGEFIDFYRATLADYGTGPESIR 552 YL +HGVDF QGWLF++PLPA EFI F+R + YG+ PE I+ Sbjct: 475 YLREHGVDFGQGWLFSRPLPAEEFIVFHRQNKSRYGSAPEVIQ 517 >ref|ZP_03786827.1| EAL domain-containing protein [Brucella ceti str. Cudo] ref|ZP_06794012.1| EAL protein [Brucella sp. NVSL 07-0026] ref|YP_004757559.1| EAL domain-containing protein [Brucella pinnipedialis B2/94] gb|EEH13687.1| EAL domain-containing protein [Brucella ceti str. Cudo] gb|EFG35995.1| EAL protein [Brucella sp. NVSL 07-0026] gb|AEK55791.1| EAL domain protein [Brucella pinnipedialis B2/94] Length = 594 Score = 448 bits (1153), Expect = e-123, Method: Composition-based stats. Identities = 239/534 (44%), Positives = 331/534 (61%), Gaps = 3/534 (0%) Query: 31 VVLTVIATIVAATVPVIGMLWLSRQAVIDSEHERLTRYAESVVDRAEATFQNTQRALKSM 90 ++ T + A P + ++ S E +LT +A ++R + TF +AL Sbjct: 7 LIATFACIVFAIIAPALAAVYTSSVVAAHREQIQLTLFATYAIERTDTTFSGVSQALMQT 66 Query: 91 SPLLLFPCSDEHIAQMRLIAVSSGAIEEMGYYEYGQLKCTSWDRRAQALRRPQPEAVFTT 150 L PCS EH+ ++ IA+ + I E+GY++ G LKCTSW + P FTT Sbjct: 67 QMLTDKPCSKEHMDDLKRIAIETRPITEIGYFDDGLLKCTSWGMAGMRVAAGTP--AFTT 124 Query: 151 ADGVGVALEQASYISDGPSMMSIQYGAHAALVHRERFVDVVLEDGVHVVLARNGFGLVAQ 210 +GV V L + I +M+ +Q GA+ L+ + FVD ++ GV + +A +VA Sbjct: 125 RNGVKVVLNMTASIPTTANMLGLQRGAYCILIDPKWFVDEIVPKGVQIAVASPDGTVVAA 184 Query: 211 YGMPIASGMAGRALRGVGNQDFDGFFVSTISRDGWTAAAIIDGQHVVETMTGEQRWFLPV 270 P + + L+ + + + + WTA AI + +M E FLP+ Sbjct: 185 LNHP-DPAVIRQFLKPSDTKPPSRYLGAVVRGSDWTAIAITPRASIWTSMQEELLVFLPI 243 Query: 271 GVLLALGLVMLVLRVSQARLSPLADLQLAVRKKEFIVCYQPIIELDSGRCVGAEALIRWR 330 +++ G+V+L + +S+ RLS +L +A+R++EF V YQP+IEL +G CVGAEAL+RWR Sbjct: 244 AGVISTGMVILTIWLSRRRLSLRGELAIAIRRREFTVVYQPLIELKTGICVGAEALVRWR 303 Query: 331 RPDGSIVRPDLFIPLAEESGLILPLTDLVIETVVAELGAILRADRALHVAINVAAQDIKT 390 RPDG++V PDLFIP+AE S +I +T+ V+ V +LG +L AD ALHVAIN+AA D+ Sbjct: 304 RPDGAMVMPDLFIPIAENSKMISQITEQVVANTVRDLGDVLAADEALHVAINMAADDLAQ 363 Query: 391 GRILEVVGKNLAGTDIRTEQLWMEATERGCMDIASARVTLARARELGHSMALDDFGTGYS 450 GRIL VV + + GT IRTEQ+W+EATERG MD S R + +ARELGHS+A+DDFGTGYS Sbjct: 364 GRILTVVQRAIRGTGIRTEQIWLEATERGFMDPKSTRTIIEKARELGHSIAIDDFGTGYS 423 Query: 451 NLQYLQGLPMDALKIDKSFVSTIGTGAATSAVIDHIIAMAKSLNLFIVAEGVETLEQAAY 510 +L YLQ LP+D LKIDKSF+ST+GT +ATS + HIIAMAKSL+L IVAEG+E EQA Y Sbjct: 424 SLHYLQELPVDTLKIDKSFISTLGTDSATSPIAAHIIAMAKSLDLIIVAEGIERQEQADY 483 Query: 511 LGQHGVDFAQGWLFAKPLPAGEFIDFYRATLADYGTGPESIRSDRTDLASTPLN 564 L HGV F QGWL++ PLPA EFI+FY+A A G GP IR T +S P N Sbjct: 484 LIAHGVQFGQGWLYSPPLPAQEFIEFYKAQKATKGAGPAIIRKKSTHKSSRPEN 537 >ref|ZP_06109026.1| EAL domain-containing protein [Brucella ceti M490/95/1] gb|EEZ06927.1| EAL domain-containing protein [Brucella ceti M490/95/1] Length = 594 Score = 447 bits (1151), Expect = e-123, Method: Composition-based stats. Identities = 239/534 (44%), Positives = 331/534 (61%), Gaps = 3/534 (0%) Query: 31 VVLTVIATIVAATVPVIGMLWLSRQAVIDSEHERLTRYAESVVDRAEATFQNTQRALKSM 90 ++ T + A P + ++ S E +LT +A ++R + TF +AL Sbjct: 7 LIATFACIVFAIIAPALAAVYTSSVVAAHREQIQLTLFATYAIERTDTTFSGVSQALMQT 66 Query: 91 SPLLLFPCSDEHIAQMRLIAVSSGAIEEMGYYEYGQLKCTSWDRRAQALRRPQPEAVFTT 150 L PCS EH+ ++ IA+ + I E+GY++ G LKCTSW + P FTT Sbjct: 67 QMLTDKPCSKEHMDDLKRIAIETRPITEIGYFDDGLLKCTSWGMAGMRVAAGTP--AFTT 124 Query: 151 ADGVGVALEQASYISDGPSMMSIQYGAHAALVHRERFVDVVLEDGVHVVLARNGFGLVAQ 210 +GV V L + I +M+ +Q GA+ L+ + FVD ++ GV + +A +VA Sbjct: 125 RNGVKVVLNMTASIPTTANMLGLQRGAYCILIDPKWFVDEIVPKGVQIAVASPDGTVVAA 184 Query: 211 YGMPIASGMAGRALRGVGNQDFDGFFVSTISRDGWTAAAIIDGQHVVETMTGEQRWFLPV 270 P + + L+ + + + + WTA AI + +M E FLP+ Sbjct: 185 LNHP-DPAVIRQFLKPSDTKPPSRYLGAVVRGSDWTAIAITPRASIWTSMQEELLVFLPI 243 Query: 271 GVLLALGLVMLVLRVSQARLSPLADLQLAVRKKEFIVCYQPIIELDSGRCVGAEALIRWR 330 +++ G+V+L + +S+ RLS +L +A+R++EF V YQP+IEL +G CVGAEAL+RWR Sbjct: 244 AGVISTGMVILTIWLSRRRLSLRGELAIAIRRREFTVVYQPLIELKTGICVGAEALVRWR 303 Query: 331 RPDGSIVRPDLFIPLAEESGLILPLTDLVIETVVAELGAILRADRALHVAINVAAQDIKT 390 RPDG++V PDLFIP+AE S +I +T+ V+ V +LG +L AD ALHVAIN+AA D+ Sbjct: 304 RPDGAMVMPDLFIPIAENSKVISQITEQVVANTVRDLGDVLAADEALHVAINMAADDLAQ 363 Query: 391 GRILEVVGKNLAGTDIRTEQLWMEATERGCMDIASARVTLARARELGHSMALDDFGTGYS 450 GRIL VV + + GT IRTEQ+W+EATERG MD S R + +ARELGHS+A+DDFGTGYS Sbjct: 364 GRILTVVQRAIRGTGIRTEQIWLEATERGFMDPKSTRTIIEKARELGHSIAIDDFGTGYS 423 Query: 451 NLQYLQGLPMDALKIDKSFVSTIGTGAATSAVIDHIIAMAKSLNLFIVAEGVETLEQAAY 510 +L YLQ LP+D LKIDKSF+ST+GT +ATS + HIIAMAKSL+L IVAEG+E EQA Y Sbjct: 424 SLHYLQELPVDTLKIDKSFISTLGTDSATSPIAAHIIAMAKSLDLIIVAEGIERQEQADY 483 Query: 511 LGQHGVDFAQGWLFAKPLPAGEFIDFYRATLADYGTGPESIRSDRTDLASTPLN 564 L HGV F QGWL++ PLPA EFI+FY+A A G GP IR T +S P N Sbjct: 484 LIAHGVQFGQGWLYSPPLPAQEFIEFYKAQKATKGAGPAIIRKKSTHKSSRPEN 537