BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.4660.p (368 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777105.1| hypothetical protein Hsero_3719 [Herbaspiril... 382 e-104 emb|CCA87155.1| conserved exported hypothetical protein [Ralston... 77 5e-12 ref|YP_003750553.1| hypothetical protein RPSI07_mp1635 [Ralstoni... 72 2e-10 ref|ZP_00942650.1| Hypothetical Protein RRSL_04652 [Ralstonia so... 71 3e-10 ref|YP_002257268.1| hypothetical protein RSIPO_03570 [Ralstonia ... 71 3e-10 >ref|YP_003777105.1| hypothetical protein Hsero_3719 [Herbaspirillum seropedicae SmR1] gb|ADJ65197.1| hypothetical protein Hsero_3719 [Herbaspirillum seropedicae SmR1] Length = 252 Score = 382 bits (981), Expect = e-104, Method: Composition-based stats. Identities = 215/256 (83%), Positives = 233/256 (91%), Gaps = 4/256 (1%) Query: 113 MSASRTWLLAAGTLLLTTACSTPEERMAKLQIKQQRLEIKAQQAAQRNEARNELRTKVQA 172 MSASRTWLLAA TLLLTTACSTPEERMAKLQIKQQRLEIKAQQAAQRNE + +K Q Sbjct: 1 MSASRTWLLAAATLLLTTACSTPEERMAKLQIKQQRLEIKAQQAAQRNE----VISKAQG 56 Query: 173 SAVTDQRGPYENVIKALASCDASFAATLRQFSGSLPPAFVVTLKGPVASIDVPDRRTPGS 232 +AV DQR P+ENV+KALA+CDASFAATL QF +L PAFVVT KG +ASIDVPDRRTPG Sbjct: 57 AAVIDQRAPFENVLKALANCDASFAATLGQFPEALSPAFVVTRKGKIASIDVPDRRTPGR 116 Query: 233 NRIAAAGSAQAYGQTLSGYYDERTESNGQLQKMSWGFYSPATPEQLAKVLGAAIPNFKRT 292 +R+AAAGSA AYGQTLS YYDE E NGQ QK+SWGFYSP+TPEQLA++LGAAIPNFKRT Sbjct: 117 DRVAAAGSALAYGQTLSAYYDESVEINGQPQKISWGFYSPSTPEQLARILGAAIPNFKRT 176 Query: 293 SRELDGNYVRMEIFDRGGWHRTTRFDYYRGQSNVLGERTLVIEPSRDPSFPGSRIGCSVR 352 SREL+GNYVRMEIFDRGGWHRTTRFDYYRGQ+NVLGERTLVIEPSRDP+FPGSRIGCSVR Sbjct: 177 SRELNGNYVRMEIFDRGGWHRTTRFDYYRGQANVLGERTLVIEPSRDPAFPGSRIGCSVR 236 Query: 353 GAQVAQFQDELRPEVD 368 G+QVAQFQDELRPEVD Sbjct: 237 GSQVAQFQDELRPEVD 252 >emb|CCA87155.1| conserved exported hypothetical protein [Ralstonia syzygii R24] Length = 213 Score = 77.0 bits (188), Expect = 5e-12, Method: Composition-based stats. Identities = 59/189 (31%), Positives = 92/189 (48%), Gaps = 4/189 (2%) Query: 181 PYENVIKALASCDASFAATLRQFSGSLPP-AFVVTLKGPVASIDVPDRRTPGSNRIAAAG 239 P ++ AL+SC F A + +L A V G VA I VPDR ++ + + Sbjct: 27 PAGTLVGALSSCQKEFFAAIGAKREALSALATVKQRAGGVAFIAVPDRDKEDASAVRFSA 86 Query: 240 SAQAYGQTLSGYYDERTESNGQLQKMSWGFYSPATPEQLAKVLGAAIPNFKRTSRELDGN 299 Q G L Y+DE + + +WGF P + +AK + A I KR R +G Sbjct: 87 PYQDAGVPLIAYFDEVRDIGALGKYYAWGFIVPGKLDDIAKQVTARIAESKRL-RSTEGV 145 Query: 300 YVRMEIFDRGGWHRTTRFDYYRGQSNVLGERTLVIEPSRDPSFPGS-RIGCSVRGAQVAQ 358 YVR +++ G W + + ER L+IE + +P+FPG+ RIGCS++G+ A+ Sbjct: 146 YVRSDLWKDGHWQADDQLAGDAPPAPGTVERVLLIEDA-EPTFPGAVRIGCSLQGSVTAE 204 Query: 359 FQDELRPEV 367 RP++ Sbjct: 205 MLASERPDL 213 >ref|YP_003750553.1| hypothetical protein RPSI07_mp1635 [Ralstonia solanacearum PSI07] emb|CBJ35954.1| conserved exported protein of unknown function [Ralstonia solanacearum PSI07] Length = 213 Score = 71.6 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 56/189 (29%), Positives = 90/189 (47%), Gaps = 4/189 (2%) Query: 181 PYENVIKALASCDASFAATLRQFSGSLPP-AFVVTLKGPVASIDVPDRRTPGSNRIAAAG 239 P ++ AL+SC F A + +L A V G VA I VPDR ++ + + Sbjct: 27 PAGTLVGALSSCQKEFFAAIGAKREALSALATVKQRAGGVAFIAVPDRDKEDASAVRFSA 86 Query: 240 SAQAYGQTLSGYYDERTESNGQLQKMSWGFYSPATPEQLAKVLGAAIPNFKRTSRELDGN 299 Q G + Y+DE + + +WGF P +++A + I KR R +G Sbjct: 87 PYQDAGVPVIAYFDEVRDIGALGKYYAWGFIVPGKLDEVAGQVAPRIAESKRL-RSTEGV 145 Query: 300 YVRMEIFDRGGWHRTTRFDYYRGQSNVLGERTLVIEPSRDPSFPGS-RIGCSVRGAQVAQ 358 YVR +++ G W + + ER L+IE + P+FPG+ RIGCS++G+ A+ Sbjct: 146 YVRSDLWKDGHWQTDDQLAGDTPPAPGTVERVLLIEEA-GPAFPGAVRIGCSLQGSVTAE 204 Query: 359 FQDELRPEV 367 RP++ Sbjct: 205 MLASERPDL 213 >ref|ZP_00942650.1| Hypothetical Protein RRSL_04652 [Ralstonia solanacearum UW551] gb|EAP74789.1| Hypothetical Protein RRSL_04652 [Ralstonia solanacearum UW551] Length = 212 Score = 71.2 bits (173), Expect = 3e-10, Method: Composition-based stats. Identities = 58/189 (30%), Positives = 89/189 (47%), Gaps = 4/189 (2%) Query: 181 PYENVIKALASCDASFAATLRQFSGSLPP-AFVVTLKGPVASIDVPDRRTPGSNRIAAAG 239 P ++I AL+SC A + +L A V G VA I VPDR ++ + + Sbjct: 26 PAGSLIGALSSCRKDIFAAIGARQEALSALATVKQRAGGVAFIAVPDRDKEDASAVRFSA 85 Query: 240 SAQAYGQTLSGYYDERTESNGQLQKMSWGFYSPATPEQLAKVLGAAIPNFKRTSRELDGN 299 Q G L Y+DE + + +WGF P + +A+ + I KR R +G Sbjct: 86 PYQDAGVPLIAYFDEVRDIGALGKYYAWGFIVPGKLDDVARQVAPRIAESKRL-RATEGV 144 Query: 300 YVRMEIFDRGGWHRTTRFDYYRGQSNVLGERTLVIEPSRDPSFPGS-RIGCSVRGAQVAQ 358 YVR E + G W + + ER L+IE + +P FPG+ RIGCS++G+ A+ Sbjct: 145 YVRSEQWKDGHWQADDQLTGDTPPAPGTVERVLLIEDA-EPGFPGAVRIGCSLQGSVTAE 203 Query: 359 FQDELRPEV 367 RP++ Sbjct: 204 MLATERPDL 212 >ref|YP_002257268.1| hypothetical protein RSIPO_03570 [Ralstonia solanacearum IPO1609] emb|CAQ59152.1| conserved hypothetical protein [Ralstonia solanacearum IPO1609] Length = 205 Score = 70.9 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 58/189 (30%), Positives = 89/189 (47%), Gaps = 4/189 (2%) Query: 181 PYENVIKALASCDASFAATLRQFSGSLPP-AFVVTLKGPVASIDVPDRRTPGSNRIAAAG 239 P ++I AL+SC A + +L A V G VA I VPDR ++ + + Sbjct: 19 PAGSLIGALSSCRKDIFAAIGARQEALSALATVKQRAGGVAFIAVPDRDKEDASAVRFSA 78 Query: 240 SAQAYGQTLSGYYDERTESNGQLQKMSWGFYSPATPEQLAKVLGAAIPNFKRTSRELDGN 299 Q G L Y+DE + + +WGF P + +A+ + I KR R +G Sbjct: 79 PYQDAGVPLIAYFDEVRDIGALGKYYAWGFIVPGKLDDVARQVAPRIAESKRL-RATEGV 137 Query: 300 YVRMEIFDRGGWHRTTRFDYYRGQSNVLGERTLVIEPSRDPSFPGS-RIGCSVRGAQVAQ 358 YVR E + G W + + ER L+IE + +P FPG+ RIGCS++G+ A+ Sbjct: 138 YVRSEQWKDGHWQADDQLTGDTPPAPGTVERVLLIEDA-EPGFPGAVRIGCSLQGSVTAE 196 Query: 359 FQDELRPEV 367 RP++ Sbjct: 197 MLATERPDL 205