BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.4653.p (427 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777099.1| hypothetical protein Hsero_3713 [Herbaspiril... 294 2e-77 gb|ADU90646.1| hypothetical protein CCT_ORF03616 [Collimonas sp.... 198 1e-48 ref|YP_004752554.1| hypothetical protein CFU_1899 [Collimonas fu... 189 9e-46 ref|ZP_08273481.1| hypothetical protein IMCC9480_1375 [Oxalobact... 171 3e-40 ref|YP_586522.1| Phospho-N-acetylmuramoyl-pentapeptide-transfera... 94 4e-17 >ref|YP_003777099.1| hypothetical protein Hsero_3713 [Herbaspirillum seropedicae SmR1] gb|ADJ65191.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1] Length = 189 Score = 294 bits (753), Expect = 2e-77, Method: Composition-based stats. Identities = 163/188 (86%), Positives = 175/188 (93%) Query: 239 MKPSRLLAAVSAATLLLLGGCVSPPPPDTRPSARLSLRLPPAALGQDISLQQHLTVERGN 298 MKP+ LLAA SAA +LLLGGC SP PDTRPSARLSLRL PAALGQ ISLQQHL VERG+ Sbjct: 1 MKPTLLLAAASAAMILLLGGCASPVTPDTRPSARLSLRLAPAALGQSISLQQHLKVERGS 60 Query: 299 RVDQLDTALEIDASHVDLVGLAFGQRVMSLHYDGQQLQVWRHPMLPSQVQGEDVLQDVQL 358 R+D+LDTALEIDA H+DLVGLAFGQRVMSLH+DG+QLQVWRH +LPSQVQGEDVLQDVQL Sbjct: 61 RIDELDTALEIDAEHLDLVGLAFGQRVMSLHFDGRQLQVWRHALLPSQVQGEDVLQDVQL 120 Query: 359 TLWPADAIRQALPEGWELREARAQRTLLLHGETIAVIDYPDQRRWGGKVILNNLRYHYKL 418 TLWPA+AIRQALPEGWELREA+AQRTLLLHGE IAVIDYPDQRRWGG VILNNLRYHYKL Sbjct: 121 TLWPAEAIRQALPEGWELREAQAQRTLLLHGEKIAVIDYPDQRRWGGTVILNNLRYHYKL 180 Query: 419 TIQSVVTA 426 TIQSVVT+ Sbjct: 181 TIQSVVTS 188 >gb|ADU90646.1| hypothetical protein CCT_ORF03616 [Collimonas sp. MPS11E8] Length = 197 Score = 198 bits (504), Expect = 1e-48, Method: Composition-based stats. Identities = 106/159 (66%), Positives = 126/159 (79%) Query: 265 PDTRPSARLSLRLPPAALGQDISLQQHLTVERGNRVDQLDTALEIDASHVDLVGLAFGQR 324 P ++ ARL L++ PA+LG +ISLQQHLTVER RVDQLD ALEID +++VGLAFGQR Sbjct: 19 PASQAPARLGLKMAPASLGANISLQQHLTVERNGRVDQLDAALEIDQQQLNMVGLAFGQR 78 Query: 325 VMSLHYDGQQLQVWRHPMLPSQVQGEDVLQDVQLTLWPADAIRQALPEGWELREARAQRT 384 V+SLHYDGQ LQ WRHPMLPSQV+ EDVL+D+QLTLWP AIRQALP GW + + QRT Sbjct: 79 VLSLHYDGQTLQSWRHPMLPSQVRAEDVLEDMQLTLWPVAAIRQALPAGWAIEQQGLQRT 138 Query: 385 LLLHGETIAVIDYPDQRRWGGKVILNNLRYHYKLTIQSV 423 L L GET+ VI+Y W GKV L+NLRYHY+LTI+SV Sbjct: 139 LSLQGETVTVINYSTPTPWDGKVELDNLRYHYRLTIESV 177 >ref|YP_004752554.1| hypothetical protein CFU_1899 [Collimonas fungivorans Ter331] gb|AEK61731.1| conserved hypothetical protein [Collimonas fungivorans Ter331] Length = 206 Score = 189 bits (479), Expect = 9e-46, Method: Composition-based stats. Identities = 103/173 (59%), Positives = 124/173 (71%), Gaps = 1/173 (0%) Query: 256 LGGCVSPPPPDTRPS-ARLSLRLPPAALGQDISLQQHLTVERGNRVDQLDTALEIDASHV 314 L C + P + ARL L L PA+LG ISLQQHLTVER R+DQLD A+E+D Sbjct: 26 LAACTTTQPQAPATALARLGLMLAPASLGASISLQQHLTVERQGRIDQLDAAVEVDQQQF 85 Query: 315 DLVGLAFGQRVMSLHYDGQQLQVWRHPMLPSQVQGEDVLQDVQLTLWPADAIRQALPEGW 374 ++VGLAFGQRV+S++YDG+ LQ WRHPMLPSQV+ EDV++D QLTLWP AIR ALP GW Sbjct: 86 NMVGLAFGQRVLSMNYDGKTLQSWRHPMLPSQVRVEDVMEDTQLTLWPLAAIRAALPPGW 145 Query: 375 ELREARAQRTLLLHGETIAVIDYPDQRRWGGKVILNNLRYHYKLTIQSVVTAA 427 ++ + +RTL L GE + VIDY W GKV LNNLRYHY LTI+SV AA Sbjct: 146 QIEQQGLRRTLSLQGEPVMVIDYSTPTPWDGKVELNNLRYHYHLTIESVSDAA 198 >ref|ZP_08273481.1| hypothetical protein IMCC9480_1375 [Oxalobacteraceae bacterium IMCC9480] gb|EGF33044.1| hypothetical protein IMCC9480_1375 [Oxalobacteraceae bacterium IMCC9480] Length = 183 Score = 171 bits (432), Expect = 3e-40, Method: Composition-based stats. Identities = 87/156 (55%), Positives = 115/156 (73%) Query: 272 RLSLRLPPAALGQDISLQQHLTVERGNRVDQLDTALEIDASHVDLVGLAFGQRVMSLHYD 331 RL LRL PAALG+ I++QQHL VER R+D+LD ALE+DA + LVGLAFGQRV+++ YD Sbjct: 28 RLGLRLAPAALGERIAVQQHLQVERAGRIDELDAALEVDADQLQLVGLAFGQRVLTVAYD 87 Query: 332 GQQLQVWRHPMLPSQVQGEDVLQDVQLTLWPADAIRQALPEGWELREARAQRTLLLHGET 391 G+ L WRHPMLP+QV+ +DVL+D+QL LWP AIR ALP GW++ + +RT+ +HG Sbjct: 88 GRTLTSWRHPMLPAQVRADDVLEDIQLALWPLAAIRAALPPGWQIEDDGLRRTVSMHGVI 147 Query: 392 IAVIDYPDQRRWGGKVILNNLRYHYKLTIQSVVTAA 427 +VI+ RW G + L N RY Y+LTIQS T++ Sbjct: 148 FSVIEVSKLPRWQGNITLENRRYQYRLTIQSAPTSS 183 >ref|YP_586522.1| Phospho-N-acetylmuramoyl-pentapeptide-transferase [Cupriavidus metallidurans CH34] gb|ABF11253.1| putative Phospho-N-acetylmuramoyl-pentapeptide-transferase [Cupriavidus metallidurans CH34] Length = 190 Score = 94.4 bits (233), Expect = 4e-17, Method: Composition-based stats. Identities = 65/170 (38%), Positives = 97/170 (57%), Gaps = 11/170 (6%) Query: 258 GCVSPPPPDTRPSARLSLRLPPAALGQDISLQQHLTVE----RGNRVDQLDTALEIDASH 313 GC + P TR L LRLPPA+LG+ +SLQQ +TV+ +G + + LE DA+H Sbjct: 21 GCATVAP--TRAEVPL-LRLPPASLGRTLSLQQQITVQFPSPQGEQTRDMIAMLEADAAH 77 Query: 314 VDLVGLAFGQRVMSLHYDGQQLQVWRHPMLPSQVQGEDVLQDVQLTLWPADAIRQALPEG 373 L +A GQ + + +DG+ L+V R P P ++ E +L D+QL+LWP +AI+ ALP+G Sbjct: 78 TRLAAVAGGQVLARIDWDGRDLRVTRAPWAPRELMPERILSDLQLSLWPVEAIQAALPDG 137 Query: 374 WELREARAQRTLLLHGETIAVIDYPDQRRWGGKVILNNLRYHYKLTIQSV 423 W + A R L E +A + YPD + R Y+LTI+++ Sbjct: 138 WHVDATPAMRVLRYGDEVVAEVRYPD----ATTTLFTQRRDGYRLTIRTL 183