BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.4642.p (188 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777091.1| transmembrane protein [Herbaspirillum serope... 257 5e-67 ref|YP_004752545.1| hypothetical protein CFU_1890 [Collimonas fu... 160 1e-37 gb|ADU90655.1| putative transmembrane protein [Collimonas sp. MP... 159 1e-37 ref|ZP_08275011.1| putative transmembrane protein [Oxalobacterac... 150 1e-34 ref|ZP_08486443.1| hypothetical protein MetalDRAFT_3168 [Methylo... 140 1e-31 >ref|YP_003777091.1| transmembrane protein [Herbaspirillum seropedicae SmR1] gb|ADJ65183.1| transmembrane protein [Herbaspirillum seropedicae SmR1] Length = 188 Score = 257 bits (657), Expect = 5e-67, Method: Composition-based stats. Identities = 173/188 (92%), Positives = 179/188 (95%) Query: 1 MKPPAMSRLASLAGPLLILLYPLLIWYAHGKLEPRLLALLLVLIAAVRLFTSRTGRPLRW 60 MKPPAM RLA+LAGPLLILLYPLLIWYAHGKLEPR LAL LVLIA VRLF +RTG PLRW Sbjct: 1 MKPPAMPRLATLAGPLLILLYPLLIWYAHGKLEPRTLALSLVLIAVVRLFATRTGGPLRW 60 Query: 61 MGVAALALAAPALLWNALLPLKLYPVAISAGMLALFGYSLYKPPTVIERMARLSSPDLPL 120 MGVAALALAAPA+ WNALLPLKLYPVAISAGMLALFGYSLYKPPTVIERMARL SPDLPL Sbjct: 61 MGVAALALAAPAVYWNALLPLKLYPVAISAGMLALFGYSLYKPPTVIERMARLGSPDLPL 120 Query: 121 FVVAYTRRVTQVWCLFFAVNGSIALGTALWASPAVWSMYTGVISYLAMGLLFAGEYLVRL 180 FV+AYTRRVTQVWCLFFA+NGSIALGTALW SPAVWSMYTGVISY+AMGLLFAGEYLVRL Sbjct: 121 FVIAYTRRVTQVWCLFFAINGSIALGTALWCSPAVWSMYTGVISYIAMGLLFAGEYLVRL 180 Query: 181 YVRRQHHA 188 YVRRQHHA Sbjct: 181 YVRRQHHA 188 >ref|YP_004752545.1| hypothetical protein CFU_1890 [Collimonas fungivorans Ter331] gb|AEK61722.1| hypothetical protein CFU_1890 [Collimonas fungivorans Ter331] Length = 201 Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats. Identities = 111/169 (65%), Positives = 130/169 (76%) Query: 9 LASLAGPLLILLYPLLIWYAHGKLEPRLLALLLVLIAAVRLFTSRTGRPLRWMGVAALAL 68 L ++ LL LLYPL IW HG++EPRLLALLLVL AA RL + R RW AL L Sbjct: 12 LPTVVSVLLTLLYPLAIWLGHGRVEPRLLALLLVLAAASRLPALKLRRGSRWWLAGALLL 71 Query: 69 AAPALLWNALLPLKLYPVAISAGMLALFGYSLYKPPTVIERMARLSSPDLPLFVVAYTRR 128 AA A+ NALLPLKLYPV ++ GMLA+FGYSL+ PP+VIERMARLS P LP + VAYTRR Sbjct: 72 AALAIWNNALLPLKLYPVLVNLGMLAVFGYSLHAPPSVIERMARLSDPALPAYAVAYTRR 131 Query: 129 VTQVWCLFFAVNGSIALGTALWASPAVWSMYTGVISYLAMGLLFAGEYL 177 VTQVWC FF VNG++AL TA+WAS AVWS+Y GV++Y+ MG LFAGEYL Sbjct: 132 VTQVWCGFFVVNGALALLTAVWASAAVWSLYNGVLAYVLMGCLFAGEYL 180 >gb|ADU90655.1| putative transmembrane protein [Collimonas sp. MPS11E8] Length = 201 Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats. Identities = 108/169 (63%), Positives = 128/169 (75%) Query: 9 LASLAGPLLILLYPLLIWYAHGKLEPRLLALLLVLIAAVRLFTSRTGRPLRWMGVAALAL 68 L ++ L+ LLYPL IW HG++EPRLLALLLVL AA RL + R RW AL L Sbjct: 8 LPTVMSLLVTLLYPLAIWLGHGRVEPRLLALLLVLAAATRLPALKLSRASRWWLAGALLL 67 Query: 69 AAPALLWNALLPLKLYPVAISAGMLALFGYSLYKPPTVIERMARLSSPDLPLFVVAYTRR 128 AA A+ NALLPLKLYPV ++ GML +FGYSLY PP++IERMARLS P LP + VAYTRR Sbjct: 68 AAVAIWNNALLPLKLYPVLVNLGMLTVFGYSLYAPPSIIERMARLSDPALPAYAVAYTRR 127 Query: 129 VTQVWCLFFAVNGSIALGTALWASPAVWSMYTGVISYLAMGLLFAGEYL 177 VTQVWC FF VNG +AL TA+WAS A+WS+Y GV++Y+ MG LFAGEYL Sbjct: 128 VTQVWCGFFVVNGVLALLTAIWASAAIWSLYNGVLAYMLMGCLFAGEYL 176 >ref|ZP_08275011.1| putative transmembrane protein [Oxalobacteraceae bacterium IMCC9480] gb|EGF31511.1| putative transmembrane protein [Oxalobacteraceae bacterium IMCC9480] Length = 174 Score = 150 bits (378), Expect = 1e-34, Method: Composition-based stats. Identities = 101/173 (58%), Positives = 123/173 (71%) Query: 16 LLILLYPLLIWYAHGKLEPRLLALLLVLIAAVRLFTSRTGRPLRWMGVAALALAAPALLW 75 L+ LLYPL IW HG++EPR LA LL+L AA RL + R RW AL LA A+ Sbjct: 2 LITLLYPLAIWLGHGRIEPRWLAGLLLLAAATRLPSLPVSRVARWSMAGALLLAVAAVWS 61 Query: 76 NALLPLKLYPVAISAGMLALFGYSLYKPPTVIERMARLSSPDLPLFVVAYTRRVTQVWCL 135 N +LPLKLYPV +SA +LA F YSL PP+++ER+ARL PDLP + YTRRVTQVWC Sbjct: 62 NLMLPLKLYPVLVSAALLAAFAYSLAVPPSMVERLARLREPDLPAAAIGYTRRVTQVWCG 121 Query: 136 FFAVNGSIALGTALWASPAVWSMYTGVISYLAMGLLFAGEYLVRLYVRRQHHA 188 FF VNG++ALGTALWAS A+WS+YTGVI+Y MG LF E+L R+ +R HH Sbjct: 122 FFIVNGALALGTALWASEALWSLYTGVIAYGLMGALFGAEWLCRMRFKRLHHG 174 >ref|ZP_08486443.1| hypothetical protein MetalDRAFT_3168 [Methylomicrobium album BG8] gb|EGL02530.1| hypothetical protein MetalDRAFT_3168 [Methylomicrobium album BG8] Length = 183 Score = 140 bits (352), Expect = 1e-31, Method: Composition-based stats. Identities = 92/185 (49%), Positives = 119/185 (64%), Gaps = 5/185 (2%) Query: 6 MSRLASLAGPLLILLYPLLIWYAHGKLEPRLLALLLVLIAAVRLFTSRTGRPLR--WMGV 63 M ++ LL++ YP +++ EP +A LL+ + A+RL +GR L V Sbjct: 1 MRLFTNIVLSLLVIAYPFAVYFGIRYFEPWKIAALLIGVLALRL-ACGSGRALGNGPAAV 59 Query: 64 AALALAAPALLWNALLPLKLYPVAISAGMLALFGYSLYKPPTVIERMARLSSPDLPLFVV 123 A + A+ N LL L+ YPV ++ ML LF +SL +PPTVIER+ARL PDLP V Sbjct: 60 AGILFCGLAVWRNDLLTLRFYPVVMNGAMLMLFAWSLIRPPTVIERLARLRHPDLPPAGV 119 Query: 124 AYTRRVTQVWCLFFAVNGSIALGTALWASPAVWSMYTGVISYLAMGLLFAGEYLVRLYVR 183 AYTRRVTQVWC FF +NG IAL TALW+S VWS+Y G+I+YL MG+LFAGEY VR +R Sbjct: 120 AYTRRVTQVWCGFFVLNGGIALATALWSSFEVWSLYNGLIAYLLMGVLFAGEYGVR--IR 177 Query: 184 RQHHA 188 Q HA Sbjct: 178 TQKHA 182