BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.4677.p         (275 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003775810.1| hemerythrin protein [Herbaspirillum seropedi...   117   1e-24
ref|YP_001100597.1| hypothetical protein HEAR2344 [Herminiimonas...    73   4e-11
gb|ABK64032.1| putative hemerythrin-like protein [Janthinobacter...    64   2e-08
ref|YP_001230098.1| hemerythrin-like metal-binding protein [Geob...    60   2e-07
ref|YP_003523501.1| hemerythrin-like metal-binding protein [Side...    60   4e-07

>ref|YP_003775810.1| hemerythrin protein [Herbaspirillum seropedicae SmR1]
 gb|ADJ63902.1| hemerythrin protein [Herbaspirillum seropedicae SmR1]
          Length = 135

 Score =  117 bits (294), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 58/122 (47%), Positives = 80/122 (65%)

Query: 144 SNGLAQRIPALLAEMDAEHREVLESVAALAIVPPAGFASAYAALVAQIETGFREEEKMMD 203
           S    +RI A + EM  EH+ +LE  A LA+VPPA FA  YA L+ +IE  FR EE +M+
Sbjct: 2   STSTQERIFAEIEEMVREHQLILEEFARLAVVPPAEFAPVYAGLLGRIEADFRAEESIME 61

Query: 204 EMGYSDLRAHRRDHAELLALLHRLRPYLDDGNAPLADIVMGMIPAMLVRHMAGMDQALAL 263
           ++ Y DL+ H RDHA LL +LH+ RPY+D+G+   A+++   +P MLV HM  MD  LA 
Sbjct: 62  QIDYPDLQNHLRDHAGLLGILHKARPYIDEGDMSFAEMIRASMPMMLVHHMNSMDMLLAD 121

Query: 264 AL 265
           A+
Sbjct: 122 AI 123


>ref|YP_001100597.1| hypothetical protein HEAR2344 [Herminiimonas arsenicoxydans]
 emb|CAL62475.1| Conserved hypothetical protein, putative hemerythrin binding domain
           [Herminiimonas arsenicoxydans]
          Length = 154

 Score = 73.2 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 40/116 (34%), Positives = 61/116 (52%)

Query: 155 LAEMDAEHREVLESVAALAIVPPAGFASAYAALVAQIETGFREEEKMMDEMGYSDLRAHR 214
           + EMD  H+ ++  + +L  VP   F      LV  +E  FR EE++M+ M Y +LRAHR
Sbjct: 14  IIEMDKAHKVLMREIMSLMQVPNFEFVRRLPHLVELLEMDFRIEEQLMESMDYPELRAHR 73

Query: 215 RDHAELLALLHRLRPYLDDGNAPLADIVMGMIPAMLVRHMAGMDQALALALRVRAA 270
             HA LL  +H+      +G+  L   V+ M+P  L+ H+  MD     AL++  A
Sbjct: 74  EQHAGLLGAMHQALAKAMNGDYQLPRQVLNMLPQWLLWHLVKMDAPFVKALKIAGA 129


>gb|ABK64032.1| putative hemerythrin-like protein [Janthinobacterium lividum]
          Length = 132

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/101 (30%), Positives = 54/101 (53%)

Query: 158 MDAEHREVLESVAALAIVPPAGFASAYAALVAQIETGFREEEKMMDEMGYSDLRAHRRDH 217
           +D  H  + + +A L  +    F+ A+  L+A +E  FREEE +M+++ +  L  HR  H
Sbjct: 17  IDEAHEALFQELARLGQLSDQRFSVAFRELIAAVERDFREEEDLMEQIAFPSLANHREQH 76

Query: 218 AELLALLHRLRPYLDDGNAPLADIVMGMIPAMLVRHMAGMD 258
           A +L+ LH     +D+G+       + ++P  L+ H A MD
Sbjct: 77  ARVLSGLHHAWAAVDEGDLEQGRHALSLLPQWLIFHQATMD 117


>ref|YP_001230098.1| hemerythrin-like metal-binding protein [Geobacter uraniireducens
           Rf4]
 gb|ABQ25525.1| hemerythrin-like metal-binding protein [Geobacter uraniireducens
           Rf4]
          Length = 135

 Score = 60.5 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/114 (29%), Positives = 55/114 (48%), Gaps = 5/114 (4%)

Query: 155 LAEMDAEHREVLESVAALAIVPPAG-----FASAYAALVAQIETGFREEEKMMDEMGYSD 209
           + +MD +H++++E +  L      G           ALV+  +T F  EE +M   GY  
Sbjct: 14  VKQMDEQHKKLVEMINQLHDAMKVGQGKQVVGDVLNALVSYTKTHFANEESLMKTYGYPG 73

Query: 210 LRAHRRDHAELLALLHRLRPYLDDGNAPLADIVMGMIPAMLVRHMAGMDQALAL 263
               ++ HA L+  +  ++    DGNAPL+  VM  +   LV+H+ G DQ   L
Sbjct: 74  YEDQKKAHANLVGQVGDIQKKFLDGNAPLSQDVMTFLKEWLVKHIQGADQKYGL 127


>ref|YP_003523501.1| hemerythrin-like metal-binding protein [Sideroxydans lithotrophicus
           ES-1]
 gb|ADE11114.1| hemerythrin-like metal-binding protein [Sideroxydans lithotrophicus
           ES-1]
          Length = 131

 Score = 60.1 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 39/113 (34%), Positives = 53/113 (46%), Gaps = 1/113 (0%)

Query: 155 LAEMDAEHREVLESVAALAIVPPAGFASAYAALVAQIETGFREEEKMMDEMGYSDLRAHR 214
           +AE+D  HR+ +  VAAL     A F + +  LVA     F  E K+M E  Y  L  H 
Sbjct: 17  MAEIDGVHRDFITQVAALISASDAEFPALFQTLVAHTREHFIAEGKLMRESRYQGLGVHE 76

Query: 215 RDHAELLALLHRLRPYLDDGNAPLADI-VMGMIPAMLVRHMAGMDQALALALR 266
            +H  +L  L +L   L  G  PL    V   +P     H+A MD AL + L+
Sbjct: 77  SEHHRVLGELQQLNRSLKRGRLPLVRAYVKEGLPEWFDTHLAMMDTALGMHLK 129