BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.4650.p         (71 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003777097.1| hypothetical protein Hsero_3711 [Herbaspiril...    97   6e-19
gb|ADU90649.1| putative outer membrane lipoprotein carrier prote...    85   4e-15
ref|YP_004752551.1| putative transmembrane protein [Collimonas f...    84   6e-15

>ref|YP_003777097.1| hypothetical protein Hsero_3711 [Herbaspirillum seropedicae SmR1]
 gb|ADJ65189.1| conserved hypothetical signal peptide protein [Herbaspirillum
           seropedicae SmR1]
          Length = 203

 Score = 97.4 bits (241), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 46/70 (65%), Positives = 60/70 (85%)

Query: 2   AAIRNGNWNVALKAREPGLAKAIGDIRLEGGAFVNKVIMQEASGDHTEIVFSAIQTGDKA 61
            ++R+G+W VALKAR+P LAKAIGDI L G ++V+KV M+EASGD T+I FSAI+TG+ A
Sbjct: 134 GSLRDGHWQVALKARQPALAKAIGDISLAGASYVDKVSMKEASGDRTDISFSAIKTGEGA 193

Query: 62  MSAEEGAMFD 71
           M+AEEGA+FD
Sbjct: 194 MTAEEGALFD 203


>gb|ADU90649.1| putative outer membrane lipoprotein carrier protein LolA
           [Collimonas sp. MPS11E8]
          Length = 205

 Score = 84.7 bits (208), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 40/70 (57%), Positives = 52/70 (74%)

Query: 2   AAIRNGNWNVALKAREPGLAKAIGDIRLEGGAFVNKVIMQEASGDHTEIVFSAIQTGDKA 61
            +++  +W VAL AR+P LAKAIG + L GGA+V  V + EASGDHTEI FS +Q+G  A
Sbjct: 136 GSVQGNSWKVALTARQPALAKAIGTLALTGGAYVKTVTISEASGDHTEISFSDLQSGSSA 195

Query: 62  MSAEEGAMFD 71
           M+AEEGA F+
Sbjct: 196 MTAEEGAAFE 205


>ref|YP_004752551.1| putative transmembrane protein [Collimonas fungivorans Ter331]
 gb|AEK61728.1| Putative transmembrane protein [Collimonas fungivorans Ter331]
          Length = 205

 Score = 84.0 bits (206), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 40/70 (57%), Positives = 52/70 (74%)

Query: 2   AAIRNGNWNVALKAREPGLAKAIGDIRLEGGAFVNKVIMQEASGDHTEIVFSAIQTGDKA 61
            +++  +W VALKAR+P LAKAIG + L GGA+V  V + EASGD T+I FS +Q+G  A
Sbjct: 136 GSVQGNSWKVALKARQPALAKAIGTLALSGGAYVKTVTISEASGDRTDISFSELQSGSNA 195

Query: 62  MSAEEGAMFD 71
           M+AEEGA FD
Sbjct: 196 MTAEEGAAFD 205